RNA–Protein interactions for RNA: ENST00000400772.6

ATG4B-203, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-203ENST00000400772 UNC5DQ6UXZ4 953 aa15.31■□□□□ 0.04
ATG4B-203ENST00000400772 CENPUQ71F23 418 aa15.31■□□□□ 0.04
ATG4B-203ENST00000400772 SDCCAG8Q86SQ7 713 aaPredicted RBP15.31■□□□□ 0.04
ATG4B-203ENST00000400772 FAM20CQ8IXL6 584 aa15.31■□□□□ 0.04
ATG4B-203ENST00000400772 NAT8LQ8N9F0 302 aa15.31■□□□□ 0.04
ATG4B-203ENST00000400772 C19orf47Q8N9M1 422 aaKnown RBP15.31■□□□□ 0.04
ATG4B-203ENST00000400772 APOBEC4Q8WW27 367 aaKnown RBP15.31■□□□□ 0.04
ATG4B-203ENST00000400772 MR1Q95460 341 aa15.31■□□□□ 0.04
ATG4B-203ENST00000400772 IL17FQ96PD4 163 aa15.31■□□□□ 0.04
ATG4B-203ENST00000400772 GPR87Q9BY21 358 aa15.31■□□□□ 0.04
ATG4B-203ENST00000400772 CHRNA10Q9GZZ6 450 aa15.31■□□□□ 0.04
ATG4B-203ENST00000400772 CHST8Q9H2A9 424 aa15.31■□□□□ 0.04
ATG4B-203ENST00000400772 ACTL8Q9H568 366 aa15.31■□□□□ 0.04
ATG4B-203ENST00000400772 PCMTD2Q9NV79 361 aa15.31■□□□□ 0.04
ATG4B-203ENST00000400772 GALPQ9UBC7 116 aa15.31■□□□□ 0.04
ATG4B-203ENST00000400772 TUBD1Q9UJT1 453 aa15.31■□□□□ 0.04
ATG4B-203ENST00000400772 SERTAD3Q9UJW9 196 aa15.31■□□□□ 0.04
ATG4B-203ENST00000400772 KCNMB2Q9Y691 235 aa15.31■□□□□ 0.04
ATG4B-203ENST00000400772 NFS1Q9Y697 457 aa15.31■□□□□ 0.04
ATG4B-203ENST00000400772 ZNF462Q96JM2 2506 aa15.31■□□□□ 0.04
ATG4B-203ENST00000400772 A0A0J9YY10 115 aa15.3■□□□□ 0.04
ATG4B-203ENST00000400772 ZCWPW2A0A1B0GU75 182 aa15.3■□□□□ 0.04
ATG4B-203ENST00000400772 FAM237BA0A1B0GVD1 139 aa15.3■□□□□ 0.04
ATG4B-203ENST00000400772 MAGEB16A2A368 324 aa15.3■□□□□ 0.04
ATG4B-203ENST00000400772 CDC14CA4D256 554 aa15.3■□□□□ 0.04
ATG4B-203ENST00000400772 SDR42E2A6NKP2 422 aa15.3■□□□□ 0.04
ATG4B-203ENST00000400772 ISM1B1AKI9 464 aa15.3■□□□□ 0.04
ATG4B-203ENST00000400772 KIF5CO60282 957 aa15.3■□□□□ 0.04
ATG4B-203ENST00000400772 NIPSNAP2O75323 286 aa15.3■□□□□ 0.04
ATG4B-203ENST00000400772 CAPN1P07384 714 aa15.3■□□□□ 0.04
ATG4B-203ENST00000400772 F7P08709 466 aaPredicted RBP15.3■□□□□ 0.04
ATG4B-203ENST00000400772 CD9P21926 228 aa15.3■□□□□ 0.04
ATG4B-203ENST00000400772 PTPN4P29074 926 aa15.3■□□□□ 0.04
ATG4B-203ENST00000400772 FNTAP49354 379 aa15.3■□□□□ 0.04
ATG4B-203ENST00000400772 ADARP55265 1226 aaKnown RBP15.3■□□□□ 0.04
ATG4B-203ENST00000400772 DHX34Q14147 1143 aaKnown RBP15.3■□□□□ 0.04
ATG4B-203ENST00000400772 GBX1Q14549 363 aa15.3■□□□□ 0.04
ATG4B-203ENST00000400772 KIR2DS3Q14952 304 aa15.3■□□□□ 0.04
ATG4B-203ENST00000400772 TMED2Q15363 201 aa15.3■□□□□ 0.04
ATG4B-203ENST00000400772 SLC5A12Q1EHB4 618 aa15.3■□□□□ 0.04
ATG4B-203ENST00000400772 IZUMO3Q5VZ72 239 aa15.3■□□□□ 0.04
ATG4B-203ENST00000400772 NEPROQ6NW34 567 aa15.3■□□□□ 0.04
ATG4B-203ENST00000400772 CASC4Q6P4E1 433 aa15.3■□□□□ 0.04
ATG4B-203ENST00000400772 OTOAQ7RTW8 1153 aa15.3■□□□□ 0.04
ATG4B-203ENST00000400772 CILP2Q8IUL8 1156 aa15.3■□□□□ 0.04
ATG4B-203ENST00000400772 DCUN1D3Q8IWE4 304 aa15.3■□□□□ 0.04
ATG4B-203ENST00000400772 C2orf73Q8N5S3 287 aaPredicted RBP15.3■□□□□ 0.04
ATG4B-203ENST00000400772 OTUD6BQ8N6M0 293 aa15.3■□□□□ 0.04
ATG4B-203ENST00000400772 TCTN2Q96GX1 697 aa15.3■□□□□ 0.04
ATG4B-203ENST00000400772 TCF12Q99081 682 aa15.3■□□□□ 0.04
ATG4B-203ENST00000400772 SPRTNQ9H040 489 aaPredicted RBP15.3■□□□□ 0.04
ATG4B-203ENST00000400772 XAB2Q9HCS7 855 aaKnown RBP15.3■□□□□ 0.04
ATG4B-203ENST00000400772 FARSAQ9Y285 508 aaKnown RBP15.3■□□□□ 0.04
ATG4B-203ENST00000400772 CRYL1Q9Y2S2 319 aa15.3■□□□□ 0.04
ATG4B-203ENST00000400772 SEC16AO15027 2179 aa15.29■□□□□ 0.04
ATG4B-203ENST00000400772 E7EQ34 232 aa15.29■□□□□ 0.04
ATG4B-203ENST00000400772 KPNA5O15131 536 aa15.29■□□□□ 0.04
ATG4B-203ENST00000400772 MAP3K7O43318 606 aa15.29■□□□□ 0.04
ATG4B-203ENST00000400772 ZNF749O43361 778 aa15.29■□□□□ 0.04
ATG4B-203ENST00000400772 KDM1AO60341 852 aa15.29■□□□□ 0.04
ATG4B-203ENST00000400772 C1orf105O95561 183 aa15.29■□□□□ 0.04
ATG4B-203ENST00000400772 S1PR4O95977 384 aa15.29■□□□□ 0.04
ATG4B-203ENST00000400772 RPN2P04844 631 aa15.29■□□□□ 0.04
ATG4B-203ENST00000400772 KLK3P07288 261 aaPredicted RBP15.29■□□□□ 0.04
ATG4B-203ENST00000400772 OGNP20774 298 aaKnown RBP15.29■□□□□ 0.04
ATG4B-203ENST00000400772 ITGA1P56199 1179 aa15.29■□□□□ 0.04
ATG4B-203ENST00000400772 DEFB110Q30KQ9 67 aa15.29■□□□□ 0.04
ATG4B-203ENST00000400772 CCSMST1Q4G0I0 132 aa15.29■□□□□ 0.04
ATG4B-203ENST00000400772 RNF187Q5TA31 235 aaPredicted RBP15.29■□□□□ 0.04
ATG4B-203ENST00000400772 ZNF385CQ66K41 422 aaPredicted RBP15.29■□□□□ 0.04
ATG4B-203ENST00000400772 HOOK3Q86VS8 718 aa15.29■□□□□ 0.04
ATG4B-203ENST00000400772 SPNS2Q8IVW8 549 aa15.29■□□□□ 0.04
ATG4B-203ENST00000400772 DNAJC22Q8N4W6 341 aa15.29■□□□□ 0.04
ATG4B-203ENST00000400772 OR2L8Q8NGY9 312 aa15.29■□□□□ 0.04
ATG4B-203ENST00000400772 ZNF669Q96BR6 464 aaPredicted RBP15.29■□□□□ 0.04
ATG4B-203ENST00000400772 FAM136AQ96C01 138 aa15.29■□□□□ 0.04
ATG4B-203ENST00000400772 CLIP3Q96DZ5 547 aa15.29■□□□□ 0.04
ATG4B-203ENST00000400772 PDLIM2Q96JY6 352 aa15.29■□□□□ 0.04
ATG4B-203ENST00000400772 SIGLEC10Q96LC7 697 aa15.29■□□□□ 0.04
ATG4B-203ENST00000400772 FAM117AQ9C073 453 aa15.29■□□□□ 0.04
ATG4B-203ENST00000400772 ACTR5Q9H9F9 607 aaPredicted RBP15.29■□□□□ 0.04
ATG4B-203ENST00000400772 RUVBL2Q9Y230 463 aaKnown RBP15.29■□□□□ 0.04
ATG4B-203ENST00000400772 POLHQ9Y253 713 aa15.29■□□□□ 0.04
ATG4B-203ENST00000400772 KLHL20Q9Y2M5 609 aa15.29■□□□□ 0.04
ATG4B-203ENST00000400772 SNRNP200O75643 2136 aaKnown RBP15.29■□□□□ 0.04
ATG4B-203ENST00000400772 KRT87PA6NCN2 255 aa15.28■□□□□ 0.04
ATG4B-203ENST00000400772 J3QKU1 62 aa15.28■□□□□ 0.04
ATG4B-203ENST00000400772 RASGRF2O14827 1237 aa15.28■□□□□ 0.04
ATG4B-203ENST00000400772 SUV39H1O43463 412 aa15.28■□□□□ 0.04
ATG4B-203ENST00000400772 SLC28A2O43868 658 aa15.28■□□□□ 0.04
ATG4B-203ENST00000400772 PRICKLE3O43900 615 aaPredicted RBP15.28■□□□□ 0.04
ATG4B-203ENST00000400772 ESR1P03372 595 aa15.28■□□□□ 0.04
ATG4B-203ENST00000400772 PAMP19021 973 aa15.28■□□□□ 0.04
ATG4B-203ENST00000400772 CYP2A7P20853 494 aa15.28■□□□□ 0.04
ATG4B-203ENST00000400772 BDKRB1P46663 353 aa15.28■□□□□ 0.04
ATG4B-203ENST00000400772 RPS15P62841 145 aaKnown RBP15.28■□□□□ 0.04
ATG4B-203ENST00000400772 IL10RAQ13651 578 aa15.28■□□□□ 0.04
ATG4B-203ENST00000400772 UGT8Q16880 541 aa15.28■□□□□ 0.04
ATG4B-203ENST00000400772 RNASEH2BQ5TBB1 312 aaKnown RBP15.28■□□□□ 0.04
ATG4B-203ENST00000400772 FAM69BQ5VUD6 431 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms