RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 FZD10Q9ULW2 581 aa4.68□□□□□ -1.66
HMGB1P13-201ENST00000406019 YIPF1Q9Y548 306 aa4.68□□□□□ -1.66
HMGB1P13-201ENST00000406019 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.68□□□□□ -1.66
HMGB1P13-201ENST00000406019 SPAG9O60271 1321 aaKnown RBP4.68□□□□□ -1.66
HMGB1P13-201ENST00000406019 HEG1Q9ULI3 1381 aa4.67□□□□□ -1.66
HMGB1P13-201ENST00000406019 DUXAA6NLW8 204 aa4.67□□□□□ -1.66
HMGB1P13-201ENST00000406019 GPR137BO60478 399 aa4.67□□□□□ -1.66
HMGB1P13-201ENST00000406019 SEC22BO75396 215 aa4.67□□□□□ -1.66
HMGB1P13-201ENST00000406019 PGLSO95336 258 aa4.67□□□□□ -1.66
HMGB1P13-201ENST00000406019 PPP1R3DO95685 299 aa4.67□□□□□ -1.66
HMGB1P13-201ENST00000406019 ACAA1P09110 424 aaPredicted RBP4.67□□□□□ -1.66
HMGB1P13-201ENST00000406019 T-ENOLP0DO92 83 aa4.67□□□□□ -1.66
HMGB1P13-201ENST00000406019 ZNF12P17014 697 aa4.67□□□□□ -1.66
HMGB1P13-201ENST00000406019 C21orf33P30042 268 aaPredicted RBP4.67□□□□□ -1.66
HMGB1P13-201ENST00000406019 CDC25AP30304 524 aa4.67□□□□□ -1.66
HMGB1P13-201ENST00000406019 SSTR2P30874 369 aa4.67□□□□□ -1.66
HMGB1P13-201ENST00000406019 CD86P42081 329 aa4.67□□□□□ -1.66
HMGB1P13-201ENST00000406019 RGS7P49802 495 aa4.67□□□□□ -1.66
HMGB1P13-201ENST00000406019 SLC12A3P55017 1021 aa4.67□□□□□ -1.66
HMGB1P13-201ENST00000406019 MFAP3P55082 362 aa4.67□□□□□ -1.66
HMGB1P13-201ENST00000406019 COG7P83436 770 aa4.67□□□□□ -1.66
HMGB1P13-201ENST00000406019 PDE1BQ01064 536 aa4.67□□□□□ -1.66
HMGB1P13-201ENST00000406019 IL1RL1Q01638 556 aa4.67□□□□□ -1.66
HMGB1P13-201ENST00000406019 TEFQ10587 303 aa4.67□□□□□ -1.66
HMGB1P13-201ENST00000406019 CUL3Q13618 768 aa4.67□□□□□ -1.66
HMGB1P13-201ENST00000406019 PPA1Q15181 289 aa4.67□□□□□ -1.66
HMGB1P13-201ENST00000406019 TTC31Q49AM3 519 aaPredicted RBP4.67□□□□□ -1.66
HMGB1P13-201ENST00000406019 SETMARQ53H47 684 aaPredicted RBP4.67□□□□□ -1.66
HMGB1P13-201ENST00000406019 TCTE1Q5JU00 501 aa4.67□□□□□ -1.66
HMGB1P13-201ENST00000406019 RABEPKQ7Z6M1 372 aa4.67□□□□□ -1.66
HMGB1P13-201ENST00000406019 C1orf87Q8N0U7 546 aa4.67□□□□□ -1.66
HMGB1P13-201ENST00000406019 CLIP4Q8N3C7 705 aa4.67□□□□□ -1.66
HMGB1P13-201ENST00000406019 RTL3Q8N8U3 475 aaKnown RBP4.67□□□□□ -1.66
HMGB1P13-201ENST00000406019 AMER3Q8N944 861 aa4.67□□□□□ -1.66
HMGB1P13-201ENST00000406019 SPATA22Q8NHS9 363 aa4.67□□□□□ -1.66
HMGB1P13-201ENST00000406019 PPP4R1Q8TF05 950 aa4.67□□□□□ -1.66
HMGB1P13-201ENST00000406019 SLC38A5Q8WUX1 472 aa4.67□□□□□ -1.66
HMGB1P13-201ENST00000406019 RIT1Q92963 219 aa4.67□□□□□ -1.66
HMGB1P13-201ENST00000406019 PIGTQ969N2 578 aa4.67□□□□□ -1.66
HMGB1P13-201ENST00000406019 MTERF3Q96E29 417 aa4.67□□□□□ -1.66
HMGB1P13-201ENST00000406019 TSPAN18Q96SJ8 248 aa4.67□□□□□ -1.66
HMGB1P13-201ENST00000406019 TMEM30AQ9NV96 361 aa4.67□□□□□ -1.66
HMGB1P13-201ENST00000406019 HIF1ANQ9NWT6 349 aa4.67□□□□□ -1.66
HMGB1P13-201ENST00000406019 CYP39A1Q9NYL5 469 aa4.67□□□□□ -1.66
HMGB1P13-201ENST00000406019 AKAP7Q9P0M2 348 aaPredicted RBP4.67□□□□□ -1.66
HMGB1P13-201ENST00000406019 WNT16Q9UBV4 365 aa4.67□□□□□ -1.66
HMGB1P13-201ENST00000406019 ELOVL7A1L3X0 281 aa4.66□□□□□ -1.66
HMGB1P13-201ENST00000406019 SMIM30A4D0T7 59 aa4.66□□□□□ -1.66
HMGB1P13-201ENST00000406019 OR5K3A6NET4 321 aa4.66□□□□□ -1.66
HMGB1P13-201ENST00000406019 LILRA5A6NI73 299 aa4.66□□□□□ -1.66
HMGB1P13-201ENST00000406019 VEGFDO43915 354 aa4.66□□□□□ -1.66
HMGB1P13-201ENST00000406019 AKAP3O75969 853 aa4.66□□□□□ -1.66
HMGB1P13-201ENST00000406019 WDPCPO95876 746 aa4.66□□□□□ -1.66
HMGB1P13-201ENST00000406019 GH1P01241 217 aa4.66□□□□□ -1.66
HMGB1P13-201ENST00000406019 INHBAP08476 426 aa4.66□□□□□ -1.66
HMGB1P13-201ENST00000406019 HMOX1P09601 288 aa4.66□□□□□ -1.66
HMGB1P13-201ENST00000406019 SPP1P10451 314 aa4.66□□□□□ -1.66
HMGB1P13-201ENST00000406019 EPCAMP16422 314 aa4.66□□□□□ -1.66
HMGB1P13-201ENST00000406019 VCLP18206 1134 aa4.66□□□□□ -1.66
HMGB1P13-201ENST00000406019 LBPP18428 481 aa4.66□□□□□ -1.66
HMGB1P13-201ENST00000406019 PSMB4P28070 264 aa4.66□□□□□ -1.66
HMGB1P13-201ENST00000406019 PTGER4P35408 488 aa4.66□□□□□ -1.66
HMGB1P13-201ENST00000406019 PCYT1AP49585 367 aa4.66□□□□□ -1.66
HMGB1P13-201ENST00000406019 PDLIM4P50479 330 aa4.66□□□□□ -1.66
HMGB1P13-201ENST00000406019 TPD52P55327 224 aaPredicted RBP4.66□□□□□ -1.66
HMGB1P13-201ENST00000406019 CLDN15P56746 228 aa4.66□□□□□ -1.66
HMGB1P13-201ENST00000406019 ARF5P84085 180 aa4.66□□□□□ -1.66
HMGB1P13-201ENST00000406019 BNC1Q01954 994 aa4.66□□□□□ -1.66
HMGB1P13-201ENST00000406019 PLA2G7Q13093 441 aa4.66□□□□□ -1.66
HMGB1P13-201ENST00000406019 DHX34Q14147 1143 aaKnown RBP4.66□□□□□ -1.66
HMGB1P13-201ENST00000406019 SYT14P1Q58G82 188 aa4.66□□□□□ -1.66
HMGB1P13-201ENST00000406019 MDH1BQ5I0G3 518 aa4.66□□□□□ -1.66
HMGB1P13-201ENST00000406019 LRRC73Q5JTD7 316 aa4.66□□□□□ -1.66
HMGB1P13-201ENST00000406019 EFHC1Q5JVL4 640 aa4.66□□□□□ -1.66
HMGB1P13-201ENST00000406019 SSMEM1Q8WWF3 244 aa4.66□□□□□ -1.66
HMGB1P13-201ENST00000406019 SYN2Q92777 582 aaPredicted RBP4.66□□□□□ -1.66
HMGB1P13-201ENST00000406019 ABTB1Q969K4 478 aaPredicted RBP4.66□□□□□ -1.66
HMGB1P13-201ENST00000406019 DHX58Q96C10 678 aa4.66□□□□□ -1.66
HMGB1P13-201ENST00000406019 TBC1D31Q96DN5 1066 aa4.66□□□□□ -1.66
HMGB1P13-201ENST00000406019 BSCL2Q96G97 398 aaPredicted RBP4.66□□□□□ -1.66
HMGB1P13-201ENST00000406019 CSF3RQ99062 836 aa4.66□□□□□ -1.66
HMGB1P13-201ENST00000406019 MEIS3Q99687 375 aa4.66□□□□□ -1.66
HMGB1P13-201ENST00000406019 GTPBP2Q9BX10 602 aaKnown RBP4.66□□□□□ -1.66
HMGB1P13-201ENST00000406019 TNMDQ9H2S6 317 aa4.66□□□□□ -1.66
HMGB1P13-201ENST00000406019 KLHL1Q9NR64 748 aa4.66□□□□□ -1.66
HMGB1P13-201ENST00000406019 PNPLA3Q9NST1 481 aa4.66□□□□□ -1.66
HMGB1P13-201ENST00000406019 SLCO1C1Q9NYB5 712 aa4.66□□□□□ -1.66
HMGB1P13-201ENST00000406019 LRWD1Q9UFC0 647 aa4.66□□□□□ -1.66
HMGB1P13-201ENST00000406019 C5orf60A6NFR6 353 aa4.65□□□□□ -1.67
HMGB1P13-201ENST00000406019 ANKRD66B4E2M5 251 aa4.65□□□□□ -1.67
HMGB1P13-201ENST00000406019 TMEM178BH3BS89 294 aa4.65□□□□□ -1.67
HMGB1P13-201ENST00000406019 MID1O15344 667 aa4.65□□□□□ -1.67
HMGB1P13-201ENST00000406019 BUD23O43709 281 aaKnown RBP4.65□□□□□ -1.67
HMGB1P13-201ENST00000406019 NME6O75414 186 aaPredicted RBP4.65□□□□□ -1.67
HMGB1P13-201ENST00000406019 P4HA1P13674 534 aa4.65□□□□□ -1.67
HMGB1P13-201ENST00000406019 NME5P56597 212 aa4.65□□□□□ -1.67
HMGB1P13-201ENST00000406019 DSCR9P59020 149 aa4.65□□□□□ -1.67
HMGB1P13-201ENST00000406019 KIF5AQ12840 1032 aa4.65□□□□□ -1.67
HMGB1P13-201ENST00000406019 ZNF155Q12901 538 aaPredicted RBP4.65□□□□□ -1.67
HMGB1P13-201ENST00000406019 SGCBQ16585 318 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms