RNA–Protein interactions for RNA: ENST00000399455.2

USP47-203, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP47, Length 7,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-203ENST00000399455 HLA-DQB2P05538 268 aa7.78□□□□□ -1.16
USP47-203ENST00000399455 IL7RP16871 459 aa7.78□□□□□ -1.16
USP47-203ENST00000399455 PTPN4P29074 926 aa7.78□□□□□ -1.16
USP47-203ENST00000399455 PEX19P40855 299 aa7.78□□□□□ -1.16
USP47-203ENST00000399455 CDKN2BP42772 138 aa7.78□□□□□ -1.16
USP47-203ENST00000399455 CAPZA1P52907 286 aa7.78□□□□□ -1.16
USP47-203ENST00000399455 PLEKHS1Q5SXH7 462 aa7.78□□□□□ -1.16
USP47-203ENST00000399455 SMYD5Q6GMV2 418 aa7.78□□□□□ -1.16
USP47-203ENST00000399455 KIAA0930Q6ICG6 404 aaPredicted RBP7.78□□□□□ -1.16
USP47-203ENST00000399455 STK32CQ86UX6 486 aa7.78□□□□□ -1.16
USP47-203ENST00000399455 SPATA22Q8NHS9 363 aa7.78□□□□□ -1.16
USP47-203ENST00000399455 VANGL1Q8TAA9 524 aaPredicted RBP7.78□□□□□ -1.16
USP47-203ENST00000399455 MAGEE2Q8TD90 523 aaPredicted RBP7.78□□□□□ -1.16
USP47-203ENST00000399455 LRRN4Q8WUT4 740 aa7.78□□□□□ -1.16
USP47-203ENST00000399455 PTCD3Q96EY7 689 aaKnown RBP7.78□□□□□ -1.16
USP47-203ENST00000399455 CASD1Q96PB1 797 aa7.78□□□□□ -1.16
USP47-203ENST00000399455 NAA11Q9BSU3 229 aaPredicted RBP7.78□□□□□ -1.16
USP47-203ENST00000399455 LACRTQ9GZZ8 138 aa7.78□□□□□ -1.16
USP47-203ENST00000399455 ZFR2Q9UPR6 939 aaKnown RBP7.78□□□□□ -1.16
USP47-203ENST00000399455 FSCN2O14926 492 aa7.78□□□□□ -1.16
USP47-203ENST00000399455 CHST10O43529 356 aa7.78□□□□□ -1.16
USP47-203ENST00000399455 PGLSO95336 258 aa7.78□□□□□ -1.16
USP47-203ENST00000399455 ERFP50548 548 aa7.78□□□□□ -1.16
USP47-203ENST00000399455 POLR2JP52435 117 aaKnown RBP7.78□□□□□ -1.16
USP47-203ENST00000399455 RPS15AP62244 130 aaKnown RBP7.78□□□□□ -1.16
USP47-203ENST00000399455 ARG2P78540 354 aa7.78□□□□□ -1.16
USP47-203ENST00000399455 FCHO2Q0JRZ9 810 aa7.78□□□□□ -1.16
USP47-203ENST00000399455 TCTE1Q5JU00 501 aa7.78□□□□□ -1.16
USP47-203ENST00000399455 ABHD17BQ5VST6 288 aa7.78□□□□□ -1.16
USP47-203ENST00000399455 HGSNATQ68CP4 663 aa7.78□□□□□ -1.16
USP47-203ENST00000399455 TMPRSS11AQ6ZMR5 421 aa7.78□□□□□ -1.16
USP47-203ENST00000399455 BHLHE22Q8NFJ8 381 aaPredicted RBP7.78□□□□□ -1.16
USP47-203ENST00000399455 CLEC4CQ8WTT0 213 aa7.78□□□□□ -1.16
USP47-203ENST00000399455 DAZLQ92904 295 aaKnown RBP7.78□□□□□ -1.16
USP47-203ENST00000399455 CYP2S1Q96SQ9 504 aa7.78□□□□□ -1.16
USP47-203ENST00000399455 CMKLR1Q99788 373 aa7.78□□□□□ -1.16
USP47-203ENST00000399455 MUC13Q9H3R2 512 aa7.78□□□□□ -1.16
USP47-203ENST00000399455 EPHA6Q9UF33 1036 aa7.78□□□□□ -1.16
USP47-203ENST00000399455 DNAJA2O60884 412 aa7.78□□□□□ -1.16
USP47-203ENST00000399455 MT-ND5P03915 603 aa7.78□□□□□ -1.16
USP47-203ENST00000399455 IRF2P14316 349 aa7.78□□□□□ -1.16
USP47-203ENST00000399455 CBX5P45973 191 aa7.78□□□□□ -1.16
USP47-203ENST00000399455 ARCN1P48444 511 aaKnown RBP7.78□□□□□ -1.16
USP47-203ENST00000399455 ATP12AP54707 1039 aa7.78□□□□□ -1.16
USP47-203ENST00000399455 PDZK1Q5T2W1 519 aa7.78□□□□□ -1.16
USP47-203ENST00000399455 GTF2IRD2BQ6EKJ0 949 aa7.78□□□□□ -1.16
USP47-203ENST00000399455 FBXO42Q6P3S6 717 aa7.78□□□□□ -1.16
USP47-203ENST00000399455 GTF2IRD2Q86UP8 949 aa7.78□□□□□ -1.16
USP47-203ENST00000399455 TCEAL8Q8IYN2 117 aa7.78□□□□□ -1.16
USP47-203ENST00000399455 KIAA2013Q8IYS2 634 aa7.78□□□□□ -1.16
USP47-203ENST00000399455 TFAP2BQ92481 460 aa7.78□□□□□ -1.16
USP47-203ENST00000399455 MS4A4AQ96JQ5 239 aa7.78□□□□□ -1.16
USP47-203ENST00000399455 SLC29A3Q9BZD2 475 aa7.78□□□□□ -1.16
USP47-203ENST00000399455 COMMD4Q9H0A8 199 aa7.78□□□□□ -1.16
USP47-203ENST00000399455 BAZ2BQ9UIF8 2168 aaKnown RBP7.78□□□□□ -1.16
USP47-203ENST00000399455 K7EPI3 171 aa7.78□□□□□ -1.16
USP47-203ENST00000399455 OR2B3O76000 313 aa7.78□□□□□ -1.16
USP47-203ENST00000399455 BDKRB1P46663 353 aa7.78□□□□□ -1.16
USP47-203ENST00000399455 JAM2P57087 298 aa7.78□□□□□ -1.16
USP47-203ENST00000399455 ABATP80404 500 aa7.78□□□□□ -1.16
USP47-203ENST00000399455 CLCQ05315 142 aa7.78□□□□□ -1.16
USP47-203ENST00000399455 LCP2Q13094 533 aa7.78□□□□□ -1.16
USP47-203ENST00000399455 CARTPTQ16568 116 aa7.78□□□□□ -1.16
USP47-203ENST00000399455 TMEM110Q86TL2 294 aa7.78□□□□□ -1.16
USP47-203ENST00000399455 MRPL43Q8N983 215 aaKnown RBP7.78□□□□□ -1.16
USP47-203ENST00000399455 NETO2Q8NC67 525 aa7.78□□□□□ -1.16
USP47-203ENST00000399455 SLC5A11Q8WWX8 675 aa7.78□□□□□ -1.16
USP47-203ENST00000399455 TFB2MQ9H5Q4 396 aaKnown RBP7.78□□□□□ -1.16
USP47-203ENST00000399455 IL21RQ9HBE5 538 aa7.78□□□□□ -1.16
USP47-203ENST00000399455 APOBEC3GQ9HC16 384 aaKnown RBP7.78□□□□□ -1.16
USP47-203ENST00000399455 MRM3Q9HC36 420 aaKnown RBP7.78□□□□□ -1.16
USP47-203ENST00000399455 HMG20AQ9NP66 347 aa7.78□□□□□ -1.16
USP47-203ENST00000399455 CACNG4Q9UBN1 327 aa7.78□□□□□ -1.16
USP47-203ENST00000399455 HAO1Q9UJM8 370 aa7.78□□□□□ -1.16
USP47-203ENST00000399455 B4GALT2O60909 372 aa7.78□□□□□ -1.16
USP47-203ENST00000399455 CRISP3P54108 245 aa7.78□□□□□ -1.16
USP47-203ENST00000399455 RRADP55042 308 aa7.78□□□□□ -1.16
USP47-203ENST00000399455 SEMA5AQ13591 1074 aa7.78□□□□□ -1.16
USP47-203ENST00000399455 ZNF311Q5JNZ3 666 aa7.78□□□□□ -1.16
USP47-203ENST00000399455 CST9Q5W186 159 aa7.78□□□□□ -1.16
USP47-203ENST00000399455 OR5T3Q8NGG3 340 aa7.78□□□□□ -1.16
USP47-203ENST00000399455 PIWIL2Q8TC59 973 aaKnown RBP7.78□□□□□ -1.16
USP47-203ENST00000399455 SLC38A4Q969I6 547 aa7.78□□□□□ -1.16
USP47-203ENST00000399455 TOP1MTQ969P6 601 aa7.78□□□□□ -1.16
USP47-203ENST00000399455 MOAP1Q96BY2 351 aa7.78□□□□□ -1.16
USP47-203ENST00000399455 MIEF2Q96C03 454 aa7.78□□□□□ -1.16
USP47-203ENST00000399455 TRNT1Q96Q11 434 aaKnown RBP7.78□□□□□ -1.16
USP47-203ENST00000399455 PREBQ9HCU5 417 aa7.78□□□□□ -1.16
USP47-203ENST00000399455 PTGFRNQ9P2B2 879 aa7.78□□□□□ -1.16
USP47-203ENST00000399455 ZNF840PA6NDX5 716 aa7.78□□□□□ -1.16
USP47-203ENST00000399455 PSMD11O00231 422 aa7.78□□□□□ -1.16
USP47-203ENST00000399455 ABCB7O75027 752 aa7.78□□□□□ -1.16
USP47-203ENST00000399455 CLDN7O95471 211 aa7.78□□□□□ -1.16
USP47-203ENST00000399455 CYP17A1P05093 508 aa7.78□□□□□ -1.16
USP47-203ENST00000399455 ACADSP16219 412 aa7.78□□□□□ -1.16
USP47-203ENST00000399455 ZNF37AP17032 561 aaPredicted RBP7.78□□□□□ -1.16
USP47-203ENST00000399455 AHCYP23526 432 aa7.78□□□□□ -1.16
USP47-203ENST00000399455 RPL10P27635 214 aaKnown RBP7.78□□□□□ -1.16
USP47-203ENST00000399455 PSMB9P28065 219 aa7.78□□□□□ -1.16
USP47-203ENST00000399455 TNFRSF8P28908 595 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms