RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 ENPP5Q9UJA9 477 aa10.5□□□□□ -0.73
CLIP4-204ENST00000404424 ERGIC3Q9Y282 383 aa10.5□□□□□ -0.73
CLIP4-204ENST00000404424 COQ6Q9Y2Z9 468 aa10.5□□□□□ -0.73
CLIP4-204ENST00000404424 PRSS21Q9Y6M0 314 aa10.5□□□□□ -0.73
CLIP4-204ENST00000404424 C1orf232A0A0U1RR37 186 aa10.49□□□□□ -0.73
CLIP4-204ENST00000404424 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.49□□□□□ -0.73
CLIP4-204ENST00000404424 WNT9AO14904 365 aa10.49□□□□□ -0.73
CLIP4-204ENST00000404424 PER2O15055 1255 aa10.49□□□□□ -0.73
CLIP4-204ENST00000404424 UGT2B11O75310 529 aa10.49□□□□□ -0.73
CLIP4-204ENST00000404424 SULT1C4O75897 302 aa10.49□□□□□ -0.73
CLIP4-204ENST00000404424 CLDN9O95484 217 aa10.49□□□□□ -0.73
CLIP4-204ENST00000404424 SERPINA1P01009 418 aa10.49□□□□□ -0.73
CLIP4-204ENST00000404424 GALTP07902 379 aa10.49□□□□□ -0.73
CLIP4-204ENST00000404424 ANXA5P08758 320 aa10.49□□□□□ -0.73
CLIP4-204ENST00000404424 ALPIP09923 528 aa10.49□□□□□ -0.73
CLIP4-204ENST00000404424 BCKDHAP12694 445 aa10.49□□□□□ -0.73
CLIP4-204ENST00000404424 PCMT1P22061 227 aa10.49□□□□□ -0.73
CLIP4-204ENST00000404424 MZF1P28698 734 aaPredicted RBP10.49□□□□□ -0.73
CLIP4-204ENST00000404424 MAGEA2P43356 314 aa10.49□□□□□ -0.73
CLIP4-204ENST00000404424 MAPK10P53779 464 aa10.49□□□□□ -0.73
CLIP4-204ENST00000404424 VAC14Q08AM6 782 aa10.49□□□□□ -0.73
CLIP4-204ENST00000404424 ABHD18Q0P651 414 aa10.49□□□□□ -0.73
CLIP4-204ENST00000404424 LAPTM5Q13571 262 aa10.49□□□□□ -0.73
CLIP4-204ENST00000404424 NR1D2Q14995 579 aa10.49□□□□□ -0.73
CLIP4-204ENST00000404424 RGS21Q2M5E4 152 aa10.49□□□□□ -0.73
CLIP4-204ENST00000404424 RGMBQ6NW40 437 aa10.49□□□□□ -0.73
CLIP4-204ENST00000404424 RBM23Q86U06 439 aaKnown RBP10.49□□□□□ -0.73
CLIP4-204ENST00000404424 ELMOD1Q8N336 334 aa10.49□□□□□ -0.73
CLIP4-204ENST00000404424 KRTCAP2Q8N6L1 136 aa10.49□□□□□ -0.73
CLIP4-204ENST00000404424 SETD9Q8NE22 299 aa10.49□□□□□ -0.73
CLIP4-204ENST00000404424 REXO5Q96IC2 774 aaKnown RBP10.49□□□□□ -0.73
CLIP4-204ENST00000404424 ITCHQ96J02 903 aa10.49□□□□□ -0.73
CLIP4-204ENST00000404424 PARVBQ9HBI1 364 aa10.49□□□□□ -0.73
CLIP4-204ENST00000404424 CRLS1Q9UJA2 301 aa10.49□□□□□ -0.73
CLIP4-204ENST00000404424 UTS2RQ9UKP6 389 aa10.49□□□□□ -0.73
CLIP4-204ENST00000404424 FCF1Q9Y324 198 aaKnown RBP10.49□□□□□ -0.73
CLIP4-204ENST00000404424 HSPE1-MOB4S4R3N1 261 aa10.49□□□□□ -0.73
CLIP4-204ENST00000404424 NDUFS2O75306 463 aa10.49□□□□□ -0.73
CLIP4-204ENST00000404424 BCAS1O75363 584 aaPredicted RBP10.49□□□□□ -0.73
CLIP4-204ENST00000404424 TRBC1P01850 177 aa10.49□□□□□ -0.73
CLIP4-204ENST00000404424 PRKAR2AP13861 404 aaKnown RBP10.49□□□□□ -0.73
CLIP4-204ENST00000404424 HMGA1P17096 107 aaKnown RBP10.49□□□□□ -0.73
CLIP4-204ENST00000404424 S100A3P33764 101 aa10.49□□□□□ -0.73
CLIP4-204ENST00000404424 MAPK8P45983 427 aa10.49□□□□□ -0.73
CLIP4-204ENST00000404424 KCNC4Q03721 635 aa10.49□□□□□ -0.73
CLIP4-204ENST00000404424 OCA2Q04671 838 aa10.49□□□□□ -0.73
CLIP4-204ENST00000404424 SFSWAPQ12872 951 aaKnown RBP10.49□□□□□ -0.73
CLIP4-204ENST00000404424 ACOX1Q15067 660 aa10.49□□□□□ -0.73
CLIP4-204ENST00000404424 SLC44A4Q53GD3 710 aa10.49□□□□□ -0.73
CLIP4-204ENST00000404424 ATXN7L2Q5T6C5 722 aaPredicted RBP10.49□□□□□ -0.73
CLIP4-204ENST00000404424 LAIR2Q6ISS4 152 aa10.49□□□□□ -0.73
CLIP4-204ENST00000404424 SHQ1Q6PI26 577 aaKnown RBP10.49□□□□□ -0.73
CLIP4-204ENST00000404424 PRSS55Q6UWB4 352 aaPredicted RBP10.49□□□□□ -0.73
CLIP4-204ENST00000404424 DNAJC14Q6Y2X3 702 aaPredicted RBP10.49□□□□□ -0.73
CLIP4-204ENST00000404424 MSANTD1Q6ZTZ1 278 aa10.49□□□□□ -0.73
CLIP4-204ENST00000404424 PHACTR4Q8IZ21 702 aa10.49□□□□□ -0.73
CLIP4-204ENST00000404424 CBARPQ8N350 705 aaPredicted RBP10.49□□□□□ -0.73
CLIP4-204ENST00000404424 KLHL23Q8NBE8 558 aa10.49□□□□□ -0.73
CLIP4-204ENST00000404424 NETO1Q8TDF5 533 aa10.49□□□□□ -0.73
CLIP4-204ENST00000404424 SGCDQ92629 289 aa10.49□□□□□ -0.73
CLIP4-204ENST00000404424 CCDC97Q96F63 343 aaPredicted RBP10.49□□□□□ -0.73
CLIP4-204ENST00000404424 MRPL9Q9BYD2 267 aaKnown RBP10.49□□□□□ -0.73
CLIP4-204ENST00000404424 GABARAPL1Q9H0R8 117 aa10.49□□□□□ -0.73
CLIP4-204ENST00000404424 IL26Q9NPH9 171 aa10.49□□□□□ -0.73
CLIP4-204ENST00000404424 DNMT3BQ9UBC3 853 aaKnown RBP10.49□□□□□ -0.73
CLIP4-204ENST00000404424 EVLQ9UI08 416 aaPredicted RBP10.49□□□□□ -0.73
CLIP4-204ENST00000404424 VPS51Q9UID3 782 aa10.49□□□□□ -0.73
CLIP4-204ENST00000404424 TMEFF2Q9UIK5 374 aaPredicted RBP10.49□□□□□ -0.73
CLIP4-204ENST00000404424 SAMD4AQ9UPU9 718 aaKnown RBP10.49□□□□□ -0.73
CLIP4-204ENST00000404424 ERVW-1Q9UQF0 538 aa10.49□□□□□ -0.73
CLIP4-204ENST00000404424 OR51B4Q9Y5P0 310 aa10.49□□□□□ -0.73
CLIP4-204ENST00000404424 GLYATL1P3A0A0U1RQE8 302 aa10.48□□□□□ -0.73
CLIP4-204ENST00000404424 FUOMA2VDF0 154 aa10.48□□□□□ -0.73
CLIP4-204ENST00000404424 ZNF99A8MXY4 864 aaPredicted RBP10.48□□□□□ -0.73
CLIP4-204ENST00000404424 NT5C1B-RDH14C9J2C7 533 aa10.48□□□□□ -0.73
CLIP4-204ENST00000404424 BCKDKO14874 412 aa10.48□□□□□ -0.73
CLIP4-204ENST00000404424 AREL1O15033 823 aa10.48□□□□□ -0.73
CLIP4-204ENST00000404424 CA12O43570 354 aa10.48□□□□□ -0.73
CLIP4-204ENST00000404424 TBL1XO60907 577 aa10.48□□□□□ -0.73
CLIP4-204ENST00000404424 CCNDBP1O95273 360 aa10.48□□□□□ -0.73
CLIP4-204ENST00000404424 IRF1P10914 325 aa10.48□□□□□ -0.73
CLIP4-204ENST00000404424 AGXTP21549 392 aa10.48□□□□□ -0.73
CLIP4-204ENST00000404424 PRPH2P23942 346 aa10.48□□□□□ -0.73
CLIP4-204ENST00000404424 HTR1BP28222 390 aa10.48□□□□□ -0.73
CLIP4-204ENST00000404424 MAPK1P28482 360 aa10.48□□□□□ -0.73
CLIP4-204ENST00000404424 ARHGDIAP52565 204 aa10.48□□□□□ -0.73
CLIP4-204ENST00000404424 PTPN5P54829 565 aa10.48□□□□□ -0.73
CLIP4-204ENST00000404424 CXCR4P61073 352 aa10.48□□□□□ -0.73
CLIP4-204ENST00000404424 PRKCZQ05513 592 aa10.48□□□□□ -0.73
CLIP4-204ENST00000404424 BCL2L1Q07817 233 aa10.48□□□□□ -0.73
CLIP4-204ENST00000404424 SREBF2Q12772 1141 aa10.48□□□□□ -0.73
CLIP4-204ENST00000404424 CDK5R2Q13319 367 aa10.48□□□□□ -0.73
CLIP4-204ENST00000404424 ZNF846Q147U1 533 aa10.48□□□□□ -0.73
CLIP4-204ENST00000404424 DPY19L1Q2PZI1 675 aa10.48□□□□□ -0.73
CLIP4-204ENST00000404424 GTDC1Q4AE62 458 aa10.48□□□□□ -0.73
CLIP4-204ENST00000404424 GGTA1PQ4G0N0 100 aa10.48□□□□□ -0.73
CLIP4-204ENST00000404424 SGO1Q5FBB7 561 aa10.48□□□□□ -0.73
CLIP4-204ENST00000404424 NIPAL1Q6NVV3 410 aa10.48□□□□□ -0.73
CLIP4-204ENST00000404424 SLC16A12Q6ZSM3 486 aa10.48□□□□□ -0.73
CLIP4-204ENST00000404424 DET1Q7L5Y6 550 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms