RNA–Protein interactions for RNA: ENST00000411913.1

HMGB3P2-201, Transcript of high mobility group box 3 pseudogene 2, humanhuman

BASIC

Gene HMGB3P2, Length 584 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P2-201ENST00000411913 LOC100509620A0A075B734 347 aa2.39□□□□□ -2.03
HMGB3P2-201ENST00000411913 IGHV4OR15-8A0A075B7B6 117 aa2.39□□□□□ -2.03
HMGB3P2-201ENST00000411913 GOLGA6L7A0A1B0GV03 622 aa2.39□□□□□ -2.03
HMGB3P2-201ENST00000411913 A0A1B0GVL5 298 aa2.39□□□□□ -2.03
HMGB3P2-201ENST00000411913 A0A1W2PNU3 283 aaPredicted RBP2.39□□□□□ -2.03
HMGB3P2-201ENST00000411913 GLOD5A6NK44 160 aa2.39□□□□□ -2.03
HMGB3P2-201ENST00000411913 F8VZ95 297 aa2.39□□□□□ -2.03
HMGB3P2-201ENST00000411913 PSMD14O00487 310 aa2.39□□□□□ -2.03
HMGB3P2-201ENST00000411913 NDUFAB1O14561 156 aa2.39□□□□□ -2.03
HMGB3P2-201ENST00000411913 PAPSS1O43252 624 aaPredicted RBP2.39□□□□□ -2.03
HMGB3P2-201ENST00000411913 ADAM20O43506 726 aa2.39□□□□□ -2.03
HMGB3P2-201ENST00000411913 TRAPPC3O43617 180 aa2.39□□□□□ -2.03
HMGB3P2-201ENST00000411913 DKC1O60832 514 aaKnown RBP eCLIP2.39□□□□□ -2.03
HMGB3P2-201ENST00000411913 MITFO75030 526 aaPredicted RBP2.39□□□□□ -2.03
HMGB3P2-201ENST00000411913 TPPPO94811 219 aa2.39□□□□□ -2.03
HMGB3P2-201ENST00000411913 KIAA0754O94854 1291 aa2.39□□□□□ -2.03
HMGB3P2-201ENST00000411913 ANP32DO95626 131 aa2.39□□□□□ -2.03
HMGB3P2-201ENST00000411913 BAG3O95817 575 aa2.39□□□□□ -2.03
HMGB3P2-201ENST00000411913 FTCDO95954 541 aa2.39□□□□□ -2.03
HMGB3P2-201ENST00000411913 HIST1H2ABP04908 130 aa2.39□□□□□ -2.03
HMGB3P2-201ENST00000411913 TSPY4P0CV99 314 aa2.39□□□□□ -2.03
HMGB3P2-201ENST00000411913 TSPY10P0CW01 314 aa2.39□□□□□ -2.03
HMGB3P2-201ENST00000411913 IDO1P14902 403 aa2.39□□□□□ -2.03
HMGB3P2-201ENST00000411913 HIST1H2ADP20671 130 aa2.39□□□□□ -2.03
HMGB3P2-201ENST00000411913 MAOAP21397 527 aa2.39□□□□□ -2.03
HMGB3P2-201ENST00000411913 RRM1P23921 792 aa2.39□□□□□ -2.03
HMGB3P2-201ENST00000411913 ACADLP28330 430 aa2.39□□□□□ -2.03
HMGB3P2-201ENST00000411913 MDH1P40925 334 aaKnown RBP2.39□□□□□ -2.03
HMGB3P2-201ENST00000411913 PRCPP42785 496 aa2.39□□□□□ -2.03
HMGB3P2-201ENST00000411913 NRIP1P48552 1158 aa2.39□□□□□ -2.03
HMGB3P2-201ENST00000411913 MXI1P50539 228 aa2.39□□□□□ -2.03
HMGB3P2-201ENST00000411913 PNLIPRP2P54317 469 aa2.39□□□□□ -2.03
HMGB3P2-201ENST00000411913 PSMC6P62333 389 aa2.39□□□□□ -2.03
HMGB3P2-201ENST00000411913 MRPS34P82930 218 aaKnown RBP2.39□□□□□ -2.03
HMGB3P2-201ENST00000411913 GRIK2Q13002 908 aa2.39□□□□□ -2.03
HMGB3P2-201ENST00000411913 ITGB3BPQ13352 177 aaPredicted RBP2.39□□□□□ -2.03
HMGB3P2-201ENST00000411913 DYNC1I2Q13409 638 aaKnown RBP2.39□□□□□ -2.03
HMGB3P2-201ENST00000411913 CUL3Q13618 768 aa2.39□□□□□ -2.03
HMGB3P2-201ENST00000411913 BAATQ14032 418 aaPredicted RBP2.39□□□□□ -2.03
HMGB3P2-201ENST00000411913 BTG3Q14201 252 aaPredicted RBP2.39□□□□□ -2.03
HMGB3P2-201ENST00000411913 C15orf59Q2T9L4 293 aaPredicted RBP2.39□□□□□ -2.03
HMGB3P2-201ENST00000411913 TWISTNBQ3B726 338 aaPredicted RBP2.39□□□□□ -2.03
HMGB3P2-201ENST00000411913 RARS2Q5T160 578 aaKnown RBP2.39□□□□□ -2.03
HMGB3P2-201ENST00000411913 LRIF1Q5T3J3 769 aa2.39□□□□□ -2.03
HMGB3P2-201ENST00000411913 SFMBT2Q5VUG0 894 aa2.39□□□□□ -2.03
HMGB3P2-201ENST00000411913 ARMC3Q5W041 872 aa2.39□□□□□ -2.03
HMGB3P2-201ENST00000411913 GGNBP1Q5YKI7 109 aa2.39□□□□□ -2.03
HMGB3P2-201ENST00000411913 ADALQ6DHV7 355 aa2.39□□□□□ -2.03
HMGB3P2-201ENST00000411913 HIST2H2BDQ6DRA6 164 aa2.39□□□□□ -2.03
HMGB3P2-201ENST00000411913 SIGIRRQ6IA17 410 aa2.39□□□□□ -2.03
HMGB3P2-201ENST00000411913 ANKRD54Q6NXT1 300 aa2.39□□□□□ -2.03
HMGB3P2-201ENST00000411913 SLC30A6Q6NXT4 461 aa2.39□□□□□ -2.03
HMGB3P2-201ENST00000411913 RPUSD3Q6P087 351 aaKnown RBP2.39□□□□□ -2.03
HMGB3P2-201ENST00000411913 RAD9BQ6WBX8 426 aa2.39□□□□□ -2.03
HMGB3P2-201ENST00000411913 FOXL2NBQ6ZUU3 175 aa2.39□□□□□ -2.03
HMGB3P2-201ENST00000411913 DPPA4Q7L190 304 aa2.39□□□□□ -2.03
HMGB3P2-201ENST00000411913 HIST3H2AQ7L7L0 130 aa2.39□□□□□ -2.03
HMGB3P2-201ENST00000411913 APTXQ7Z2E3 356 aaKnown RBP2.39□□□□□ -2.03
HMGB3P2-201ENST00000411913 CACNA2D4Q7Z3S7 1137 aa2.39□□□□□ -2.03
HMGB3P2-201ENST00000411913 KRT77Q7Z794 578 aa2.39□□□□□ -2.03
HMGB3P2-201ENST00000411913 NLRP14Q86W24 1093 aa2.39□□□□□ -2.03
HMGB3P2-201ENST00000411913 DNAAF5Q86Y56 855 aa2.39□□□□□ -2.03
HMGB3P2-201ENST00000411913 MCEMP1Q8IX19 187 aa2.39□□□□□ -2.03
HMGB3P2-201ENST00000411913 SPATA6LQ8N4H0 392 aa2.39□□□□□ -2.03
HMGB3P2-201ENST00000411913 MMGT1Q8N4V1 131 aa2.39□□□□□ -2.03
HMGB3P2-201ENST00000411913 AFAP1Q8N556 730 aa2.39□□□□□ -2.03
HMGB3P2-201ENST00000411913 SYT2Q8N9I0 419 aaPredicted RBP2.39□□□□□ -2.03
HMGB3P2-201ENST00000411913 SMYD1Q8NB12 490 aa2.39□□□□□ -2.03
HMGB3P2-201ENST00000411913 ARRDC2Q8TBH0 407 aa2.39□□□□□ -2.03
HMGB3P2-201ENST00000411913 TAS1R2Q8TE23 839 aa2.39□□□□□ -2.03
HMGB3P2-201ENST00000411913 TRPC4APQ8TEL6 797 aa2.39□□□□□ -2.03
HMGB3P2-201ENST00000411913 CCDC12Q8WUD4 166 aaPredicted RBP2.39□□□□□ -2.03
HMGB3P2-201ENST00000411913 PRPF31Q8WWY3 499 aaKnown RBP2.39□□□□□ -2.03
HMGB3P2-201ENST00000411913 LZICQ8WZA0 190 aa2.39□□□□□ -2.03
HMGB3P2-201ENST00000411913 IRGQQ8WZA9 623 aa2.39□□□□□ -2.03
HMGB3P2-201ENST00000411913 TRIB2Q92519 343 aa2.39□□□□□ -2.03
HMGB3P2-201ENST00000411913 ERGIC1Q969X5 290 aa2.39□□□□□ -2.03
HMGB3P2-201ENST00000411913 MOAP1Q96BY2 351 aa2.39□□□□□ -2.03
HMGB3P2-201ENST00000411913 PPP1R14BQ96C90 147 aa2.39□□□□□ -2.03
HMGB3P2-201ENST00000411913 STAMBPL1Q96FJ0 436 aa2.39□□□□□ -2.03
HMGB3P2-201ENST00000411913 SRSF8Q9BRL6 282 aaKnown RBP2.39□□□□□ -2.03
HMGB3P2-201ENST00000411913 LLPHQ9BRT6 129 aaKnown RBP2.39□□□□□ -2.03
HMGB3P2-201ENST00000411913 RBM4Q9BWF3 364 aaKnown RBP2.39□□□□□ -2.03
HMGB3P2-201ENST00000411913 MRPL1Q9BYD6 325 aaKnown RBP2.39□□□□□ -2.03
HMGB3P2-201ENST00000411913 LRRCC1Q9C099 1032 aa2.39□□□□□ -2.03
HMGB3P2-201ENST00000411913 OSGEPL1Q9H4B0 414 aa2.39□□□□□ -2.03
HMGB3P2-201ENST00000411913 MAGIXQ9H6Y5 334 aa2.39□□□□□ -2.03
HMGB3P2-201ENST00000411913 SLC28A3Q9HAS3 691 aa2.39□□□□□ -2.03
HMGB3P2-201ENST00000411913 ZNF334Q9HCZ1 680 aaPredicted RBP2.39□□□□□ -2.03
HMGB3P2-201ENST00000411913 GPR108Q9NPR9 543 aa2.39□□□□□ -2.03
HMGB3P2-201ENST00000411913 SLC35C2Q9NQQ7 365 aa2.39□□□□□ -2.03
HMGB3P2-201ENST00000411913 CWC25Q9NXE8 425 aaPredicted RBP2.39□□□□□ -2.03
HMGB3P2-201ENST00000411913 WSB2Q9NYS7 404 aaPredicted RBP2.39□□□□□ -2.03
HMGB3P2-201ENST00000411913 ATXN10Q9UBB4 475 aa2.39□□□□□ -2.03
HMGB3P2-201ENST00000411913 COPG2Q9UBF2 871 aa2.39□□□□□ -2.03
HMGB3P2-201ENST00000411913 CIDEBQ9UHD4 219 aa2.39□□□□□ -2.03
HMGB3P2-201ENST00000411913 DDX25Q9UHL0 483 aaKnown RBP2.39□□□□□ -2.03
HMGB3P2-201ENST00000411913 SLC12A6Q9UHW9 1150 aa2.39□□□□□ -2.03
HMGB3P2-201ENST00000411913 HOOK1Q9UJC3 728 aaKnown RBP2.39□□□□□ -2.03
HMGB3P2-201ENST00000411913 FBXW11Q9UKB1 542 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms