RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 CKAP2Q8WWK9 683 aa6.1□□□□□ -1.43
TRAPPC13-202ENST00000399438 ROBO4Q8WZ75 1007 aa6.1□□□□□ -1.43
TRAPPC13-202ENST00000399438 DLG3Q92796 817 aa6.1□□□□□ -1.43
TRAPPC13-202ENST00000399438 TRIB1Q96RU8 372 aa6.1□□□□□ -1.43
TRAPPC13-202ENST00000399438 PITPNM3Q9BZ71 974 aa6.1□□□□□ -1.43
TRAPPC13-202ENST00000399438 SHCBP1LQ9BZQ2 653 aa6.1□□□□□ -1.43
TRAPPC13-202ENST00000399438 RTN4RQ9BZR6 473 aa6.1□□□□□ -1.43
TRAPPC13-202ENST00000399438 NXF3Q9H4D5 531 aaKnown RBP6.1□□□□□ -1.43
TRAPPC13-202ENST00000399438 TRMT6Q9UJA5 497 aaKnown RBP6.1□□□□□ -1.43
TRAPPC13-202ENST00000399438 HAO1Q9UJM8 370 aa6.1□□□□□ -1.43
TRAPPC13-202ENST00000399438 TSPAN16Q9UKR8 245 aa6.1□□□□□ -1.43
TRAPPC13-202ENST00000399438 NME7Q9Y5B8 376 aa6.1□□□□□ -1.43
TRAPPC13-202ENST00000399438 A0A0A6YYC8 382 aaPredicted RBP6.1□□□□□ -1.43
TRAPPC13-202ENST00000399438 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.1□□□□□ -1.43
TRAPPC13-202ENST00000399438 PYCARD-AS1I3L0S3 204 aa6.1□□□□□ -1.43
TRAPPC13-202ENST00000399438 I3L1I5 382 aaPredicted RBP6.1□□□□□ -1.43
TRAPPC13-202ENST00000399438 CYB561D2O14569 222 aa6.1□□□□□ -1.43
TRAPPC13-202ENST00000399438 TSPAN4O14817 238 aa6.1□□□□□ -1.43
TRAPPC13-202ENST00000399438 KCNN4O15554 427 aa6.1□□□□□ -1.43
TRAPPC13-202ENST00000399438 LRRTM2O43300 516 aa6.1□□□□□ -1.43
TRAPPC13-202ENST00000399438 SNX3O60493 162 aa6.1□□□□□ -1.43
TRAPPC13-202ENST00000399438 USP12O75317 370 aa6.1□□□□□ -1.43
TRAPPC13-202ENST00000399438 RBBP9O75884 186 aa6.1□□□□□ -1.43
TRAPPC13-202ENST00000399438 TJP3O95049 919 aa6.1□□□□□ -1.43
TRAPPC13-202ENST00000399438 LGALS2P05162 132 aa6.1□□□□□ -1.43
TRAPPC13-202ENST00000399438 KRT16P08779 473 aa6.1□□□□□ -1.43
TRAPPC13-202ENST00000399438 ERCC2P18074 760 aa6.1□□□□□ -1.43
TRAPPC13-202ENST00000399438 CALB2P22676 271 aa6.1□□□□□ -1.43
TRAPPC13-202ENST00000399438 LMO2P25791 158 aa6.1□□□□□ -1.43
TRAPPC13-202ENST00000399438 ADORA2AP29274 412 aa6.1□□□□□ -1.43
TRAPPC13-202ENST00000399438 ELK3P41970 407 aa6.1□□□□□ -1.43
TRAPPC13-202ENST00000399438 LEPRP48357 1165 aaKnown RBP6.1□□□□□ -1.43
TRAPPC13-202ENST00000399438 SESN2P58004 480 aaPredicted RBP6.1□□□□□ -1.43
TRAPPC13-202ENST00000399438 GRIK3Q13003 919 aa6.1□□□□□ -1.43
TRAPPC13-202ENST00000399438 SLC13A2Q13183 592 aa6.1□□□□□ -1.43
TRAPPC13-202ENST00000399438 TFDP3Q5H9I0 405 aa6.1□□□□□ -1.43
TRAPPC13-202ENST00000399438 RARS2Q5T160 578 aaKnown RBP6.1□□□□□ -1.43
TRAPPC13-202ENST00000399438 SPRYD7Q5W111 196 aa6.1□□□□□ -1.43
TRAPPC13-202ENST00000399438 KCTD11Q693B1 232 aa6.1□□□□□ -1.43
TRAPPC13-202ENST00000399438 TTC23LQ6PF05 361 aa6.1□□□□□ -1.43
TRAPPC13-202ENST00000399438 ZCCHC23Q6ZST2 131 aa6.1□□□□□ -1.43
TRAPPC13-202ENST00000399438 LRRC6Q86X45 466 aa6.1□□□□□ -1.43
TRAPPC13-202ENST00000399438 FAM131BQ86XD5 332 aa6.1□□□□□ -1.43
TRAPPC13-202ENST00000399438 ECHDC2Q86YB7 292 aa6.1□□□□□ -1.43
TRAPPC13-202ENST00000399438 PHF13Q86YI8 300 aaPredicted RBP6.1□□□□□ -1.43
TRAPPC13-202ENST00000399438 KATNAL2Q8IYT4 538 aa6.1□□□□□ -1.43
TRAPPC13-202ENST00000399438 CAMKVQ8NCB2 501 aa6.1□□□□□ -1.43
TRAPPC13-202ENST00000399438 C17orf47Q8NEP4 570 aa6.1□□□□□ -1.43
TRAPPC13-202ENST00000399438 OR7G3Q8NG95 312 aa6.1□□□□□ -1.43
TRAPPC13-202ENST00000399438 PYROXD1Q8WU10 500 aa6.1□□□□□ -1.43
TRAPPC13-202ENST00000399438 CPT1BQ92523 772 aa6.1□□□□□ -1.43
TRAPPC13-202ENST00000399438 HHIPL1Q96JK4 782 aa6.1□□□□□ -1.43
TRAPPC13-202ENST00000399438 MRGPRX4Q96LA9 322 aa6.1□□□□□ -1.43
TRAPPC13-202ENST00000399438 ANKRD27Q96NW4 1050 aa6.1□□□□□ -1.43
TRAPPC13-202ENST00000399438 WNT10AQ9GZT5 417 aa6.1□□□□□ -1.43
TRAPPC13-202ENST00000399438 NELFAQ9H3P2 528 aa6.1□□□□□ -1.43
TRAPPC13-202ENST00000399438 SENP1Q9P0U3 644 aa6.1□□□□□ -1.43
TRAPPC13-202ENST00000399438 ARMCX1Q9P291 453 aa6.1□□□□□ -1.43
TRAPPC13-202ENST00000399438 FBXL7Q9UJT9 491 aa6.1□□□□□ -1.43
TRAPPC13-202ENST00000399438 SOX13Q9UN79 622 aa6.1□□□□□ -1.43
TRAPPC13-202ENST00000399438 SLC22A14Q9Y267 594 aa6.1□□□□□ -1.43
TRAPPC13-202ENST00000399438 SNX10Q9Y5X0 201 aa6.1□□□□□ -1.43
TRAPPC13-202ENST00000399438 USP34Q70CQ2 3546 aa6.1□□□□□ -1.43
TRAPPC13-202ENST00000399438 NFASCO94856 1347 aa6.09□□□□□ -1.43
TRAPPC13-202ENST00000399438 A0A075B6Q4 140 aa6.09□□□□□ -1.43
TRAPPC13-202ENST00000399438 CXorf49A8MYA2 514 aaPredicted RBP6.09□□□□□ -1.43
TRAPPC13-202ENST00000399438 KDM4EB2RXH2 506 aaPredicted RBP6.09□□□□□ -1.43
TRAPPC13-202ENST00000399438 TMEM233B4DJY2 109 aa6.09□□□□□ -1.43
TRAPPC13-202ENST00000399438 I3L4J1 428 aa6.09□□□□□ -1.43
TRAPPC13-202ENST00000399438 LGALS8O00214 317 aa6.09□□□□□ -1.43
TRAPPC13-202ENST00000399438 DYNC1LI2O43237 492 aaPredicted RBP6.09□□□□□ -1.43
TRAPPC13-202ENST00000399438 ADAM11O75078 769 aa6.09□□□□□ -1.43
TRAPPC13-202ENST00000399438 ATP6V1G1O75348 118 aa6.09□□□□□ -1.43
TRAPPC13-202ENST00000399438 ATP5HO75947 161 aa6.09□□□□□ -1.43
TRAPPC13-202ENST00000399438 TUBG1P23258 451 aa6.09□□□□□ -1.43
TRAPPC13-202ENST00000399438 RBL1P28749 1068 aa6.09□□□□□ -1.43
TRAPPC13-202ENST00000399438 KLF10Q13118 480 aa6.09□□□□□ -1.43
TRAPPC13-202ENST00000399438 KRT81Q14533 505 aa6.09□□□□□ -1.43
TRAPPC13-202ENST00000399438 CASC4Q6P4E1 433 aa6.09□□□□□ -1.43
TRAPPC13-202ENST00000399438 XYLT1Q86Y38 959 aa6.09□□□□□ -1.43
TRAPPC13-202ENST00000399438 PHYKPLQ8IUZ5 450 aa6.09□□□□□ -1.43
TRAPPC13-202ENST00000399438 MRPL41Q8IXM3 137 aaKnown RBP6.09□□□□□ -1.43
TRAPPC13-202ENST00000399438 ALLCQ8N6M5 410 aa6.09□□□□□ -1.43
TRAPPC13-202ENST00000399438 EXD1Q8NHP7 514 aa6.09□□□□□ -1.43
TRAPPC13-202ENST00000399438 KLHL29Q96CT2 875 aa6.09□□□□□ -1.43
TRAPPC13-202ENST00000399438 TMEM68Q96MH6 324 aa6.09□□□□□ -1.43
TRAPPC13-202ENST00000399438 CCT7Q99832 543 aa6.09□□□□□ -1.43
TRAPPC13-202ENST00000399438 APOL2Q9BQE5 337 aa6.09□□□□□ -1.43
TRAPPC13-202ENST00000399438 SRSF8Q9BRL6 282 aaKnown RBP6.09□□□□□ -1.43
TRAPPC13-202ENST00000399438 TIPINQ9BVW5 301 aa6.09□□□□□ -1.43
TRAPPC13-202ENST00000399438 KLC2Q9H0B6 622 aa6.09□□□□□ -1.43
TRAPPC13-202ENST00000399438 CRISPLD1Q9H336 500 aa6.09□□□□□ -1.43
TRAPPC13-202ENST00000399438 RAD21L1Q9H4I0 556 aa6.09□□□□□ -1.43
TRAPPC13-202ENST00000399438 FBXO6Q9NRD1 293 aaPredicted RBP6.09□□□□□ -1.43
TRAPPC13-202ENST00000399438 TUBG2Q9NRH3 451 aa6.09□□□□□ -1.43
TRAPPC13-202ENST00000399438 FARSBQ9NSD9 589 aaKnown RBP6.09□□□□□ -1.43
TRAPPC13-202ENST00000399438 ETNK2Q9NVF9 386 aa6.09□□□□□ -1.43
TRAPPC13-202ENST00000399438 PKD2L2Q9NZM6 624 aa6.09□□□□□ -1.43
TRAPPC13-202ENST00000399438 FBXW2Q9UKT8 454 aa6.09□□□□□ -1.43
TRAPPC13-202ENST00000399438 USP18Q9UMW8 372 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms