RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 SPATA13Q96N96 652 aa16.1■□□□□ 0.17
MRPL55-220ENST00000411464 ALS2CR12Q96Q35 445 aa16.1■□□□□ 0.17
MRPL55-220ENST00000411464 WDR77Q9BQA1 342 aaPredicted RBP16.1■□□□□ 0.17
MRPL55-220ENST00000411464 NLE1Q9NVX2 485 aaPredicted RBP16.1■□□□□ 0.17
MRPL55-220ENST00000411464 NTNG1Q9Y2I2 539 aa16.1■□□□□ 0.17
MRPL55-220ENST00000411464 H7C0S8 307 aa16.09■□□□□ 0.17
MRPL55-220ENST00000411464 QSOX1O00391 747 aa16.09■□□□□ 0.17
MRPL55-220ENST00000411464 FTH1P02794 183 aa16.09■□□□□ 0.17
MRPL55-220ENST00000411464 CTSBP07858 339 aa16.09■□□□□ 0.17
MRPL55-220ENST00000411464 PRSS56P0CW18 603 aa16.09■□□□□ 0.17
MRPL55-220ENST00000411464 RBP3P10745 1247 aa16.09■□□□□ 0.17
MRPL55-220ENST00000411464 ACADLP28330 430 aa16.09■□□□□ 0.17
MRPL55-220ENST00000411464 NSG1P42857 185 aa16.09■□□□□ 0.17
MRPL55-220ENST00000411464 PER3P56645 1201 aa16.09■□□□□ 0.17
MRPL55-220ENST00000411464 KIR2DS3Q14952 304 aa16.09■□□□□ 0.17
MRPL55-220ENST00000411464 AGAP7PQ5VUJ5 663 aa16.09■□□□□ 0.17
MRPL55-220ENST00000411464 PRAMEF13Q5VWM6 474 aa16.09■□□□□ 0.17
MRPL55-220ENST00000411464 CNGA4Q8IV77 575 aa16.09■□□□□ 0.17
MRPL55-220ENST00000411464 OR5K2Q8NHB8 316 aa16.09■□□□□ 0.17
MRPL55-220ENST00000411464 DNAJB14Q8TBM8 379 aa16.09■□□□□ 0.17
MRPL55-220ENST00000411464 DENND1AQ8TEH3 1009 aa16.09■□□□□ 0.17
MRPL55-220ENST00000411464 COG1Q8WTW3 980 aa16.09■□□□□ 0.17
MRPL55-220ENST00000411464 ELMO1Q92556 727 aa16.09■□□□□ 0.17
MRPL55-220ENST00000411464 DLG3Q92796 817 aa16.09■□□□□ 0.17
MRPL55-220ENST00000411464 CDKN2AIPNLQ96HQ2 116 aa16.09■□□□□ 0.17
MRPL55-220ENST00000411464 AGAP4Q96P64 663 aa16.09■□□□□ 0.17
MRPL55-220ENST00000411464 CDC23Q9UJX2 597 aa16.09■□□□□ 0.17
MRPL55-220ENST00000411464 FBXL4Q9UKA2 621 aa16.09■□□□□ 0.17
MRPL55-220ENST00000411464 EFR3BQ9Y2G0 817 aa16.09■□□□□ 0.17
MRPL55-220ENST00000411464 CCDC78A2IDD5 438 aa16.08■□□□□ 0.16
MRPL55-220ENST00000411464 AP2A1O95782 977 aa16.08■□□□□ 0.16
MRPL55-220ENST00000411464 PIM1P11309 404 aaPredicted RBP16.08■□□□□ 0.16
MRPL55-220ENST00000411464 TPH1P17752 444 aa16.08■□□□□ 0.16
MRPL55-220ENST00000411464 MMP11P24347 488 aa16.08■□□□□ 0.16
MRPL55-220ENST00000411464 TNFRSF8P28908 595 aa16.08■□□□□ 0.16
MRPL55-220ENST00000411464 ARSFP54793 590 aa16.08■□□□□ 0.16
MRPL55-220ENST00000411464 PLOD1Q02809 727 aaPredicted RBP16.08■□□□□ 0.16
MRPL55-220ENST00000411464 DBN1Q16643 649 aa16.08■□□□□ 0.16
MRPL55-220ENST00000411464 HIF1AQ16665 826 aa16.08■□□□□ 0.16
MRPL55-220ENST00000411464 SLC5A12Q1EHB4 618 aa16.08■□□□□ 0.16
MRPL55-220ENST00000411464 SYTL3Q4VX76 610 aa16.08■□□□□ 0.16
MRPL55-220ENST00000411464 C1QL3Q5VWW1 255 aa16.08■□□□□ 0.16
MRPL55-220ENST00000411464 C11orf63Q6NUN7 778 aa16.08■□□□□ 0.16
MRPL55-220ENST00000411464 TTLL10Q6ZVT0 673 aa16.08■□□□□ 0.16
MRPL55-220ENST00000411464 KCNMB4Q86W47 210 aa16.08■□□□□ 0.16
MRPL55-220ENST00000411464 SRRM1Q8IYB3 904 aaKnown RBP16.08■□□□□ 0.16
MRPL55-220ENST00000411464 PIANPQ8IYJ0 282 aa16.08■□□□□ 0.16
MRPL55-220ENST00000411464 FLVCR1-AS1Q8TAF5 88 aa16.08■□□□□ 0.16
MRPL55-220ENST00000411464 PPP4R1Q8TF05 950 aa16.08■□□□□ 0.16
MRPL55-220ENST00000411464 FAM118BQ9BPY3 351 aa16.08■□□□□ 0.16
MRPL55-220ENST00000411464 OSBPL8Q9BZF1 889 aa16.08■□□□□ 0.16
MRPL55-220ENST00000411464 EURLQ9NYK6 297 aa16.08■□□□□ 0.16
MRPL55-220ENST00000411464 NOVA2Q9UNW9 492 aaKnown RBP16.08■□□□□ 0.16
MRPL55-220ENST00000411464 OSGIN2Q9Y236 505 aa16.08■□□□□ 0.16
MRPL55-220ENST00000411464 HIVEP3Q5T1R4 2406 aa16.08■□□□□ 0.16
MRPL55-220ENST00000411464 LRBAP50851 2863 aa16.08■□□□□ 0.16
MRPL55-220ENST00000411464 PCSK5Q92824 1860 aa16.08■□□□□ 0.16
MRPL55-220ENST00000411464 SPTBP11277 2137 aa16.07■□□□□ 0.16
MRPL55-220ENST00000411464 AKR1B15C9JRZ8 316 aaPredicted RBP16.07■□□□□ 0.16
MRPL55-220ENST00000411464 LRRTM2O43300 516 aa16.07■□□□□ 0.16
MRPL55-220ENST00000411464 ZNF189O75820 626 aaPredicted RBP16.07■□□□□ 0.16
MRPL55-220ENST00000411464 TPBGLP0DKB5 382 aa16.07■□□□□ 0.16
MRPL55-220ENST00000411464 MICALCLQ6ZW33 695 aa16.07■□□□□ 0.16
MRPL55-220ENST00000411464 OVCH1Q7RTY7 1134 aa16.07■□□□□ 0.16
MRPL55-220ENST00000411464 MCATQ8IVS2 390 aaKnown RBP16.07■□□□□ 0.16
MRPL55-220ENST00000411464 STYXQ8WUJ0 223 aa16.07■□□□□ 0.16
MRPL55-220ENST00000411464 FKBP10Q96AY3 582 aa16.07■□□□□ 0.16
MRPL55-220ENST00000411464 VPS50Q96JG6 964 aa16.07■□□□□ 0.16
MRPL55-220ENST00000411464 SLC6A20Q9NP91 592 aa16.07■□□□□ 0.16
MRPL55-220ENST00000411464 SLC22A11Q9NSA0 550 aa16.07■□□□□ 0.16
MRPL55-220ENST00000411464 PLAGL1Q9UM63 463 aa16.07■□□□□ 0.16
MRPL55-220ENST00000411464 CSAG2Q9Y5P2 127 aa16.07■□□□□ 0.16
MRPL55-220ENST00000411464 PRSS21Q9Y6M0 314 aa16.07■□□□□ 0.16
MRPL55-220ENST00000411464 CACNA1DQ01668 2161 aa16.06■□□□□ 0.16
MRPL55-220ENST00000411464 A0A1B0GX78 115 aa16.06■□□□□ 0.16
MRPL55-220ENST00000411464 BHMG1C9JSJ3 638 aaPredicted RBP16.06■□□□□ 0.16
MRPL55-220ENST00000411464 PJA2O43164 708 aa16.06■□□□□ 0.16
MRPL55-220ENST00000411464 TJP3O95049 919 aa16.06■□□□□ 0.16
MRPL55-220ENST00000411464 ALBP02768 609 aa16.06■□□□□ 0.16
MRPL55-220ENST00000411464 OR56A5P0C7T3 313 aa16.06■□□□□ 0.16
MRPL55-220ENST00000411464 CETN2P41208 172 aa16.06■□□□□ 0.16
MRPL55-220ENST00000411464 TSFMP43897 325 aaKnown RBP16.06■□□□□ 0.16
MRPL55-220ENST00000411464 CDC16Q13042 620 aa16.06■□□□□ 0.16
MRPL55-220ENST00000411464 ITIH4Q14624 930 aa16.06■□□□□ 0.16
MRPL55-220ENST00000411464 POU6F1Q14863 301 aa16.06■□□□□ 0.16
MRPL55-220ENST00000411464 PARP6Q2NL67 630 aa16.06■□□□□ 0.16
MRPL55-220ENST00000411464 NAPRTQ6XQN6 538 aa16.06■□□□□ 0.16
MRPL55-220ENST00000411464 ARHGEF18Q6ZSZ5 1173 aa16.06■□□□□ 0.16
MRPL55-220ENST00000411464 TMEM151BQ8IW70 566 aa16.06■□□□□ 0.16
MRPL55-220ENST00000411464 GRHL3Q8TE85 626 aa16.06■□□□□ 0.16
MRPL55-220ENST00000411464 SLC22A18Q96BI1 424 aa16.06■□□□□ 0.16
MRPL55-220ENST00000411464 CNDP1Q96KN2 507 aa16.06■□□□□ 0.16
MRPL55-220ENST00000411464 EPS8L2Q9H6S3 715 aa16.06■□□□□ 0.16
MRPL55-220ENST00000411464 WDR54Q9H977 334 aa16.06■□□□□ 0.16
MRPL55-220ENST00000411464 MRM3Q9HC36 420 aaKnown RBP16.06■□□□□ 0.16
MRPL55-220ENST00000411464 PCDHA3Q9Y5H8 950 aa16.06■□□□□ 0.16
MRPL55-220ENST00000411464 SEC16AO15027 2179 aa16.05■□□□□ 0.16
MRPL55-220ENST00000411464 SLC5A10A0PJK1 596 aa16.05■□□□□ 0.16
MRPL55-220ENST00000411464 F8W8V4 182 aa16.05■□□□□ 0.16
MRPL55-220ENST00000411464 HNRNPRO43390 633 aaKnown RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms