RNA–Protein interactions for RNA: ENST00000409469.5

CUL1-202, Transcript of cullin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUL1, Length 2,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL1-202ENST00000409469 RAET1GQ6H3X3 334 aa9.7□□□□□ -0.86
CUL1-202ENST00000409469 SYCE2Q6PIF2 218 aa9.7□□□□□ -0.86
CUL1-202ENST00000409469 DOK6Q6PKX4 331 aa9.7□□□□□ -0.86
CUL1-202ENST00000409469 TMEM220Q6QAJ8 160 aa9.7□□□□□ -0.86
CUL1-202ENST00000409469 CRTC3Q6UUV7 619 aa9.7□□□□□ -0.86
CUL1-202ENST00000409469 DPPA4Q7L190 304 aa9.7□□□□□ -0.86
CUL1-202ENST00000409469 TERB1Q8NA31 727 aa9.7□□□□□ -0.86
CUL1-202ENST00000409469 PLA2G15Q8NCC3 412 aa9.7□□□□□ -0.86
CUL1-202ENST00000409469 SPDYE1Q8NFV5 336 aaPredicted RBP9.7□□□□□ -0.86
CUL1-202ENST00000409469 GLYATL1Q969I3 302 aa9.7□□□□□ -0.86
CUL1-202ENST00000409469 MED8Q96G25 268 aa9.7□□□□□ -0.86
CUL1-202ENST00000409469 RSRC1Q96IZ7 334 aaKnown RBP9.7□□□□□ -0.86
CUL1-202ENST00000409469 MYADMQ96S97 322 aa9.7□□□□□ -0.86
CUL1-202ENST00000409469 FAM129BQ96TA1 746 aa9.7□□□□□ -0.86
CUL1-202ENST00000409469 OR2AG1Q9H205 316 aa9.7□□□□□ -0.86
CUL1-202ENST00000409469 SLC52A3Q9NQ40 469 aa9.7□□□□□ -0.86
CUL1-202ENST00000409469 TNPO3Q9Y5L0 923 aaKnown RBP9.7□□□□□ -0.86
CUL1-202ENST00000409469 V9GYQ6 96 aa9.7□□□□□ -0.86
CUL1-202ENST00000409469 COL6A3P12111 3177 aa9.7□□□□□ -0.86
CUL1-202ENST00000409469 LRRK1Q38SD2 2015 aa9.7□□□□□ -0.86
CUL1-202ENST00000409469 WNT9AO14904 365 aa9.69□□□□□ -0.86
CUL1-202ENST00000409469 AXIN1O15169 862 aa9.69□□□□□ -0.86
CUL1-202ENST00000409469 FKBP6O75344 327 aa9.69□□□□□ -0.86
CUL1-202ENST00000409469 AGR2O95994 175 aa9.69□□□□□ -0.86
CUL1-202ENST00000409469 C6P13671 934 aa9.69□□□□□ -0.86
CUL1-202ENST00000409469 NCK1P16333 377 aa9.69□□□□□ -0.86
CUL1-202ENST00000409469 GJA4P35212 333 aa9.69□□□□□ -0.86
CUL1-202ENST00000409469 ERVK-8P63133 956 aa9.69□□□□□ -0.86
CUL1-202ENST00000409469 MRPL28Q13084 256 aaKnown RBP9.69□□□□□ -0.86
CUL1-202ENST00000409469 TMED1Q13445 227 aa9.69□□□□□ -0.86
CUL1-202ENST00000409469 MAPRE2Q15555 327 aa9.69□□□□□ -0.86
CUL1-202ENST00000409469 MAP7D1Q3KQU3 841 aa9.69□□□□□ -0.86
CUL1-202ENST00000409469 SYTL3Q4VX76 610 aa9.69□□□□□ -0.86
CUL1-202ENST00000409469 SULT1C3Q6IMI6 304 aa9.69□□□□□ -0.86
CUL1-202ENST00000409469 BLOC1S3Q6QNY0 202 aa9.69□□□□□ -0.86
CUL1-202ENST00000409469 TRAPPC5Q8IUR0 188 aa9.69□□□□□ -0.86
CUL1-202ENST00000409469 RGL4Q8IZJ4 473 aa9.69□□□□□ -0.86
CUL1-202ENST00000409469 PGBD3Q8N328 593 aa9.69□□□□□ -0.86
CUL1-202ENST00000409469 KRTCAP2Q8N6L1 136 aa9.69□□□□□ -0.86
CUL1-202ENST00000409469 BTN2A2Q8WVV5 523 aa9.69□□□□□ -0.86
CUL1-202ENST00000409469 ASB11Q8WXH4 323 aa9.69□□□□□ -0.86
CUL1-202ENST00000409469 KLK6Q92876 244 aa9.69□□□□□ -0.86
CUL1-202ENST00000409469 GFM2Q969S9 779 aaKnown RBP9.69□□□□□ -0.86
CUL1-202ENST00000409469 SLC6A17Q9H1V8 727 aa9.69□□□□□ -0.86
CUL1-202ENST00000409469 CAPN10Q9HC96 672 aa9.69□□□□□ -0.86
CUL1-202ENST00000409469 PRM3Q9NNZ6 103 aa9.69□□□□□ -0.86
CUL1-202ENST00000409469 ZFC3H1O60293 1989 aaKnown RBP9.69□□□□□ -0.86
CUL1-202ENST00000409469 ARHGEF33A8MVX0 844 aa9.69□□□□□ -0.86
CUL1-202ENST00000409469 TRIM38O00635 465 aa9.69□□□□□ -0.86
CUL1-202ENST00000409469 SCAMP1O15126 338 aa9.69□□□□□ -0.86
CUL1-202ENST00000409469 SLC22A3O75751 556 aa9.69□□□□□ -0.86
CUL1-202ENST00000409469 MTHFD1P11586 935 aaKnown RBP9.69□□□□□ -0.86
CUL1-202ENST00000409469 ADRB3P13945 408 aa9.69□□□□□ -0.86
CUL1-202ENST00000409469 ATP6V1C1P21283 382 aa9.69□□□□□ -0.86
CUL1-202ENST00000409469 ACADVLP49748 655 aa9.69□□□□□ -0.86
CUL1-202ENST00000409469 DDX39BQ13838 428 aaKnown RBP9.69□□□□□ -0.86
CUL1-202ENST00000409469 NFYCQ13952 458 aa9.69□□□□□ -0.86
CUL1-202ENST00000409469 TCEA2Q15560 299 aa9.69□□□□□ -0.86
CUL1-202ENST00000409469 C2orf73Q8N5S3 287 aaPredicted RBP9.69□□□□□ -0.86
CUL1-202ENST00000409469 TRAM1L1Q8N609 369 aa9.69□□□□□ -0.86
CUL1-202ENST00000409469 ZNF184Q99676 751 aaPredicted RBP9.69□□□□□ -0.86
CUL1-202ENST00000409469 NUSAP1Q9BXS6 441 aaKnown RBP9.69□□□□□ -0.86
CUL1-202ENST00000409469 SLC28A3Q9HAS3 691 aa9.69□□□□□ -0.86
CUL1-202ENST00000409469 PARVBQ9HBI1 364 aa9.69□□□□□ -0.86
CUL1-202ENST00000409469 CMTM6Q9NX76 183 aa9.69□□□□□ -0.86
CUL1-202ENST00000409469 SERGEFQ9UGK8 458 aa9.69□□□□□ -0.86
CUL1-202ENST00000409469 SLC27A6Q9Y2P4 619 aa9.69□□□□□ -0.86
CUL1-202ENST00000409469 SNX5Q9Y5X3 404 aa9.69□□□□□ -0.86
CUL1-202ENST00000409469 COL4A3Q01955 1670 aa9.69□□□□□ -0.86
CUL1-202ENST00000409469 CCDC154A6NI56 674 aa9.69□□□□□ -0.86
CUL1-202ENST00000409469 PDYNP01213 254 aa9.69□□□□□ -0.86
CUL1-202ENST00000409469 SRPRAP08240 638 aaKnown RBP9.69□□□□□ -0.86
CUL1-202ENST00000409469 ATP6V1B2P21281 511 aa9.69□□□□□ -0.86
CUL1-202ENST00000409469 POLR2JP52435 117 aaKnown RBP9.69□□□□□ -0.86
CUL1-202ENST00000409469 CLNS1AP54105 237 aaKnown RBP9.69□□□□□ -0.86
CUL1-202ENST00000409469 KCNK10P57789 538 aa9.69□□□□□ -0.86
CUL1-202ENST00000409469 HYAL1Q12794 435 aa9.69□□□□□ -0.86
CUL1-202ENST00000409469 COX10Q12887 443 aa9.69□□□□□ -0.86
CUL1-202ENST00000409469 ANO7Q6IWH7 933 aa9.69□□□□□ -0.86
CUL1-202ENST00000409469 CYP20A1Q6UW02 462 aa9.69□□□□□ -0.86
CUL1-202ENST00000409469 SUSD1Q6UWL2 747 aa9.69□□□□□ -0.86
CUL1-202ENST00000409469 SLC15A3Q8IY34 581 aa9.69□□□□□ -0.86
CUL1-202ENST00000409469 DDHD1Q8NEL9 900 aa9.69□□□□□ -0.86
CUL1-202ENST00000409469 PPM1MQ96MI6 270 aa9.69□□□□□ -0.86
CUL1-202ENST00000409469 PKP2Q99959 881 aa9.69□□□□□ -0.86
CUL1-202ENST00000409469 ZSCAN5AQ9BUG6 496 aa9.69□□□□□ -0.86
CUL1-202ENST00000409469 DPP7Q9UHL4 492 aa9.69□□□□□ -0.86
CUL1-202ENST00000409469 CCL27Q9Y4X3 112 aa9.69□□□□□ -0.86
CUL1-202ENST00000409469 NUP210Q8TEM1 1887 aaPredicted RBP9.68□□□□□ -0.86
CUL1-202ENST00000409469 TSPAN11A1L157 253 aa9.68□□□□□ -0.86
CUL1-202ENST00000409469 ZNF839A8K0R7 811 aa9.68□□□□□ -0.86
CUL1-202ENST00000409469 CFAP99D6REC4 459 aa9.68□□□□□ -0.86
CUL1-202ENST00000409469 LZTS3O60299 673 aaPredicted RBP9.68□□□□□ -0.86
CUL1-202ENST00000409469 TPST1O60507 370 aa9.68□□□□□ -0.86
CUL1-202ENST00000409469 ULK1O75385 1050 aa9.68□□□□□ -0.86
CUL1-202ENST00000409469 SEC22BO75396 215 aa9.68□□□□□ -0.86
CUL1-202ENST00000409469 BCAS2O75934 225 aaPredicted RBP9.68□□□□□ -0.86
CUL1-202ENST00000409469 LRATO95237 230 aa9.68□□□□□ -0.86
CUL1-202ENST00000409469 MT-ND1P03886 318 aa9.68□□□□□ -0.86
CUL1-202ENST00000409469 HIST1H2AGP0C0S8 130 aaPredicted RBP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms