RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 C15orf38-AP3S2A0A0A6YYH1 394 aa12.63□□□□□ -0.39
SMARCB1-203ENST00000407082 A0A0J9YYE9 177 aa12.63□□□□□ -0.39
SMARCB1-203ENST00000407082 TTC34A8MYJ7 566 aa12.63□□□□□ -0.39
SMARCB1-203ENST00000407082 K7ERQ8 282 aa12.63□□□□□ -0.39
SMARCB1-203ENST00000407082 UBFD1O14562 309 aaKnown RBP12.63□□□□□ -0.39
SMARCB1-203ENST00000407082 PIP5K1BO14986 540 aa12.63□□□□□ -0.39
SMARCB1-203ENST00000407082 SYNCRIPO60506 623 aaKnown RBP12.63□□□□□ -0.39
SMARCB1-203ENST00000407082 ADAM23O75077 832 aa12.63□□□□□ -0.39
SMARCB1-203ENST00000407082 GJB3O75712 270 aa12.63□□□□□ -0.39
SMARCB1-203ENST00000407082 CD160O95971 181 aa12.63□□□□□ -0.39
SMARCB1-203ENST00000407082 TRBC1P01850 177 aa12.63□□□□□ -0.39
SMARCB1-203ENST00000407082 EPHX1P07099 455 aa12.63□□□□□ -0.39
SMARCB1-203ENST00000407082 SRCP12931 536 aa12.63□□□□□ -0.39
SMARCB1-203ENST00000407082 HLA-EP13747 358 aa12.63□□□□□ -0.39
SMARCB1-203ENST00000407082 MSH3P20585 1137 aa12.63□□□□□ -0.39
SMARCB1-203ENST00000407082 SPAM1P38567 509 aa12.63□□□□□ -0.39
SMARCB1-203ENST00000407082 VASPP50552 380 aaPredicted RBP12.63□□□□□ -0.39
SMARCB1-203ENST00000407082 CDH13P55290 713 aa12.63□□□□□ -0.39
SMARCB1-203ENST00000407082 KCNK10P57789 538 aa12.63□□□□□ -0.39
SMARCB1-203ENST00000407082 MAD2L1Q13257 205 aaPredicted RBP12.63□□□□□ -0.39
SMARCB1-203ENST00000407082 PEX6Q13608 980 aa12.63□□□□□ -0.39
SMARCB1-203ENST00000407082 ENPP2Q13822 863 aa12.63□□□□□ -0.39
SMARCB1-203ENST00000407082 CEACAM7Q14002 265 aa12.63□□□□□ -0.39
SMARCB1-203ENST00000407082 PCBP2Q15366 365 aaKnown RBP eCLIP12.63□□□□□ -0.398e-7■■■■■ 29.4
SMARCB1-203ENST00000407082 GRAMD1BQ3KR37 738 aa12.63□□□□□ -0.39
SMARCB1-203ENST00000407082 CDKL4Q5MAI5 379 aa12.63□□□□□ -0.39
SMARCB1-203ENST00000407082 CLEC6AQ6EIG7 209 aa12.63□□□□□ -0.39
SMARCB1-203ENST00000407082 ARPINQ7Z6K5 226 aa12.63□□□□□ -0.39
SMARCB1-203ENST00000407082 SLCO6A1Q86UG4 719 aa12.63□□□□□ -0.39
SMARCB1-203ENST00000407082 SPATA24Q86W54 205 aa12.63□□□□□ -0.39
SMARCB1-203ENST00000407082 ST13P4Q8IZP2 240 aaPredicted RBP12.63□□□□□ -0.39
SMARCB1-203ENST00000407082 ZNF366Q8N895 744 aa12.63□□□□□ -0.39
SMARCB1-203ENST00000407082 HIPK4Q8NE63 616 aa12.63□□□□□ -0.39
SMARCB1-203ENST00000407082 BHLHE22Q8NFJ8 381 aaPredicted RBP12.63□□□□□ -0.39
SMARCB1-203ENST00000407082 CD200R1Q8TD46 325 aa12.63□□□□□ -0.39
SMARCB1-203ENST00000407082 PIH1D2Q8WWB5 315 aa12.63□□□□□ -0.39
SMARCB1-203ENST00000407082 MARK4Q96L34 752 aa12.63□□□□□ -0.39
SMARCB1-203ENST00000407082 DCBLD2Q96PD2 775 aa12.63□□□□□ -0.39
SMARCB1-203ENST00000407082 GABRG3Q99928 467 aa12.63□□□□□ -0.39
SMARCB1-203ENST00000407082 CEP44Q9C0F1 390 aa12.63□□□□□ -0.39
SMARCB1-203ENST00000407082 C8orf4Q9NR00 106 aa12.63□□□□□ -0.39
SMARCB1-203ENST00000407082 LATS2Q9NRM7 1088 aa12.63□□□□□ -0.39
SMARCB1-203ENST00000407082 RAD18Q9NS91 495 aa12.63□□□□□ -0.39
SMARCB1-203ENST00000407082 DNAAF2Q9NVR5 837 aaKnown RBP12.63□□□□□ -0.39
SMARCB1-203ENST00000407082 ZIM2Q9NZV7 527 aa12.63□□□□□ -0.39
SMARCB1-203ENST00000407082 TMEM181Q9P2C4 612 aa12.63□□□□□ -0.39
SMARCB1-203ENST00000407082 POLG2Q9UHN1 485 aa12.63□□□□□ -0.39
SMARCB1-203ENST00000407082 PCDHGA7Q9Y5G6 932 aa12.63□□□□□ -0.39
SMARCB1-203ENST00000407082 FREM2Q5SZK8 3169 aa12.63□□□□□ -0.39
SMARCB1-203ENST00000407082 MAST4O15021 2626 aa12.62□□□□□ -0.39
SMARCB1-203ENST00000407082 PABPN1LA6NDY0 278 aaKnown RBP12.62□□□□□ -0.39
SMARCB1-203ENST00000407082 NPEPPSL1A6NEC2 478 aa12.62□□□□□ -0.39
SMARCB1-203ENST00000407082 SMAD6O43541 496 aaKnown RBP12.62□□□□□ -0.39
SMARCB1-203ENST00000407082 DNAJA2O60884 412 aa12.62□□□□□ -0.39
SMARCB1-203ENST00000407082 OTCP00480 354 aa12.62□□□□□ -0.39
SMARCB1-203ENST00000407082 C8BP07358 591 aa12.62□□□□□ -0.39
SMARCB1-203ENST00000407082 HGFP14210 728 aa12.62□□□□□ -0.39
SMARCB1-203ENST00000407082 HOXB2P14652 356 aa12.62□□□□□ -0.39
SMARCB1-203ENST00000407082 XRCC1P18887 633 aaPredicted RBP12.62□□□□□ -0.39
SMARCB1-203ENST00000407082 SH3BGRP55822 239 aaPredicted RBP12.62□□□□□ -0.39
SMARCB1-203ENST00000407082 POLR2LP62875 67 aaKnown RBP12.62□□□□□ -0.39
SMARCB1-203ENST00000407082 ERVK-8P63133 956 aa12.62□□□□□ -0.39
SMARCB1-203ENST00000407082 RHDQ02161 417 aa12.62□□□□□ -0.39
SMARCB1-203ENST00000407082 SLC14A1Q13336 389 aa12.62□□□□□ -0.39
SMARCB1-203ENST00000407082 INPP5AQ14642 412 aa12.62□□□□□ -0.39
SMARCB1-203ENST00000407082 HNRNPA1L2Q32P51 320 aaKnown RBP12.62□□□□□ -0.39
SMARCB1-203ENST00000407082 PDCD4Q53EL6 469 aaKnown RBP12.62□□□□□ -0.39
SMARCB1-203ENST00000407082 CCDC157Q569K6 752 aa12.62□□□□□ -0.39
SMARCB1-203ENST00000407082 CTSL3PQ5NE16 218 aa12.62□□□□□ -0.39
SMARCB1-203ENST00000407082 PEAR1Q5VY43 1037 aaPredicted RBP12.62□□□□□ -0.39
SMARCB1-203ENST00000407082 USP45Q70EL2 814 aa12.62□□□□□ -0.39
SMARCB1-203ENST00000407082 DHFR2Q86XF0 187 aa12.62□□□□□ -0.39
SMARCB1-203ENST00000407082 SIDT2Q8NBJ9 832 aaKnown RBP12.62□□□□□ -0.39
SMARCB1-203ENST00000407082 GRIN3AQ8TCU5 1115 aa12.62□□□□□ -0.39
SMARCB1-203ENST00000407082 FRS2Q8WU20 508 aa12.62□□□□□ -0.39
SMARCB1-203ENST00000407082 SLC39A7Q92504 469 aa12.62□□□□□ -0.39
SMARCB1-203ENST00000407082 MAGEB10Q96LZ2 347 aaPredicted RBP12.62□□□□□ -0.39
SMARCB1-203ENST00000407082 HSPA12BQ96MM6 686 aa12.62□□□□□ -0.39
SMARCB1-203ENST00000407082 TRAPPC9Q96Q05 1148 aa12.62□□□□□ -0.39
SMARCB1-203ENST00000407082 LYSMD1Q96S90 227 aa12.62□□□□□ -0.39
SMARCB1-203ENST00000407082 TRIM54Q9BYV2 358 aa12.62□□□□□ -0.39
SMARCB1-203ENST00000407082 MTG2Q9H4K7 406 aa12.62□□□□□ -0.39
SMARCB1-203ENST00000407082 ASB8Q9H765 288 aa12.62□□□□□ -0.39
SMARCB1-203ENST00000407082 BPIFA1Q9NP55 256 aa12.62□□□□□ -0.39
SMARCB1-203ENST00000407082 SEMA4BQ9NPR2 832 aaPredicted RBP12.62□□□□□ -0.39
SMARCB1-203ENST00000407082 SDR39U1Q9NRG7 319 aaPredicted RBP12.62□□□□□ -0.39
SMARCB1-203ENST00000407082 NDUFA13Q9P0J0 144 aa12.62□□□□□ -0.39
SMARCB1-203ENST00000407082 CRLS1Q9UJA2 301 aa12.62□□□□□ -0.39
SMARCB1-203ENST00000407082 PCTPQ9UKL6 214 aa12.62□□□□□ -0.39
SMARCB1-203ENST00000407082 ADAMTS6Q9UKP5 1117 aa12.62□□□□□ -0.39
SMARCB1-203ENST00000407082 AP3M1Q9Y2T2 418 aa12.62□□□□□ -0.39
SMARCB1-203ENST00000407082 FCF1Q9Y324 198 aaKnown RBP12.62□□□□□ -0.39
SMARCB1-203ENST00000407082 LAMA5O15230 3695 aa12.61□□□□□ -0.39
SMARCB1-203ENST00000407082 PLXNB3Q9ULL4 1909 aa12.61□□□□□ -0.39
SMARCB1-203ENST00000407082 TNRC6BQ9UPQ9 1833 aaKnown RBP12.61□□□□□ -0.39
SMARCB1-203ENST00000407082 TRBV5-4A0A0C4DH59 114 aa12.61□□□□□ -0.39
SMARCB1-203ENST00000407082 GLYATL1P3A0A0U1RQE8 302 aa12.61□□□□□ -0.39
SMARCB1-203ENST00000407082 C1orf232A0A0U1RR37 186 aa12.61□□□□□ -0.39
SMARCB1-203ENST00000407082 EDDM13A0A1B0GTR0 161 aa12.61□□□□□ -0.39
SMARCB1-203ENST00000407082 A0A1W2PQF6 199 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms