RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 EFCAB3Q8N7B9 438 aa14.23□□□□□ -0.13
CBX3-203ENST00000409747 GSDMBQ8TAX9 411 aa14.23□□□□□ -0.13
CBX3-203ENST00000409747 MAIP1Q8WWC4 291 aa14.23□□□□□ -0.13
CBX3-203ENST00000409747 ZNF778Q96MU6 729 aa14.23□□□□□ -0.13
CBX3-203ENST00000409747 AP1M1Q9BXS5 423 aa14.23□□□□□ -0.13
CBX3-203ENST00000409747 FAM60AQ9NP50 221 aa14.23□□□□□ -0.13
CBX3-203ENST00000409747 TXLNGQ9NUQ3 528 aa14.23□□□□□ -0.13
CBX3-203ENST00000409747 IRAK4Q9NWZ3 460 aa14.23□□□□□ -0.13
CBX3-203ENST00000409747 SPHK1Q9NYA1 384 aa14.23□□□□□ -0.13
CBX3-203ENST00000409747 ZKSCAN5Q9Y2L8 839 aa14.23□□□□□ -0.13
CBX3-203ENST00000409747 PTPN13Q12923 2485 aa14.23□□□□□ -0.13
CBX3-203ENST00000409747 TTLL8A6PVC2 850 aa14.22□□□□□ -0.13
CBX3-203ENST00000409747 ZSCAN9O15535 394 aaPredicted RBP14.22□□□□□ -0.13
CBX3-203ENST00000409747 IGHEP01854 428 aa14.22□□□□□ -0.13
CBX3-203ENST00000409747 PKLRP30613 574 aa14.22□□□□□ -0.13
CBX3-203ENST00000409747 CCR7P32248 378 aa14.22□□□□□ -0.13
CBX3-203ENST00000409747 CSE1LP55060 971 aaKnown RBP14.22□□□□□ -0.13
CBX3-203ENST00000409747 MLLT10P55197 1068 aa14.22□□□□□ -0.13
CBX3-203ENST00000409747 DCDP81605 110 aaKnown RBP14.22□□□□□ -0.13
CBX3-203ENST00000409747 DEFB110Q30KQ9 67 aa14.22□□□□□ -0.13
CBX3-203ENST00000409747 MEI1Q5TIA1 1274 aa14.22□□□□□ -0.13
CBX3-203ENST00000409747 ZNF385CQ66K41 422 aaPredicted RBP14.22□□□□□ -0.13
CBX3-203ENST00000409747 DRICH1Q6PGQ1 229 aaPredicted RBP14.22□□□□□ -0.13
CBX3-203ENST00000409747 MPP5Q8N3R9 675 aa14.22□□□□□ -0.13
CBX3-203ENST00000409747 FLVCR1-AS1Q8TAF5 88 aa14.22□□□□□ -0.13
CBX3-203ENST00000409747 PANX3Q96QZ0 392 aa14.22□□□□□ -0.13
CBX3-203ENST00000409747 RAB11FIP5Q9BXF6 653 aa14.22□□□□□ -0.13
CBX3-203ENST00000409747 IL22Q9GZX6 179 aa14.22□□□□□ -0.13
CBX3-203ENST00000409747 INTS7Q9NVH2 962 aaKnown RBP14.22□□□□□ -0.13
CBX3-203ENST00000409747 NDOR1Q9UHB4 597 aa14.22□□□□□ -0.13
CBX3-203ENST00000409747 PLCL2Q9UPR0 1127 aa14.22□□□□□ -0.13
CBX3-203ENST00000409747 MRFAP1Q9Y605 127 aa14.22□□□□□ -0.13
CBX3-203ENST00000409747 PRMT5O14744 637 aaPredicted RBP14.21□□□□□ -0.13
CBX3-203ENST00000409747 DPM1O60762 260 aa14.21□□□□□ -0.13
CBX3-203ENST00000409747 VPS4BO75351 444 aa14.21□□□□□ -0.13
CBX3-203ENST00000409747 TPBGLP0DKB5 382 aa14.21□□□□□ -0.13
CBX3-203ENST00000409747 ETS1P14921 441 aa14.21□□□□□ -0.13
CBX3-203ENST00000409747 GABRA4P48169 554 aa14.21□□□□□ -0.13
CBX3-203ENST00000409747 ZIC1Q15915 447 aa14.21□□□□□ -0.13
CBX3-203ENST00000409747 TTC23LQ6PF05 361 aa14.21□□□□□ -0.13
CBX3-203ENST00000409747 LRRC6Q86X45 466 aa14.21□□□□□ -0.13
CBX3-203ENST00000409747 FAM26EQ8N5C1 309 aa14.21□□□□□ -0.13
CBX3-203ENST00000409747 ZBTB2Q8N680 514 aa14.21□□□□□ -0.13
CBX3-203ENST00000409747 GLIS1Q8NBF1 620 aa14.21□□□□□ -0.13
CBX3-203ENST00000409747 DENND1AQ8TEH3 1009 aa14.21□□□□□ -0.13
CBX3-203ENST00000409747 DLG3Q92796 817 aa14.21□□□□□ -0.13
CBX3-203ENST00000409747 NDC1Q9BTX1 674 aa14.21□□□□□ -0.13
CBX3-203ENST00000409747 GPR83Q9NYM4 423 aa14.21□□□□□ -0.13
CBX3-203ENST00000409747 IFT80Q9P2H3 777 aaPredicted RBP14.21□□□□□ -0.13
CBX3-203ENST00000409747 ANKMY1Q9P2S6 941 aa14.21□□□□□ -0.13
CBX3-203ENST00000409747 GNPTGQ9UJJ9 305 aa14.21□□□□□ -0.13
CBX3-203ENST00000409747 PLAGL1Q9UM63 463 aa14.21□□□□□ -0.13
CBX3-203ENST00000409747 VPS4AQ9UN37 437 aa14.21□□□□□ -0.13
CBX3-203ENST00000409747 SPTBP11277 2137 aa14.21□□□□□ -0.13
CBX3-203ENST00000409747 H3BMH7 237 aa14.21□□□□□ -0.14
CBX3-203ENST00000409747 KPNA5O15131 536 aa14.21□□□□□ -0.14
CBX3-203ENST00000409747 CD3EAPO15446 510 aaKnown RBP14.21□□□□□ -0.14
CBX3-203ENST00000409747 GPC4O75487 556 aa14.21□□□□□ -0.14
CBX3-203ENST00000409747 S1PR4O95977 384 aa14.21□□□□□ -0.14
CBX3-203ENST00000409747 FOLR3P41439 243 aa14.21□□□□□ -0.14
CBX3-203ENST00000409747 BASP1P80723 227 aaKnown RBP14.21□□□□□ -0.14
CBX3-203ENST00000409747 SEMA3AQ14563 771 aa14.21□□□□□ -0.14
CBX3-203ENST00000409747 SSPNQ14714 243 aa14.21□□□□□ -0.14
CBX3-203ENST00000409747 KYNUQ16719 465 aa14.21□□□□□ -0.14
CBX3-203ENST00000409747 MLIPQ5VWP3 458 aa14.21□□□□□ -0.14
CBX3-203ENST00000409747 PTRHD1Q6GMV3 140 aaKnown RBP14.21□□□□□ -0.14
CBX3-203ENST00000409747 GSTA5Q7RTV2 222 aa14.21□□□□□ -0.14
CBX3-203ENST00000409747 RAB42Q8N4Z0 105 aa14.21□□□□□ -0.14
CBX3-203ENST00000409747 COL26A1Q96A83 441 aa14.21□□□□□ -0.14
CBX3-203ENST00000409747 FER1L6-AS2Q96M78 137 aa14.21□□□□□ -0.14
CBX3-203ENST00000409747 GBP5Q96PP8 586 aa14.21□□□□□ -0.14
CBX3-203ENST00000409747 SPRTNQ9H040 489 aaPredicted RBP14.21□□□□□ -0.14
CBX3-203ENST00000409747 CHRAC1Q9NRG0 131 aa14.21□□□□□ -0.14
CBX3-203ENST00000409747 BFARQ9NZS9 450 aa14.21□□□□□ -0.14
CBX3-203ENST00000409747 SLC39A10Q9ULF5 831 aa14.21□□□□□ -0.14
CBX3-203ENST00000409747 CDYLQ9Y232 598 aa14.21□□□□□ -0.14
CBX3-203ENST00000409747 DRG1Q9Y295 367 aaKnown RBP14.21□□□□□ -0.14
CBX3-203ENST00000409747 TNRC6AQ8NDV7 1962 aaKnown RBP14.21□□□□□ -0.14
CBX3-203ENST00000409747 CLEC18AA5D8T8 446 aa14.2□□□□□ -0.14
CBX3-203ENST00000409747 KLHL41O60662 606 aa14.2□□□□□ -0.14
CBX3-203ENST00000409747 SLCO2B1O94956 709 aa14.2□□□□□ -0.14
CBX3-203ENST00000409747 FKBP9O95302 570 aa14.2□□□□□ -0.14
CBX3-203ENST00000409747 CBSLP0DN79 551 aa14.2□□□□□ -0.14
CBX3-203ENST00000409747 CD9P21926 228 aa14.2□□□□□ -0.14
CBX3-203ENST00000409747 AOAHP28039 575 aa14.2□□□□□ -0.14
CBX3-203ENST00000409747 PEBP1P30086 187 aaKnown RBP14.2□□□□□ -0.14
CBX3-203ENST00000409747 OTX2P32243 289 aa14.2□□□□□ -0.14
CBX3-203ENST00000409747 RPL22P35268 128 aaKnown RBP14.2□□□□□ -0.14
CBX3-203ENST00000409747 CBSP35520 551 aa14.2□□□□□ -0.14
CBX3-203ENST00000409747 SESN2P58004 480 aaPredicted RBP14.2□□□□□ -0.14
CBX3-203ENST00000409747 ATP1A4Q13733 1029 aa14.2□□□□□ -0.14
CBX3-203ENST00000409747 C1orf189Q5VU69 101 aa14.2□□□□□ -0.14
CBX3-203ENST00000409747 FAM69BQ5VUD6 431 aa14.2□□□□□ -0.14
CBX3-203ENST00000409747 CLEC18BQ6UXF7 455 aa14.2□□□□□ -0.14
CBX3-203ENST00000409747 MRGPREQ86SM8 312 aa14.2□□□□□ -0.14
CBX3-203ENST00000409747 PRUNE1Q86TP1 453 aa14.2□□□□□ -0.14
CBX3-203ENST00000409747 DNAJC22Q8N4W6 341 aa14.2□□□□□ -0.14
CBX3-203ENST00000409747 ZNF655Q8N720 491 aaPredicted RBP14.2□□□□□ -0.14
CBX3-203ENST00000409747 CLEC18CQ8NCF0 446 aa14.2□□□□□ -0.14
CBX3-203ENST00000409747 GALNT11Q8NCW6 608 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms