RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 ENY2Q9NPA8 101 aa11.84□□□□□ -0.51
SMCR8-201ENST00000406438 GTF2IRD1Q9UHL9 959 aa11.84□□□□□ -0.51
SMCR8-201ENST00000406438 ABLIM1O14639 778 aa11.83□□□□□ -0.51
SMCR8-201ENST00000406438 RPLP0P05388 317 aaKnown RBP11.83□□□□□ -0.51
SMCR8-201ENST00000406438 ARL13AQ5H913 290 aaPredicted RBP11.83□□□□□ -0.51
SMCR8-201ENST00000406438 LNX2Q8N448 690 aa11.83□□□□□ -0.51
SMCR8-201ENST00000406438 PIWIL1Q96J94 861 aaKnown RBP11.83□□□□□ -0.51
SMCR8-201ENST00000406438 MARCH7Q9H992 704 aa11.83□□□□□ -0.51
SMCR8-201ENST00000406438 MLXQ9UH92 298 aa11.83□□□□□ -0.51
SMCR8-201ENST00000406438 ZNF180Q9UJW8 692 aa11.83□□□□□ -0.51
SMCR8-201ENST00000406438 RUVBL1Q9Y265 456 aaKnown RBP11.83□□□□□ -0.51
SMCR8-201ENST00000406438 PCDHGB2Q9Y5G2 931 aa11.83□□□□□ -0.51
SMCR8-201ENST00000406438 PEX16Q9Y5Y5 336 aa11.83□□□□□ -0.51
SMCR8-201ENST00000406438 PRORSD1PA6NEY8 169 aa11.83□□□□□ -0.52
SMCR8-201ENST00000406438 EFCAB9A8MZ26 197 aa11.83□□□□□ -0.52
SMCR8-201ENST00000406438 MAP2K7O14733 419 aa11.83□□□□□ -0.52
SMCR8-201ENST00000406438 MT-CYBP00156 380 aaPredicted RBP11.83□□□□□ -0.52
SMCR8-201ENST00000406438 PIM1P11309 404 aaPredicted RBP11.83□□□□□ -0.52
SMCR8-201ENST00000406438 POU2F1P14859 743 aa11.83□□□□□ -0.52
SMCR8-201ENST00000406438 RYKP34925 604 aa11.83□□□□□ -0.52
SMCR8-201ENST00000406438 PLA2G16P53816 162 aa11.83□□□□□ -0.52
SMCR8-201ENST00000406438 CRTC2Q53ET0 693 aaPredicted RBP11.83□□□□□ -0.52
SMCR8-201ENST00000406438 FAM110BQ8TC76 370 aa11.83□□□□□ -0.52
SMCR8-201ENST00000406438 RGMAQ96B86 450 aa11.83□□□□□ -0.52
SMCR8-201ENST00000406438 ZNF514Q96K75 400 aaPredicted RBP11.83□□□□□ -0.52
SMCR8-201ENST00000406438 GOLGA2P5Q9HBQ8 144 aa11.83□□□□□ -0.52
SMCR8-201ENST00000406438 TMEM5Q9Y2B1 443 aa11.83□□□□□ -0.52
SMCR8-201ENST00000406438 DUXAA6NLW8 204 aa11.83□□□□□ -0.52
SMCR8-201ENST00000406438 OR2AT4A6NND4 320 aa11.83□□□□□ -0.52
SMCR8-201ENST00000406438 hCG_2039718K7EN88 272 aa11.83□□□□□ -0.52
SMCR8-201ENST00000406438 RBM34P42696 430 aaKnown RBP11.83□□□□□ -0.52
SMCR8-201ENST00000406438 APLP1P51693 650 aa11.83□□□□□ -0.52
SMCR8-201ENST00000406438 IL10RBQ08334 325 aa11.83□□□□□ -0.52
SMCR8-201ENST00000406438 FOXR2Q6PJQ5 311 aa11.83□□□□□ -0.52
SMCR8-201ENST00000406438 LRRC55Q6ZSA7 311 aa11.83□□□□□ -0.52
SMCR8-201ENST00000406438 CLNKQ7Z7G1 428 aa11.83□□□□□ -0.52
SMCR8-201ENST00000406438 CHERPQ8IWX8 916 aaKnown RBP11.83□□□□□ -0.52
SMCR8-201ENST00000406438 PLD5Q8N7P1 536 aa11.83□□□□□ -0.52
SMCR8-201ENST00000406438 NDC1Q9BTX1 674 aa11.83□□□□□ -0.52
SMCR8-201ENST00000406438 WDR55Q9H6Y2 383 aaPredicted RBP11.83□□□□□ -0.52
SMCR8-201ENST00000406438 MKKSQ9NPJ1 570 aaPredicted RBP11.83□□□□□ -0.52
SMCR8-201ENST00000406438 PCDHGC3Q9UN70 934 aa11.83□□□□□ -0.52
SMCR8-201ENST00000406438 PCDHA2Q9Y5H9 948 aa11.83□□□□□ -0.52
SMCR8-201ENST00000406438 OC90Q02509 493 aaPredicted RBP11.83□□□□□ -0.52
SMCR8-201ENST00000406438 VARS2Q5ST30 1063 aaKnown RBP11.83□□□□□ -0.52
SMCR8-201ENST00000406438 NPAS4Q8IUM7 802 aa11.83□□□□□ -0.52
SMCR8-201ENST00000406438 C15orf40Q8WUR7 153 aa11.83□□□□□ -0.52
SMCR8-201ENST00000406438 EMID1Q96A84 441 aaPredicted RBP11.83□□□□□ -0.52
SMCR8-201ENST00000406438 NUS1Q96E22 293 aa11.83□□□□□ -0.52
SMCR8-201ENST00000406438 CAMK1GQ96NX5 476 aa11.83□□□□□ -0.52
SMCR8-201ENST00000406438 CCDC86Q9H6F5 360 aaKnown RBP11.83□□□□□ -0.52
SMCR8-201ENST00000406438 ANKHQ9HCJ1 492 aa11.83□□□□□ -0.52
SMCR8-201ENST00000406438 PDE10AQ9Y233 779 aa11.83□□□□□ -0.52
SMCR8-201ENST00000406438 DAPL1A0PJW8 107 aa11.83□□□□□ -0.52
SMCR8-201ENST00000406438 FABP12A6NFH5 140 aa11.83□□□□□ -0.52
SMCR8-201ENST00000406438 EDF1O60869 148 aaKnown RBP11.83□□□□□ -0.52
SMCR8-201ENST00000406438 SCELO95171 688 aa11.83□□□□□ -0.52
SMCR8-201ENST00000406438 CPN2P22792 545 aa11.83□□□□□ -0.52
SMCR8-201ENST00000406438 CXCR1P25024 350 aa11.83□□□□□ -0.52
SMCR8-201ENST00000406438 CDKN2BP42772 138 aa11.83□□□□□ -0.52
SMCR8-201ENST00000406438 MAZP56270 477 aaKnown RBP11.83□□□□□ -0.52
SMCR8-201ENST00000406438 GAD2Q05329 585 aa11.83□□□□□ -0.52
SMCR8-201ENST00000406438 IFI44LQ53G44 452 aa11.83□□□□□ -0.52
SMCR8-201ENST00000406438 FSTL4Q6MZW2 842 aa11.83□□□□□ -0.52
SMCR8-201ENST00000406438 FRMD7Q6ZUT3 714 aa11.83□□□□□ -0.52
SMCR8-201ENST00000406438 MON1BQ7L1V2 547 aa11.83□□□□□ -0.52
SMCR8-201ENST00000406438 OXR1Q8N573 874 aa11.83□□□□□ -0.52
SMCR8-201ENST00000406438 PROKR2Q8NFJ6 384 aa11.83□□□□□ -0.52
SMCR8-201ENST00000406438 PNPLA2Q96AD5 504 aa11.83□□□□□ -0.52
SMCR8-201ENST00000406438 HAPLN3Q96S86 360 aa11.83□□□□□ -0.52
SMCR8-201ENST00000406438 RIMKLBQ9ULI2 386 aa11.83□□□□□ -0.52
SMCR8-201ENST00000406438 PCDHGA10Q9Y5H3 936 aa11.83□□□□□ -0.52
SMCR8-201ENST00000406438 UBR2Q8IWV8 1755 aa11.83□□□□□ -0.52
SMCR8-201ENST00000406438 OCLNQ16625 522 aa11.83□□□□□ -0.52
SMCR8-201ENST00000406438 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.83□□□□□ -0.52
SMCR8-201ENST00000406438 PHF19Q5T6S3 580 aa11.83□□□□□ -0.52
SMCR8-201ENST00000406438 ABHD15Q6UXT9 468 aa11.83□□□□□ -0.52
SMCR8-201ENST00000406438 DNAJB8Q8NHS0 232 aa11.83□□□□□ -0.52
SMCR8-201ENST00000406438 LRRC46Q96FV0 321 aa11.83□□□□□ -0.52
SMCR8-201ENST00000406438 POLR3BQ9NW08 1133 aaPredicted RBP11.83□□□□□ -0.52
SMCR8-201ENST00000406438 CDC14AQ9UNH5 594 aa11.83□□□□□ -0.52
SMCR8-201ENST00000406438 SPEF1Q9Y4P9 236 aa11.83□□□□□ -0.52
SMCR8-201ENST00000406438 FAM208AQ9UK61 1670 aaKnown RBP11.83□□□□□ -0.52
SMCR8-201ENST00000406438 PRKCHP24723 683 aa11.83□□□□□ -0.52
SMCR8-201ENST00000406438 ARFRP1Q13795 201 aa11.83□□□□□ -0.52
SMCR8-201ENST00000406438 HSDL2Q6YN16 418 aa11.83□□□□□ -0.52
SMCR8-201ENST00000406438 DENND6BQ8NEG7 585 aa11.83□□□□□ -0.52
SMCR8-201ENST00000406438 CNDP2Q96KP4 475 aaKnown RBP11.83□□□□□ -0.52
SMCR8-201ENST00000406438 IFT52Q9Y366 437 aa11.83□□□□□ -0.52
SMCR8-201ENST00000406438 SAP18O00422 153 aaKnown RBP11.82□□□□□ -0.52
SMCR8-201ENST00000406438 CILPO75339 1184 aa11.82□□□□□ -0.52
SMCR8-201ENST00000406438 CFIP05156 583 aa11.82□□□□□ -0.52
SMCR8-201ENST00000406438 ZNF806P0C7X5 589 aa11.82□□□□□ -0.52
SMCR8-201ENST00000406438 NCK1P16333 377 aa11.82□□□□□ -0.52
SMCR8-201ENST00000406438 IL17AQ16552 155 aa11.82□□□□□ -0.52
SMCR8-201ENST00000406438 PAMR1Q6UXH9 720 aa11.82□□□□□ -0.52
SMCR8-201ENST00000406438 ZNF782Q6ZMW2 699 aaPredicted RBP11.82□□□□□ -0.52
SMCR8-201ENST00000406438 TBATAQ96M53 351 aa11.82□□□□□ -0.52
SMCR8-201ENST00000406438 MTERF1Q99551 399 aaKnown RBP11.82□□□□□ -0.52
SMCR8-201ENST00000406438 ANKRA2Q9H9E1 313 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms