RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 PMS2P54278 862 aa18.62■□□□□ 0.57
SMARCB1-204ENST00000407422 KCNC4Q03721 635 aa18.62■□□□□ 0.57
SMARCB1-204ENST00000407422 TLE1Q04724 770 aa18.62■□□□□ 0.57
SMARCB1-204ENST00000407422 TPSAB1Q15661 275 aa18.62■□□□□ 0.57
SMARCB1-204ENST00000407422 LACTB2Q53H82 288 aaPredicted RBP18.62■□□□□ 0.57
SMARCB1-204ENST00000407422 PTRHD1Q6GMV3 140 aaKnown RBP18.62■□□□□ 0.57
SMARCB1-204ENST00000407422 SYTL1Q8IYJ3 562 aa18.62■□□□□ 0.57
SMARCB1-204ENST00000407422 C2orf73Q8N5S3 287 aaPredicted RBP18.62■□□□□ 0.57
SMARCB1-204ENST00000407422 ENDOVQ8N8Q3 282 aaKnown RBP18.62■□□□□ 0.57
SMARCB1-204ENST00000407422 LINC01555Q8NAE3 123 aa18.62■□□□□ 0.57
SMARCB1-204ENST00000407422 TCTN2Q96GX1 697 aa18.62■□□□□ 0.57
SMARCB1-204ENST00000407422 MENTQ9BUN1 341 aa18.62■□□□□ 0.57
SMARCB1-204ENST00000407422 TRIM55Q9BYV6 548 aa18.62■□□□□ 0.57
SMARCB1-204ENST00000407422 CLMPQ9H6B4 373 aa18.62■□□□□ 0.57
SMARCB1-204ENST00000407422 TLK1Q9UKI8 766 aa18.62■□□□□ 0.57
SMARCB1-204ENST00000407422 PRRC2CQ9Y520 2896 aaKnown RBP18.62■□□□□ 0.57
SMARCB1-204ENST00000407422 A0A0J9YY10 115 aa18.61■□□□□ 0.57
SMARCB1-204ENST00000407422 ISM1B1AKI9 464 aa18.61■□□□□ 0.57
SMARCB1-204ENST00000407422 E7EQ34 232 aa18.61■□□□□ 0.57
SMARCB1-204ENST00000407422 AP3B1O00203 1094 aa18.61■□□□□ 0.57
SMARCB1-204ENST00000407422 SLCO2B1O94956 709 aa18.61■□□□□ 0.57
SMARCB1-204ENST00000407422 CAPN1P07384 714 aa18.61■□□□□ 0.57
SMARCB1-204ENST00000407422 PKLRP30613 574 aa18.61■□□□□ 0.57
SMARCB1-204ENST00000407422 GABRA4P48169 554 aa18.61■□□□□ 0.57
SMARCB1-204ENST00000407422 CSRP3P50461 194 aa18.61■□□□□ 0.57
SMARCB1-204ENST00000407422 CDK16Q00536 496 aa18.61■□□□□ 0.57
SMARCB1-204ENST00000407422 GPS1Q13098 491 aa18.61■□□□□ 0.57
SMARCB1-204ENST00000407422 GRB7Q14451 532 aa18.61■□□□□ 0.57
SMARCB1-204ENST00000407422 KCNJ11Q14654 390 aa18.61■□□□□ 0.57
SMARCB1-204ENST00000407422 ANKRD22Q5VYY1 191 aa18.61■□□□□ 0.57
SMARCB1-204ENST00000407422 FAM198BQ6UWH4 519 aa18.61■□□□□ 0.57
SMARCB1-204ENST00000407422 MPP5Q8N3R9 675 aa18.61■□□□□ 0.57
SMARCB1-204ENST00000407422 IL17FQ96PD4 163 aa18.61■□□□□ 0.57
SMARCB1-204ENST00000407422 SPRTNQ9H040 489 aaPredicted RBP18.61■□□□□ 0.57
SMARCB1-204ENST00000407422 EPN3Q9H201 632 aa18.61■□□□□ 0.57
SMARCB1-204ENST00000407422 H3BMH7 237 aa18.6■□□□□ 0.57
SMARCB1-204ENST00000407422 NDUFS3O75489 264 aa18.6■□□□□ 0.57
SMARCB1-204ENST00000407422 RFPL1O75677 317 aa18.6■□□□□ 0.57
SMARCB1-204ENST00000407422 RAB28P51157 221 aa18.6■□□□□ 0.57
SMARCB1-204ENST00000407422 KYNUQ16719 465 aa18.6■□□□□ 0.57
SMARCB1-204ENST00000407422 CPZQ66K79 652 aa18.6■□□□□ 0.57
SMARCB1-204ENST00000407422 APLFQ8IW19 511 aaPredicted RBP18.6■□□□□ 0.57
SMARCB1-204ENST00000407422 OTUD6BQ8N6M0 293 aa18.6■□□□□ 0.57
SMARCB1-204ENST00000407422 SEC14L1Q92503 715 aa18.6■□□□□ 0.57
SMARCB1-204ENST00000407422 TRIM56Q9BRZ2 755 aaKnown RBP18.6■□□□□ 0.57
SMARCB1-204ENST00000407422 NLNQ9BYT8 704 aa18.6■□□□□ 0.57
SMARCB1-204ENST00000407422 SLC7A5P2Q9GIP4 190 aa18.6■□□□□ 0.57
SMARCB1-204ENST00000407422 MRM3Q9HC36 420 aaKnown RBP18.6■□□□□ 0.57
SMARCB1-204ENST00000407422 GNPTGQ9UJJ9 305 aa18.6■□□□□ 0.57
SMARCB1-204ENST00000407422 SOX13Q9UN79 622 aa18.6■□□□□ 0.57
SMARCB1-204ENST00000407422 KLHL20Q9Y2M5 609 aa18.6■□□□□ 0.57
SMARCB1-204ENST00000407422 MKRN2OSH3BPM6 223 aa18.6■□□□□ 0.57
SMARCB1-204ENST00000407422 NRDCO43847 1150 aa18.6■□□□□ 0.57
SMARCB1-204ENST00000407422 OR2B3O76000 313 aa18.6■□□□□ 0.57
SMARCB1-204ENST00000407422 RAB40ALP0C0E4 278 aa18.6■□□□□ 0.57
SMARCB1-204ENST00000407422 EIF3BP55884 814 aaKnown RBP18.6■□□□□ 0.57
SMARCB1-204ENST00000407422 CHAF1BQ13112 559 aa18.6■□□□□ 0.57
SMARCB1-204ENST00000407422 KIR2DS3Q14952 304 aa18.6■□□□□ 0.57
SMARCB1-204ENST00000407422 SLC5A12Q1EHB4 618 aa18.6■□□□□ 0.57
SMARCB1-204ENST00000407422 CTSL3PQ5NE16 218 aa18.6■□□□□ 0.57
SMARCB1-204ENST00000407422 ZNF385CQ66K41 422 aaPredicted RBP18.6■□□□□ 0.57
SMARCB1-204ENST00000407422 UNC5DQ6UXZ4 953 aa18.6■□□□□ 0.57
SMARCB1-204ENST00000407422 TAX1BP1Q86VP1 789 aa18.6■□□□□ 0.57
SMARCB1-204ENST00000407422 DCUN1D3Q8IWE4 304 aa18.6■□□□□ 0.57
SMARCB1-204ENST00000407422 RASGEF1CQ8N431 466 aa18.6■□□□□ 0.57
SMARCB1-204ENST00000407422 THAP4Q8WY91 577 aa18.6■□□□□ 0.57
SMARCB1-204ENST00000407422 N4BP2L2Q92802 583 aaPredicted RBP18.6■□□□□ 0.57
SMARCB1-204ENST00000407422 BIRC8Q96P09 236 aa18.6■□□□□ 0.57
SMARCB1-204ENST00000407422 CHRNA10Q9GZZ6 450 aa18.6■□□□□ 0.57
SMARCB1-204ENST00000407422 TCFL5Q9UL49 500 aa18.6■□□□□ 0.57
SMARCB1-204ENST00000407422 SNX7Q9UNH6 387 aa18.6■□□□□ 0.57
SMARCB1-204ENST00000407422 RUVBL2Q9Y230 463 aaKnown RBP18.6■□□□□ 0.57
SMARCB1-204ENST00000407422 JRKLQ9Y4A0 524 aa18.6■□□□□ 0.57
SMARCB1-204ENST00000407422 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.59■□□□□ 0.57
SMARCB1-204ENST00000407422 KDM1AO60341 852 aa18.59■□□□□ 0.57
SMARCB1-204ENST00000407422 KRT14P02533 472 aa18.59■□□□□ 0.57
SMARCB1-204ENST00000407422 PDGFAP04085 211 aa18.59■□□□□ 0.57
SMARCB1-204ENST00000407422 CD9P21926 228 aa18.59■□□□□ 0.57
SMARCB1-204ENST00000407422 RPS3P23396 243 aaKnown RBP eCLIP18.59■□□□□ 0.57
SMARCB1-204ENST00000407422 MAGEA6P43360 314 aa18.59■□□□□ 0.57
SMARCB1-204ENST00000407422 TMED2Q15363 201 aa18.59■□□□□ 0.57
SMARCB1-204ENST00000407422 CAND1Q86VP6 1230 aaKnown RBP18.59■□□□□ 0.57
SMARCB1-204ENST00000407422 GPR135Q8IZ08 494 aa18.59■□□□□ 0.57
SMARCB1-204ENST00000407422 DNAJC22Q8N4W6 341 aa18.59■□□□□ 0.57
SMARCB1-204ENST00000407422 ADAMTS17Q8TE56 1095 aa18.59■□□□□ 0.57
SMARCB1-204ENST00000407422 MAGOHBQ96A72 148 aaKnown RBP18.59■□□□□ 0.57
SMARCB1-204ENST00000407422 PANX3Q96QZ0 392 aa18.59■□□□□ 0.57
SMARCB1-204ENST00000407422 ANAPC2Q9UJX6 822 aa18.59■□□□□ 0.57
SMARCB1-204ENST00000407422 NFS1Q9Y697 457 aa18.59■□□□□ 0.57
SMARCB1-204ENST00000407422 HECTD1Q9ULT8 2610 aa18.58■□□□□ 0.57
SMARCB1-204ENST00000407422 ANKRD12Q6UB98 2062 aa18.58■□□□□ 0.57
SMARCB1-204ENST00000407422 KRT87PA6NCN2 255 aa18.58■□□□□ 0.56
SMARCB1-204ENST00000407422 ARGFXA6NJG6 315 aa18.58■□□□□ 0.56
SMARCB1-204ENST00000407422 TMEM63AO94886 807 aa18.58■□□□□ 0.56
SMARCB1-204ENST00000407422 RPN2P04844 631 aa18.58■□□□□ 0.56
SMARCB1-204ENST00000407422 ATXN8OSP0DMR3 200 aa18.58■□□□□ 0.56
SMARCB1-204ENST00000407422 MAGP20916 626 aa18.58■□□□□ 0.56
SMARCB1-204ENST00000407422 FMO4P31512 558 aa18.58■□□□□ 0.56
SMARCB1-204ENST00000407422 CASRP41180 1078 aa18.58■□□□□ 0.56
SMARCB1-204ENST00000407422 PTGIRP43119 386 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms