RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 HCSTQ9UBK5 93 aa10.42□□□□□ -0.74
NIF3L1-204ENST00000409357 TJP2Q9UDY2 1190 aa10.42□□□□□ -0.74
NIF3L1-204ENST00000409357 ST3GAL5Q9UNP4 418 aa10.42□□□□□ -0.74
NIF3L1-204ENST00000409357 ORC6Q9Y5N6 252 aa10.42□□□□□ -0.74
NIF3L1-204ENST00000409357 USP3Q9Y6I4 520 aa10.42□□□□□ -0.74
NIF3L1-204ENST00000409357 TCF20Q9UGU0 1960 aaKnown RBP10.42□□□□□ -0.74
NIF3L1-204ENST00000409357 PLXNA4Q9HCM2 1894 aa10.41□□□□□ -0.74
NIF3L1-204ENST00000409357 IGKV6-21A0A0C4DH24 114 aa10.41□□□□□ -0.74
NIF3L1-204ENST00000409357 PTGES3LE9PB15 166 aa10.41□□□□□ -0.74
NIF3L1-204ENST00000409357 ARNTLO00327 626 aa10.41□□□□□ -0.74
NIF3L1-204ENST00000409357 NR5A2O00482 541 aa10.41□□□□□ -0.74
NIF3L1-204ENST00000409357 KCNJ13O60928 360 aa10.41□□□□□ -0.74
NIF3L1-204ENST00000409357 TSPAN12O95859 305 aa10.41□□□□□ -0.74
NIF3L1-204ENST00000409357 PRLP01236 227 aa10.41□□□□□ -0.74
NIF3L1-204ENST00000409357 ITGB3P05106 788 aa10.41□□□□□ -0.74
NIF3L1-204ENST00000409357 RPLP2P05387 115 aaKnown RBP10.41□□□□□ -0.74
NIF3L1-204ENST00000409357 RPLP0P05388 317 aaKnown RBP10.41□□□□□ -0.74
NIF3L1-204ENST00000409357 PRR35P0CG20 571 aa10.41□□□□□ -0.74
NIF3L1-204ENST00000409357 MTHFD1P11586 935 aaKnown RBP10.41□□□□□ -0.74
NIF3L1-204ENST00000409357 CPN2P22792 545 aa10.41□□□□□ -0.74
NIF3L1-204ENST00000409357 PSMB9P28065 219 aa10.41□□□□□ -0.74
NIF3L1-204ENST00000409357 SOX6P35712 828 aa10.41□□□□□ -0.74
NIF3L1-204ENST00000409357 PIGAP37287 484 aa10.41□□□□□ -0.74
NIF3L1-204ENST00000409357 RFX2P48378 723 aa10.41□□□□□ -0.74
NIF3L1-204ENST00000409357 CRYBB1P53674 252 aaPredicted RBP10.41□□□□□ -0.74
NIF3L1-204ENST00000409357 MAPK12P53778 367 aa10.41□□□□□ -0.74
NIF3L1-204ENST00000409357 POU5F1BQ06416 359 aa10.41□□□□□ -0.74
NIF3L1-204ENST00000409357 PIGFQ07326 219 aa10.41□□□□□ -0.74
NIF3L1-204ENST00000409357 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.41□□□□□ -0.74
NIF3L1-204ENST00000409357 NFYCQ13952 458 aa10.41□□□□□ -0.74
NIF3L1-204ENST00000409357 KCNC3Q14003 757 aa10.41□□□□□ -0.74
NIF3L1-204ENST00000409357 PPP1R3AQ16821 1122 aa10.41□□□□□ -0.74
NIF3L1-204ENST00000409357 NCBP2-AS2Q69YL0 99 aa10.41□□□□□ -0.74
NIF3L1-204ENST00000409357 TIGD7Q6NT04 549 aaPredicted RBP10.41□□□□□ -0.74
NIF3L1-204ENST00000409357 SLC46A3Q7Z3Q1 461 aa10.41□□□□□ -0.74
NIF3L1-204ENST00000409357 NRARPQ7Z6K4 114 aa10.41□□□□□ -0.74
NIF3L1-204ENST00000409357 B3GNT8Q7Z7M8 397 aa10.41□□□□□ -0.74
NIF3L1-204ENST00000409357 KIF18BQ86Y91 864 aa10.41□□□□□ -0.74
NIF3L1-204ENST00000409357 GPALPP1Q8IXQ4 340 aa10.41□□□□□ -0.74
NIF3L1-204ENST00000409357 SYTL1Q8IYJ3 562 aa10.41□□□□□ -0.74
NIF3L1-204ENST00000409357 SLC22A15Q8IZD6 547 aa10.41□□□□□ -0.74
NIF3L1-204ENST00000409357 EID3Q8N140 333 aa10.41□□□□□ -0.74
NIF3L1-204ENST00000409357 VWA5B2Q8N398 1253 aa10.41□□□□□ -0.74
NIF3L1-204ENST00000409357 ZNF689Q96CS4 500 aaPredicted RBP10.41□□□□□ -0.74
NIF3L1-204ENST00000409357 TNIP3Q96KP6 325 aa10.41□□□□□ -0.74
NIF3L1-204ENST00000409357 SLC30A2Q9BRI3 323 aa10.41□□□□□ -0.74
NIF3L1-204ENST00000409357 C11orf84Q9BUA3 381 aaPredicted RBP10.41□□□□□ -0.74
NIF3L1-204ENST00000409357 MSTO1Q9BUK6 570 aa10.41□□□□□ -0.74
NIF3L1-204ENST00000409357 TTLL2Q9BWV7 592 aa10.41□□□□□ -0.74
NIF3L1-204ENST00000409357 HAPLN2Q9GZV7 340 aa10.41□□□□□ -0.74
NIF3L1-204ENST00000409357 SLC22A4Q9H015 551 aa10.41□□□□□ -0.74
NIF3L1-204ENST00000409357 GSTO2Q9H4Y5 243 aa10.41□□□□□ -0.74
NIF3L1-204ENST00000409357 AKTIPQ9H8T0 292 aa10.41□□□□□ -0.74
NIF3L1-204ENST00000409357 RNF6Q9Y252 685 aa10.41□□□□□ -0.74
NIF3L1-204ENST00000409357 A8MT66 165 aa10.41□□□□□ -0.74
NIF3L1-204ENST00000409357 TOR1AO14656 332 aa10.41□□□□□ -0.74
NIF3L1-204ENST00000409357 BCKDKO14874 412 aa10.41□□□□□ -0.74
NIF3L1-204ENST00000409357 SEC22BO75396 215 aa10.41□□□□□ -0.74
NIF3L1-204ENST00000409357 MICAL2O94851 1124 aa10.41□□□□□ -0.74
NIF3L1-204ENST00000409357 WDPCPO95876 746 aa10.41□□□□□ -0.74
NIF3L1-204ENST00000409357 MT-ND2P03891 347 aa10.41□□□□□ -0.74
NIF3L1-204ENST00000409357 PSKH1P11801 424 aa10.41□□□□□ -0.74
NIF3L1-204ENST00000409357 GGT1P19440 569 aa10.41□□□□□ -0.74
NIF3L1-204ENST00000409357 CD72P21854 359 aa10.41□□□□□ -0.74
NIF3L1-204ENST00000409357 KCNC1P48547 511 aa10.41□□□□□ -0.74
NIF3L1-204ENST00000409357 OLR1P78380 273 aa10.41□□□□□ -0.74
NIF3L1-204ENST00000409357 POU6F2P78424 691 aaPredicted RBP10.41□□□□□ -0.74
NIF3L1-204ENST00000409357 TFAMQ00059 246 aaKnown RBP10.41□□□□□ -0.74
NIF3L1-204ENST00000409357 TFF2Q03403 129 aa10.41□□□□□ -0.74
NIF3L1-204ENST00000409357 SMARCB1Q12824 385 aa10.41□□□□□ -0.74
NIF3L1-204ENST00000409357 IFRD2Q12894 506 aaPredicted RBP10.41□□□□□ -0.74
NIF3L1-204ENST00000409357 EFR3AQ14156 821 aa10.41□□□□□ -0.74
NIF3L1-204ENST00000409357 FAM83EQ2M2I3 478 aa10.41□□□□□ -0.74
NIF3L1-204ENST00000409357 VPS26BQ4G0F5 336 aa10.41□□□□□ -0.74
NIF3L1-204ENST00000409357 PAN2Q504Q3 1202 aaKnown RBP10.41□□□□□ -0.74
NIF3L1-204ENST00000409357 FAM182AQ5T1J6 154 aa10.41□□□□□ -0.74
NIF3L1-204ENST00000409357 PXDC1Q5TGL8 231 aa10.41□□□□□ -0.74
NIF3L1-204ENST00000409357 AGAP9Q5VTM2 703 aa10.41□□□□□ -0.74
NIF3L1-204ENST00000409357 TSPYL5Q86VY4 417 aaPredicted RBP10.41□□□□□ -0.74
NIF3L1-204ENST00000409357 MICU2Q8IYU8 434 aa10.41□□□□□ -0.74
NIF3L1-204ENST00000409357 ITFG1Q8TB96 612 aa10.41□□□□□ -0.74
NIF3L1-204ENST00000409357 CSPG4P5Q96PW8 444 aa10.41□□□□□ -0.74
NIF3L1-204ENST00000409357 ADAM2Q99965 735 aa10.41□□□□□ -0.74
NIF3L1-204ENST00000409357 TMEM168Q9H0V1 697 aa10.41□□□□□ -0.74
NIF3L1-204ENST00000409357 PLEKHA5Q9HAU0 1116 aa10.41□□□□□ -0.74
NIF3L1-204ENST00000409357 NGRNQ9NPE2 291 aaKnown RBP10.41□□□□□ -0.74
NIF3L1-204ENST00000409357 CHST12Q9NRB3 414 aa10.41□□□□□ -0.74
NIF3L1-204ENST00000409357 PTTG3PQ9NZH4 202 aa10.41□□□□□ -0.74
NIF3L1-204ENST00000409357 NUDT5Q9UKK9 219 aa10.41□□□□□ -0.74
NIF3L1-204ENST00000409357 CDH9Q9ULB4 789 aa10.41□□□□□ -0.74
NIF3L1-204ENST00000409357 KLF2Q9Y5W3 355 aaPredicted RBP10.41□□□□□ -0.74
NIF3L1-204ENST00000409357 GPR45Q9Y5Y3 372 aa10.41□□□□□ -0.74
NIF3L1-204ENST00000409357 TUBAL3A6NHL2 446 aa10.4□□□□□ -0.74
NIF3L1-204ENST00000409357 FAM170BA6NMN3 283 aa10.4□□□□□ -0.74
NIF3L1-204ENST00000409357 H0YC42 278 aa10.4□□□□□ -0.74
NIF3L1-204ENST00000409357 MAFO75444 373 aaPredicted RBP10.4□□□□□ -0.74
NIF3L1-204ENST00000409357 CD19P15391 556 aa10.4□□□□□ -0.74
NIF3L1-204ENST00000409357 POU3F3P20264 500 aaPredicted RBP10.4□□□□□ -0.74
NIF3L1-204ENST00000409357 CYP3A5P20815 502 aa10.4□□□□□ -0.74
NIF3L1-204ENST00000409357 LSM3P62310 102 aaKnown RBP10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms