RNA–Protein interactions for RNA: ENST00000409368.5

SUMO1-206, Transcript of small ubiquitin-like modifier 1, human

TSL 4 BASIC

Gene SUMO1, Length 1,187 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUMO1-206	ENST00000409368	PKM	P14618	531 aa	Known RBP	12.5	□□□□□ -0.41
SUMO1-206	ENST00000409368	UGT2B7	P16662	529 aa		12.5	□□□□□ -0.41
SUMO1-206	ENST00000409368	ITGB6	P18564	788 aa		12.5	□□□□□ -0.41
SUMO1-206	ENST00000409368	PEBP1	P30086	187 aa	Known RBP	12.5	□□□□□ -0.41
SUMO1-206	ENST00000409368	CCNF	P41002	786 aa		12.5	□□□□□ -0.41
SUMO1-206	ENST00000409368	ARL4D	P49703	201 aa		12.5	□□□□□ -0.41
SUMO1-206	ENST00000409368	EIF3B	P55884	814 aa	Known RBP	12.5	□□□□□ -0.41
SUMO1-206	ENST00000409368	MC1R	Q01726	317 aa		12.5	□□□□□ -0.41
SUMO1-206	ENST00000409368	MORF4L2	Q15014	288 aa		12.5	□□□□□ -0.41
SUMO1-206	ENST00000409368	BRD3	Q15059	726 aa		12.5	□□□□□ -0.41
SUMO1-206	ENST00000409368	PPP1R7	Q15435	360 aa		12.5	□□□□□ -0.41
SUMO1-206	ENST00000409368	LONRF1	Q17RB8	773 aa		12.5	□□□□□ -0.41
SUMO1-206	ENST00000409368	NEK10	Q6ZWH5	1172 aa		12.5	□□□□□ -0.41
SUMO1-206	ENST00000409368	OTOA	Q7RTW8	1153 aa		12.5	□□□□□ -0.41
SUMO1-206	ENST00000409368	GALNT7	Q86SF2	657 aa		12.5	□□□□□ -0.41
SUMO1-206	ENST00000409368	CNTN4	Q8IWV2	1026 aa		12.5	□□□□□ -0.41
SUMO1-206	ENST00000409368	LINC01555	Q8NAE3	123 aa		12.5	□□□□□ -0.41
SUMO1-206	ENST00000409368	GALNT6	Q8NCL4	622 aa		12.5	□□□□□ -0.41
SUMO1-206	ENST00000409368	OR2L8	Q8NGY9	312 aa		12.5	□□□□□ -0.41
SUMO1-206	ENST00000409368	CALML6	Q8TD86	181 aa		12.5	□□□□□ -0.41
SUMO1-206	ENST00000409368	KCNJ9	Q92806	393 aa		12.5	□□□□□ -0.41
SUMO1-206	ENST00000409368	ZNF669	Q96BR6	464 aa	Predicted RBP	12.5	□□□□□ -0.41
SUMO1-206	ENST00000409368	MED8	Q96G25	268 aa		12.5	□□□□□ -0.41
SUMO1-206	ENST00000409368	TCTN2	Q96GX1	697 aa		12.5	□□□□□ -0.41
SUMO1-206	ENST00000409368	RAB11FIP5	Q9BXF6	653 aa		12.5	□□□□□ -0.41
SUMO1-206	ENST00000409368	XKR8	Q9H6D3	395 aa		12.5	□□□□□ -0.41
SUMO1-206	ENST00000409368	LHX9	Q9NQ69	397 aa		12.5	□□□□□ -0.41
SUMO1-206	ENST00000409368	SPHK1	Q9NYA1	384 aa		12.5	□□□□□ -0.41
SUMO1-206	ENST00000409368	IL17B	Q9UHF5	180 aa		12.5	□□□□□ -0.41
SUMO1-206	ENST00000409368	PADI1	Q9ULC6	663 aa		12.5	□□□□□ -0.41
SUMO1-206	ENST00000409368	COMMD10	Q9Y6G5	202 aa		12.5	□□□□□ -0.41
SUMO1-206	ENST00000409368	ANKRD12	Q6UB98	2062 aa		12.5	□□□□□ -0.41
SUMO1-206	ENST00000409368	HEATR5B	Q9P2D3	2071 aa		12.5	□□□□□ -0.41
SUMO1-206	ENST00000409368		A0A0J9YY10	115 aa		12.49	□□□□□ -0.41
SUMO1-206	ENST00000409368	GSAP	A4D1B5	854 aa		12.49	□□□□□ -0.41
SUMO1-206	ENST00000409368	GOLGA8K	D6RF30	607 aa		12.49	□□□□□ -0.41
SUMO1-206	ENST00000409368	GOLGA8T	H3BQL2	631 aa		12.49	□□□□□ -0.41
SUMO1-206	ENST00000409368	GOLGA8M	H3BSY2	632 aa		12.49	□□□□□ -0.41
SUMO1-206	ENST00000409368	RASGRF2	O14827	1237 aa		12.49	□□□□□ -0.41
SUMO1-206	ENST00000409368	CPNE3	O75131	537 aa	Known RBP	12.49	□□□□□ -0.41
SUMO1-206	ENST00000409368	C1orf105	O95561	183 aa		12.49	□□□□□ -0.41
SUMO1-206	ENST00000409368	ERG	P11308	486 aa		12.49	□□□□□ -0.41
SUMO1-206	ENST00000409368	PGAM1	P18669	254 aa		12.49	□□□□□ -0.41
SUMO1-206	ENST00000409368	CD9	P21926	228 aa		12.49	□□□□□ -0.41
SUMO1-206	ENST00000409368	F8A1	P23610	371 aa		12.49	□□□□□ -0.41
SUMO1-206	ENST00000409368	RORA	P35398	523 aa		12.49	□□□□□ -0.41
SUMO1-206	ENST00000409368	CLCN7	P51798	805 aa		12.49	□□□□□ -0.41
SUMO1-206	ENST00000409368	FOXK1	P85037	733 aa		12.49	□□□□□ -0.41
SUMO1-206	ENST00000409368	FRG1	Q14331	258 aa	Known RBP	12.49	□□□□□ -0.41
SUMO1-206	ENST00000409368	GPR19	Q15760	415 aa		12.49	□□□□□ -0.41
SUMO1-206	ENST00000409368	TBR1	Q16650	682 aa		12.49	□□□□□ -0.41
SUMO1-206	ENST00000409368	ZNF470	Q6ECI4	717 aa		12.49	□□□□□ -0.41
SUMO1-206	ENST00000409368	HIBCH	Q6NVY1	386 aa	Predicted RBP	12.49	□□□□□ -0.41
SUMO1-206	ENST00000409368	CASC4	Q6P4E1	433 aa		12.49	□□□□□ -0.41
SUMO1-206	ENST00000409368	FBXO38	Q6PIJ6	1188 aa		12.49	□□□□□ -0.41
SUMO1-206	ENST00000409368	CDHR3	Q6ZTQ4	885 aa		12.49	□□□□□ -0.41
SUMO1-206	ENST00000409368	C19orf47	Q8N9M1	422 aa	Known RBP	12.49	□□□□□ -0.41
SUMO1-206	ENST00000409368	FBXO15	Q8NCQ5	510 aa	Predicted RBP	12.49	□□□□□ -0.41
SUMO1-206	ENST00000409368	RAD51AP1	Q96B01	352 aa		12.49	□□□□□ -0.41
SUMO1-206	ENST00000409368	SLC22A18	Q96BI1	424 aa		12.49	□□□□□ -0.41
SUMO1-206	ENST00000409368	LRRC39	Q96DD0	335 aa		12.49	□□□□□ -0.41
SUMO1-206	ENST00000409368	STAMBPL1	Q96FJ0	436 aa		12.49	□□□□□ -0.41
SUMO1-206	ENST00000409368	EBNA1BP2	Q99848	306 aa	Known RBP	12.49	□□□□□ -0.41
SUMO1-206	ENST00000409368	GPR87	Q9BY21	358 aa		12.49	□□□□□ -0.41
SUMO1-206	ENST00000409368	PLAC1	Q9HBJ0	212 aa		12.49	□□□□□ -0.41
SUMO1-206	ENST00000409368	ASIC3	Q9UHC3	531 aa		12.49	□□□□□ -0.41
SUMO1-206	ENST00000409368	TUBD1	Q9UJT1	453 aa		12.49	□□□□□ -0.41
SUMO1-206	ENST00000409368	KCND3	Q9UK17	655 aa		12.49	□□□□□ -0.41
SUMO1-206	ENST00000409368	EIF3F	O00303	357 aa	Predicted RBP	12.48	□□□□□ -0.41
SUMO1-206	ENST00000409368	NIPSNAP2	O75323	286 aa		12.48	□□□□□ -0.41
SUMO1-206	ENST00000409368	PSIP1	O75475	530 aa	Known RBP	12.48	□□□□□ -0.41
SUMO1-206	ENST00000409368	FMO4	P31512	558 aa		12.48	□□□□□ -0.41
SUMO1-206	ENST00000409368	SLC1A2	P43004	574 aa		12.48	□□□□□ -0.41
SUMO1-206	ENST00000409368	GCGR	P47871	477 aa		12.48	□□□□□ -0.41
SUMO1-206	ENST00000409368	THOC5	Q13769	683 aa	Known RBP	12.48	□□□□□ -0.41
SUMO1-206	ENST00000409368	CRYM	Q14894	314 aa		12.48	□□□□□ -0.41
SUMO1-206	ENST00000409368	ZIC1	Q15915	447 aa		12.48	□□□□□ -0.41
SUMO1-206	ENST00000409368	CYP2A13	Q16696	494 aa		12.48	□□□□□ -0.41
SUMO1-206	ENST00000409368	MSS51	Q4VC12	460 aa		12.48	□□□□□ -0.41
SUMO1-206	ENST00000409368	TAF1B	Q53T94	588 aa	Predicted RBP	12.48	□□□□□ -0.41
SUMO1-206	ENST00000409368	IZUMO3	Q5VZ72	239 aa		12.48	□□□□□ -0.41
SUMO1-206	ENST00000409368	ZNF385C	Q66K41	422 aa	Predicted RBP	12.48	□□□□□ -0.41
SUMO1-206	ENST00000409368	ZNF549	Q6P9A3	640 aa		12.48	□□□□□ -0.41
SUMO1-206	ENST00000409368	KIAA0408	Q6ZU52	694 aa		12.48	□□□□□ -0.41
SUMO1-206	ENST00000409368	DENND6A	Q8IWF6	608 aa		12.48	□□□□□ -0.41
SUMO1-206	ENST00000409368	ZNF843	Q8N446	348 aa		12.48	□□□□□ -0.41
SUMO1-206	ENST00000409368	DNAJC22	Q8N4W6	341 aa		12.48	□□□□□ -0.41
SUMO1-206	ENST00000409368	ZBTB2	Q8N680	514 aa		12.48	□□□□□ -0.41
SUMO1-206	ENST00000409368	EXD3	Q8N9H8	876 aa		12.48	□□□□□ -0.41
SUMO1-206	ENST00000409368	SLC38A9	Q8NBW4	561 aa		12.48	□□□□□ -0.41
SUMO1-206	ENST00000409368	SERBP1	Q8NC51	408 aa	Known RBP eCLIP	12.48	□□□□□ -0.41
SUMO1-206	ENST00000409368	OR1L3	Q8NH93	324 aa		12.48	□□□□□ -0.41
SUMO1-206	ENST00000409368	STARD8	Q92502	1023 aa		12.48	□□□□□ -0.41
SUMO1-206	ENST00000409368	DPH2	Q9BQC3	489 aa	Predicted RBP	12.48	□□□□□ -0.41
SUMO1-206	ENST00000409368	FAM167B	Q9BTA0	163 aa		12.48	□□□□□ -0.41
SUMO1-206	ENST00000409368	ADNP	Q9H2P0	1102 aa		12.48	□□□□□ -0.41
SUMO1-206	ENST00000409368	FANCE	Q9HB96	536 aa		12.48	□□□□□ -0.41
SUMO1-206	ENST00000409368	SOHLH2	Q9NX45	425 aa		12.48	□□□□□ -0.41
SUMO1-206	ENST00000409368	SPATA7	Q9P0W8	599 aa		12.48	□□□□□ -0.41
SUMO1-206	ENST00000409368	LNPEP	Q9UIQ6	1025 aa		12.48	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms