RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 OR4F21O95013 312 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 BCKDHBP21953 392 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 ACADLP28330 430 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 PIK3CGP48736 1102 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 HNMTP50135 292 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 CTBSQ01459 385 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 RPA4Q13156 261 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 ALG11Q2TAA5 492 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 SGO1Q5FBB7 561 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 TCHHL1Q5QJ38 904 aaPredicted RBP3.61□□□□□ -1.83
RTN4-208ENST00000404909 PRAMEF14Q5SWL7 426 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 THEMIS2Q5TEJ8 643 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 CWF19L1Q69YN2 538 aaKnown RBP3.61□□□□□ -1.83
RTN4-208ENST00000404909 AGTRAPQ6RW13 159 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 SUSD1Q6UWL2 747 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 MILR1Q7Z6M3 343 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 SYVN1Q86TM6 617 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 CLYBLQ8N0X4 340 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 OXR1Q8N573 874 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 METTL6Q8TCB7 284 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 AGAP11Q8TF27 550 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 CCT6BQ92526 530 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 EDAQ92838 391 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 KLHDC7BQ96G42 594 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 PRR11Q96HE9 360 aaPredicted RBP3.61□□□□□ -1.83
RTN4-208ENST00000404909 CCDC138Q96M89 665 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 OR52B2Q96RD2 323 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 FERD3LQ96RJ6 166 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 TIMM29Q9BSF4 260 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 TCEAL2Q9H3H9 227 aaPredicted RBP3.61□□□□□ -1.83
RTN4-208ENST00000404909 ACTR8Q9H981 624 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 TCF7L2Q9NQB0 619 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 DNAJC28Q9NX36 388 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 STOX2Q9P2F5 926 aaPredicted RBP3.61□□□□□ -1.83
RTN4-208ENST00000404909 VTI1BQ9UEU0 232 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 ZFP69BQ9UJL9 534 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 ZNF225Q9UK10 706 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 ACSL5Q9ULC5 683 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 DMTF1Q9Y222 760 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 DNAJC15Q9Y5T4 150 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 ST14Q9Y5Y6 855 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 DNMT3AQ9Y6K1 912 aaPredicted RBP3.61□□□□□ -1.83
RTN4-208ENST00000404909 TDRD6O60522 2096 aaKnown RBP3.61□□□□□ -1.83
RTN4-208ENST00000404909 ARHGEF17Q96PE2 2063 aaPredicted RBP3.61□□□□□ -1.83
RTN4-208ENST00000404909 PRAMEF33A0A0G2JMD5 474 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 METTL12A8MUP2 240 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 SLCO1B7G3V0H7 640 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 OR7A17O14581 309 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 ZNF195O14628 629 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 DCXO43602 365 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 SNUPNO95149 360 aaKnown RBP3.61□□□□□ -1.83
RTN4-208ENST00000404909 ESRRBO95718 433 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 OTCP00480 354 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 CAPN1P07384 714 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 LINC00032P0C843 101 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 IMPA1P29218 277 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 MAPK9P45984 424 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 FNTBP49356 437 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 ERVPABLB-1P60509 514 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 YPEL5P62699 121 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 BTKQ06187 659 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 GALNT1Q10472 559 aaPredicted RBP3.61□□□□□ -1.83
RTN4-208ENST00000404909 C1orf61Q13536 156 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 PTK2BQ14289 1009 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 CLCA4Q14CN2 919 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 CPSF6Q16630 551 aaKnown RBP eCLIP3.61□□□□□ -1.831e-10■□□□□ 11.3
RTN4-208ENST00000404909 LETMD1Q6P1Q0 360 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 EPGNQ6UW88 154 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 ACAD11Q709F0 780 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 ABI3BPQ7Z7G0 1075 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 PHACTR4Q8IZ21 702 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 TCAIMQ8N3R3 496 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 OR4F6Q8NGB9 312 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 OR9A1PQ8NGU1 263 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 TWIST2Q8WVJ9 160 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 ATL1Q8WXF7 558 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 MTFMTQ96DP5 389 aaKnown RBP3.61□□□□□ -1.83
RTN4-208ENST00000404909 MARK4Q96L34 752 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 INSM2Q96T92 566 aaPredicted RBP3.61□□□□□ -1.83
RTN4-208ENST00000404909 SIKE1Q9BRV8 207 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 ACAT2Q9BWD1 397 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 C1QTNF3Q9BXJ4 246 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 NMUR2Q9GZQ4 415 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 MYLK2Q9H1R3 596 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 SLC32A1Q9H598 525 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 INTS7Q9NVH2 962 aaKnown RBP3.61□□□□□ -1.83
RTN4-208ENST00000404909 TBC1D29Q9UFV1 150 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 EPB41L3Q9Y2J2 1087 aaPredicted RBP3.61□□□□□ -1.83
RTN4-208ENST00000404909 ZFC3H1O60293 1989 aaKnown RBP3.61□□□□□ -1.83
RTN4-208ENST00000404909 TRPC5OSA6NMA1 111 aa3.6□□□□□ -1.83
RTN4-208ENST00000404909 FCHO1O14526 889 aa3.6□□□□□ -1.83
RTN4-208ENST00000404909 PIP5K1BO14986 540 aa3.6□□□□□ -1.83
RTN4-208ENST00000404909 LAMTOR5O43504 91 aa3.6□□□□□ -1.83
RTN4-208ENST00000404909 UBOX5O94941 541 aa3.6□□□□□ -1.83
RTN4-208ENST00000404909 CHEK2O96017 543 aa3.6□□□□□ -1.83
RTN4-208ENST00000404909 TNFP01375 233 aa3.6□□□□□ -1.83
RTN4-208ENST00000404909 RPN2P04844 631 aa3.6□□□□□ -1.83
RTN4-208ENST00000404909 HOXC4P09017 264 aaPredicted RBP3.6□□□□□ -1.83
RTN4-208ENST00000404909 CTSEP14091 401 aa3.6□□□□□ -1.83
RTN4-208ENST00000404909 AOC1P19801 751 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms