RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 OR9A1PQ8NGU1 263 aa28.47■■■□□ 2.15
USP42-202ENST00000404008 UNKQ9C0B0 810 aaKnown RBP28.47■■■□□ 2.15
USP42-202ENST00000404008 VPS11Q9H270 941 aa28.47■■■□□ 2.15
USP42-202ENST00000404008 IGSF5Q9NSI5 407 aa28.47■■■□□ 2.15
USP42-202ENST00000404008 ATXN7L1Q9ULK2 861 aaPredicted RBP28.47■■■□□ 2.15
USP42-202ENST00000404008 NOVA2Q9UNW9 492 aaKnown RBP28.47■■■□□ 2.15
USP42-202ENST00000404008 PDE10AQ9Y233 779 aa28.47■■■□□ 2.15
USP42-202ENST00000404008 ANKRD12Q6UB98 2062 aa28.46■■■□□ 2.15
USP42-202ENST00000404008 TLDC2A0PJX2 215 aa28.46■■■□□ 2.15
USP42-202ENST00000404008 CPNE6O95741 557 aa28.46■■■□□ 2.15
USP42-202ENST00000404008 LTA4HP09960 611 aaKnown RBP28.46■■■□□ 2.15
USP42-202ENST00000404008 H2AFXP16104 143 aaPredicted RBP28.46■■■□□ 2.15
USP42-202ENST00000404008 PPM1FP49593 454 aaPredicted RBP28.46■■■□□ 2.15
USP42-202ENST00000404008 SPIDRQ14159 915 aa28.46■■■□□ 2.15
USP42-202ENST00000404008 CLPPQ16740 277 aaPredicted RBP28.46■■■□□ 2.15
USP42-202ENST00000404008 PHKG1Q16816 387 aa28.46■■■□□ 2.15
USP42-202ENST00000404008 PPP1R3AQ16821 1122 aa28.46■■■□□ 2.15
USP42-202ENST00000404008 WDR74Q6RFH5 385 aaPredicted RBP28.46■■■□□ 2.15
USP42-202ENST00000404008 USP53Q70EK8 1073 aa28.46■■■□□ 2.15
USP42-202ENST00000404008 MCOLN3Q8TDD5 553 aa28.46■■■□□ 2.15
USP42-202ENST00000404008 DENND1AQ8TEH3 1009 aa28.46■■■□□ 2.15
USP42-202ENST00000404008 PKP4Q99569 1192 aa28.46■■■□□ 2.15
USP42-202ENST00000404008 NUDT22Q9BRQ3 303 aa28.46■■■□□ 2.15
USP42-202ENST00000404008 RDH14Q9HBH5 336 aa28.46■■■□□ 2.15
USP42-202ENST00000404008 OR6C74A6NCV1 312 aa28.45■■■□□ 2.14
USP42-202ENST00000404008 OR5K3A6NET4 321 aa28.45■■■□□ 2.14
USP42-202ENST00000404008 D6RAR5 112 aa28.45■■■□□ 2.14
USP42-202ENST00000404008 ENO2P09104 434 aaPredicted RBP28.45■■■□□ 2.14
USP42-202ENST00000404008 ZNF844Q08AG5 666 aa28.45■■■□□ 2.14
USP42-202ENST00000404008 TSNQ15631 228 aaKnown RBP28.45■■■□□ 2.14
USP42-202ENST00000404008 CDCP2Q5VXM1 449 aa28.45■■■□□ 2.14
USP42-202ENST00000404008 TMPRSS9Q7Z410 1059 aa28.45■■■□□ 2.14
USP42-202ENST00000404008 ADAMTSL2Q86TH1 951 aa28.45■■■□□ 2.14
USP42-202ENST00000404008 OOSP2Q86WS3 158 aa28.45■■■□□ 2.14
USP42-202ENST00000404008 KCTD4Q8WVF5 259 aa28.45■■■□□ 2.14
USP42-202ENST00000404008 NCSTNQ92542 709 aa28.45■■■□□ 2.14
USP42-202ENST00000404008 IL17FQ96PD4 163 aa28.45■■■□□ 2.14
USP42-202ENST00000404008 ZIM3Q96PE6 472 aa28.45■■■□□ 2.14
USP42-202ENST00000404008 RAB11FIP5Q9BXF6 653 aa28.45■■■□□ 2.14
USP42-202ENST00000404008 NMRAL1Q9HBL8 299 aa28.45■■■□□ 2.14
USP42-202ENST00000404008 ARGLU1Q9NWB6 273 aaPredicted RBP28.45■■■□□ 2.14
USP42-202ENST00000404008 HRASLS2Q9NWW9 162 aa28.45■■■□□ 2.14
USP42-202ENST00000404008 OR6C2Q9NZP2 312 aa28.45■■■□□ 2.14
USP42-202ENST00000404008 SPATA7Q9P0W8 599 aa28.45■■■□□ 2.14
USP42-202ENST00000404008 LGALS13Q9UHV8 139 aa28.45■■■□□ 2.14
USP42-202ENST00000404008 PTPRBP23467 1997 aa28.45■■■□□ 2.14
USP42-202ENST00000404008 KLHL2O95198 593 aa28.44■■■□□ 2.14
USP42-202ENST00000404008 SYF2O95926 243 aaKnown RBP28.44■■■□□ 2.14
USP42-202ENST00000404008 ADGRF3Q8IZF5 1079 aa28.44■■■□□ 2.14
USP42-202ENST00000404008 ADAMTS14Q8WXS8 1223 aa28.44■■■□□ 2.14
USP42-202ENST00000404008 PTERQ96BW5 349 aa28.44■■■□□ 2.14
USP42-202ENST00000404008 NXNL1Q96CM4 212 aa28.44■■■□□ 2.14
USP42-202ENST00000404008 CABS1Q96KC9 395 aa28.44■■■□□ 2.14
USP42-202ENST00000404008 TWSG1Q9GZX9 223 aa28.44■■■□□ 2.14
USP42-202ENST00000404008 RAB33BQ9H082 229 aa28.44■■■□□ 2.14
USP42-202ENST00000404008 BTN3A3O00478 584 aa28.43■■■□□ 2.14
USP42-202ENST00000404008 ERGP11308 486 aa28.43■■■□□ 2.14
USP42-202ENST00000404008 FAM83EQ2M2I3 478 aa28.43■■■□□ 2.14
USP42-202ENST00000404008 RBM44Q6ZP01 1051 aaKnown RBP28.43■■■□□ 2.14
USP42-202ENST00000404008 RAB42Q8N4Z0 105 aa28.43■■■□□ 2.14
USP42-202ENST00000404008 LINC01555Q8NAE3 123 aa28.43■■■□□ 2.14
USP42-202ENST00000404008 OR2L8Q8NGY9 312 aa28.43■■■□□ 2.14
USP42-202ENST00000404008 KIAA1191Q96A73 305 aa28.43■■■□□ 2.14
USP42-202ENST00000404008 DPYSL5Q9BPU6 564 aa28.43■■■□□ 2.14
USP42-202ENST00000404008 ZMYND15Q9H091 742 aa28.43■■■□□ 2.14
USP42-202ENST00000404008 EPHA6Q9UF33 1036 aa28.43■■■□□ 2.14
USP42-202ENST00000404008 A0A1W2PPM1 405 aa28.42■■■□□ 2.14
USP42-202ENST00000404008 FOXO6A8MYZ6 492 aa28.42■■■□□ 2.14
USP42-202ENST00000404008 SLC16A8O95907 504 aa28.42■■■□□ 2.14
USP42-202ENST00000404008 MT-ND3P03897 115 aa28.42■■■□□ 2.14
USP42-202ENST00000404008 HIST1H2AGP0C0S8 130 aaPredicted RBP28.42■■■□□ 2.14
USP42-202ENST00000404008 COL6A2P12110 1019 aa28.42■■■□□ 2.14
USP42-202ENST00000404008 HOXB3P14651 431 aaPredicted RBP28.42■■■□□ 2.14
USP42-202ENST00000404008 KRT15P19012 456 aa28.42■■■□□ 2.14
USP42-202ENST00000404008 POLR2CP19387 275 aaPredicted RBP28.42■■■□□ 2.14
USP42-202ENST00000404008 HIST1H2ADP20671 130 aa28.42■■■□□ 2.14
USP42-202ENST00000404008 AP1S2P56377 157 aa28.42■■■□□ 2.14
USP42-202ENST00000404008 ARHGAP19Q14CB8 494 aa28.42■■■□□ 2.14
USP42-202ENST00000404008 OR4D1Q15615 310 aa28.42■■■□□ 2.14
USP42-202ENST00000404008 CYP2A13Q16696 494 aa28.42■■■□□ 2.14
USP42-202ENST00000404008 ANKS6Q68DC2 871 aa28.42■■■□□ 2.14
USP42-202ENST00000404008 FBXO38Q6PIJ6 1188 aa28.42■■■□□ 2.14
USP42-202ENST00000404008 LRIG3Q6UXM1 1119 aa28.42■■■□□ 2.14
USP42-202ENST00000404008 ZNF574Q6ZN55 896 aaPredicted RBP28.42■■■□□ 2.14
USP42-202ENST00000404008 CLEC14AQ86T13 490 aa28.42■■■□□ 2.14
USP42-202ENST00000404008 PLD6Q8N2A8 252 aaKnown RBP28.42■■■□□ 2.14
USP42-202ENST00000404008 ACMSDQ8TDX5 336 aa28.42■■■□□ 2.14
USP42-202ENST00000404008 HIST1H2AHQ96KK5 128 aa28.42■■■□□ 2.14
USP42-202ENST00000404008 CCDC138Q96M89 665 aa28.42■■■□□ 2.14
USP42-202ENST00000404008 GPR78Q96P69 363 aa28.42■■■□□ 2.14
USP42-202ENST00000404008 HIST1H2AJQ99878 128 aa28.42■■■□□ 2.14
USP42-202ENST00000404008 H2AFJQ9BTM1 129 aa28.42■■■□□ 2.14
USP42-202ENST00000404008 TRIM54Q9BYV2 358 aa28.42■■■□□ 2.14
USP42-202ENST00000404008 PCMTD2Q9NV79 361 aa28.42■■■□□ 2.14
USP42-202ENST00000404008 TMEM9Q9P0T7 183 aa28.42■■■□□ 2.14
USP42-202ENST00000404008 LNPEPQ9UIQ6 1025 aa28.42■■■□□ 2.14
USP42-202ENST00000404008 OARD1Q9Y530 152 aa28.42■■■□□ 2.14
USP42-202ENST00000404008 MN1Q10571 1320 aaPredicted RBP28.42■■■□□ 2.14
USP42-202ENST00000404008 CHRM5P08912 532 aaPredicted RBP28.41■■■□□ 2.14
USP42-202ENST00000404008 TFEBP19484 476 aa28.41■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms