RNA–Protein interactions for RNA: ENST00000405489.7

ATRAID-202, Transcript of all-trans retinoic acid induced differentiation factor, humanhuman

TSL 1 (best) BASIC

Gene ATRAID, Length 1,059 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRAID-202ENST00000405489 SPHK1Q9NYA1 384 aa12.8□□□□□ -0.36
ATRAID-202ENST00000405489 IL1RAPL1Q9NZN1 696 aa12.8□□□□□ -0.36
ATRAID-202ENST00000405489 PCDHB3Q9Y5E6 796 aa12.8□□□□□ -0.36
ATRAID-202ENST00000405489 MDC1Q14676 2089 aaKnown RBP12.79□□□□□ -0.36
ATRAID-202ENST00000405489 SMAPO00193 183 aa12.79□□□□□ -0.36
ATRAID-202ENST00000405489 SCRG1O75711 98 aa12.79□□□□□ -0.36
ATRAID-202ENST00000405489 MATN4O95460 622 aa12.79□□□□□ -0.36
ATRAID-202ENST00000405489 TTC4O95801 387 aa12.79□□□□□ -0.36
ATRAID-202ENST00000405489 PGAM1P18669 254 aa12.79□□□□□ -0.36
ATRAID-202ENST00000405489 CHRM3P20309 590 aa12.79□□□□□ -0.36
ATRAID-202ENST00000405489 PKLRP30613 574 aa12.79□□□□□ -0.36
ATRAID-202ENST00000405489 CCNFP41002 786 aa12.79□□□□□ -0.36
ATRAID-202ENST00000405489 CYP4F2P78329 520 aa12.79□□□□□ -0.36
ATRAID-202ENST00000405489 MC1RQ01726 317 aa12.79□□□□□ -0.36
ATRAID-202ENST00000405489 CTBP1Q13363 440 aa12.79□□□□□ -0.36
ATRAID-202ENST00000405489 MORF4L2Q15014 288 aa12.79□□□□□ -0.36
ATRAID-202ENST00000405489 SLC5A12Q1EHB4 618 aa12.79□□□□□ -0.36
ATRAID-202ENST00000405489 LINC00303Q3SY05 128 aa12.79□□□□□ -0.36
ATRAID-202ENST00000405489 ZNF789Q5FWF6 425 aa12.79□□□□□ -0.36
ATRAID-202ENST00000405489 IZUMO3Q5VZ72 239 aa12.79□□□□□ -0.36
ATRAID-202ENST00000405489 KLHL7Q8IXQ5 586 aa12.79□□□□□ -0.36
ATRAID-202ENST00000405489 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.79□□□□□ -0.36
ATRAID-202ENST00000405489 SLC22A18Q96BI1 424 aa12.79□□□□□ -0.36
ATRAID-202ENST00000405489 LRFN5Q96NI6 719 aa12.79□□□□□ -0.36
ATRAID-202ENST00000405489 CATSPER2Q96P56 530 aa12.79□□□□□ -0.36
ATRAID-202ENST00000405489 EBNA1BP2Q99848 306 aaKnown RBP12.79□□□□□ -0.36
ATRAID-202ENST00000405489 FANCEQ9HB96 536 aa12.79□□□□□ -0.36
ATRAID-202ENST00000405489 LHX9Q9NQ69 397 aa12.79□□□□□ -0.36
ATRAID-202ENST00000405489 C20orf96Q9NUD7 363 aaPredicted RBP12.79□□□□□ -0.36
ATRAID-202ENST00000405489 KLHL42Q9P2K6 505 aa12.79□□□□□ -0.36
ATRAID-202ENST00000405489 IL17BQ9UHF5 180 aa12.79□□□□□ -0.36
ATRAID-202ENST00000405489 SERTAD3Q9UJW9 196 aa12.79□□□□□ -0.36
ATRAID-202ENST00000405489 KCND3Q9UK17 655 aa12.79□□□□□ -0.36
ATRAID-202ENST00000405489 PLAGL1Q9UM63 463 aa12.79□□□□□ -0.36
ATRAID-202ENST00000405489 COMMD10Q9Y6G5 202 aa12.79□□□□□ -0.36
ATRAID-202ENST00000405489 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.79□□□□□ -0.361e-8■■■■□ 23.8
ATRAID-202ENST00000405489 FASNP49327 2511 aaKnown RBP12.79□□□□□ -0.36
ATRAID-202ENST00000405489 TLN1Q9Y490 2541 aaKnown RBP12.79□□□□□ -0.36
ATRAID-202ENST00000405489 ISM1B1AKI9 464 aa12.78□□□□□ -0.36
ATRAID-202ENST00000405489 C21orf140B9A014 251 aa12.78□□□□□ -0.36
ATRAID-202ENST00000405489 RASGRF2O14827 1237 aa12.78□□□□□ -0.36
ATRAID-202ENST00000405489 NKX2-8O15522 239 aa12.78□□□□□ -0.36
ATRAID-202ENST00000405489 CPNE3O75131 537 aaKnown RBP12.78□□□□□ -0.36
ATRAID-202ENST00000405489 C1orf105O95561 183 aa12.78□□□□□ -0.36
ATRAID-202ENST00000405489 RECKO95980 971 aa12.78□□□□□ -0.36
ATRAID-202ENST00000405489 NTRK1P04629 796 aa12.78□□□□□ -0.36
ATRAID-202ENST00000405489 PVRP15151 417 aa12.78□□□□□ -0.36
ATRAID-202ENST00000405489 F8A1P23610 371 aa12.78□□□□□ -0.36
ATRAID-202ENST00000405489 DLSTP36957 453 aa12.78□□□□□ -0.36
ATRAID-202ENST00000405489 CRYMQ14894 314 aa12.78□□□□□ -0.36
ATRAID-202ENST00000405489 TBR1Q16650 682 aa12.78□□□□□ -0.36
ATRAID-202ENST00000405489 MSS51Q4VC12 460 aa12.78□□□□□ -0.36
ATRAID-202ENST00000405489 ZNF517Q6ZMY9 492 aaPredicted RBP12.78□□□□□ -0.36
ATRAID-202ENST00000405489 TMEM126BQ8IUX1 230 aa12.78□□□□□ -0.36
ATRAID-202ENST00000405489 DENND6AQ8IWF6 608 aa12.78□□□□□ -0.36
ATRAID-202ENST00000405489 PDIK1LQ8N165 341 aa12.78□□□□□ -0.36
ATRAID-202ENST00000405489 ZBTB2Q8N680 514 aa12.78□□□□□ -0.36
ATRAID-202ENST00000405489 LINC01555Q8NAE3 123 aa12.78□□□□□ -0.36
ATRAID-202ENST00000405489 OR2L8Q8NGY9 312 aa12.78□□□□□ -0.36
ATRAID-202ENST00000405489 HMGCLL1Q8TB92 370 aa12.78□□□□□ -0.36
ATRAID-202ENST00000405489 MAGEC3Q8TD91 643 aa12.78□□□□□ -0.36
ATRAID-202ENST00000405489 EXTL1Q92935 676 aa12.78□□□□□ -0.36
ATRAID-202ENST00000405489 MED8Q96G25 268 aa12.78□□□□□ -0.36
ATRAID-202ENST00000405489 FOPNLQ96NB1 174 aa12.78□□□□□ -0.36
ATRAID-202ENST00000405489 FAM167BQ9BTA0 163 aa12.78□□□□□ -0.36
ATRAID-202ENST00000405489 RAB11FIP5Q9BXF6 653 aa12.78□□□□□ -0.36
ATRAID-202ENST00000405489 FAM117AQ9C073 453 aa12.78□□□□□ -0.36
ATRAID-202ENST00000405489 FAM60AQ9NP50 221 aa12.78□□□□□ -0.36
ATRAID-202ENST00000405489 GALPQ9UBC7 116 aa12.78□□□□□ -0.36
ATRAID-202ENST00000405489 CROTQ9UKG9 612 aa12.78□□□□□ -0.36
ATRAID-202ENST00000405489 FBXO5Q9UKT4 447 aa12.78□□□□□ -0.36
ATRAID-202ENST00000405489 PCDHGA6Q9Y5G7 932 aa12.78□□□□□ -0.36
ATRAID-202ENST00000405489 GCN1Q92616 2671 aaKnown RBP12.77□□□□□ -0.36
ATRAID-202ENST00000405489 A0A0J9YY10 115 aa12.77□□□□□ -0.37
ATRAID-202ENST00000405489 E5RI56 91 aa12.77□□□□□ -0.37
ATRAID-202ENST00000405489 PRICKLE3O43900 615 aaPredicted RBP12.77□□□□□ -0.37
ATRAID-202ENST00000405489 TCN2P20062 427 aa12.77□□□□□ -0.37
ATRAID-202ENST00000405489 PEBP1P30086 187 aaKnown RBP12.77□□□□□ -0.37
ATRAID-202ENST00000405489 SLC1A2P43004 574 aa12.77□□□□□ -0.37
ATRAID-202ENST00000405489 GABRA4P48169 554 aa12.77□□□□□ -0.37
ATRAID-202ENST00000405489 CLCN7P51798 805 aa12.77□□□□□ -0.37
ATRAID-202ENST00000405489 ETF1P62495 437 aaKnown RBP12.77□□□□□ -0.37
ATRAID-202ENST00000405489 DHX9Q08211 1270 aaKnown RBP12.77□□□□□ -0.37
ATRAID-202ENST00000405489 CBLBQ13191 982 aa12.77□□□□□ -0.37
ATRAID-202ENST00000405489 LY6DQ14210 128 aa12.77□□□□□ -0.37
ATRAID-202ENST00000405489 HSP90AA5PQ58FG0 334 aa12.77□□□□□ -0.37
ATRAID-202ENST00000405489 ACSBG2Q5FVE4 666 aa12.77□□□□□ -0.37
ATRAID-202ENST00000405489 SPANXN3Q5MJ09 141 aa12.77□□□□□ -0.37
ATRAID-202ENST00000405489 HIBCHQ6NVY1 386 aaPredicted RBP12.77□□□□□ -0.37
ATRAID-202ENST00000405489 ZNF549Q6P9A3 640 aa12.77□□□□□ -0.37
ATRAID-202ENST00000405489 CDHR3Q6ZTQ4 885 aa12.77□□□□□ -0.37
ATRAID-202ENST00000405489 NEK10Q6ZWH5 1172 aa12.77□□□□□ -0.37
ATRAID-202ENST00000405489 RAB42Q8N4Z0 105 aa12.77□□□□□ -0.37
ATRAID-202ENST00000405489 EXD3Q8N9H8 876 aa12.77□□□□□ -0.37
ATRAID-202ENST00000405489 C19orf47Q8N9M1 422 aaKnown RBP12.77□□□□□ -0.37
ATRAID-202ENST00000405489 SLC38A9Q8NBW4 561 aa12.77□□□□□ -0.37
ATRAID-202ENST00000405489 OR1L3Q8NH93 324 aa12.77□□□□□ -0.37
ATRAID-202ENST00000405489 GABPB2Q8TAK5 448 aaPredicted RBP12.77□□□□□ -0.37
ATRAID-202ENST00000405489 SKA2Q8WVK7 121 aaPredicted RBP12.77□□□□□ -0.37
ATRAID-202ENST00000405489 STARD8Q92502 1023 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms