RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 PPCSQ9HAB8 311 aa12.04□□□□□ -0.48
HLA-DQB1-203ENST00000399082 RDH14Q9HBH5 336 aa12.04□□□□□ -0.48
HLA-DQB1-203ENST00000399082 ZNF358Q9NW07 568 aa12.04□□□□□ -0.48
HLA-DQB1-203ENST00000399082 SPHK1Q9NYA1 384 aa12.04□□□□□ -0.48
HLA-DQB1-203ENST00000399082 POLG2Q9UHN1 485 aa12.04□□□□□ -0.48
HLA-DQB1-203ENST00000399082 LGALS13Q9UHV8 139 aa12.04□□□□□ -0.48
HLA-DQB1-203ENST00000399082 APOBEC2Q9Y235 224 aaKnown RBP12.04□□□□□ -0.48
HLA-DQB1-203ENST00000399082 IKBKGQ9Y6K9 419 aa12.04□□□□□ -0.48
HLA-DQB1-203ENST00000399082 MN1Q10571 1320 aaPredicted RBP12.04□□□□□ -0.48
HLA-DQB1-203ENST00000399082 ANKRD12Q6UB98 2062 aa12.04□□□□□ -0.48
HLA-DQB1-203ENST00000399082 SNRNP200O75643 2136 aaKnown RBP12.04□□□□□ -0.48
HLA-DQB1-203ENST00000399082 SPTBN2O15020 2390 aa12.03□□□□□ -0.48
HLA-DQB1-203ENST00000399082 OR6C74A6NCV1 312 aa12.03□□□□□ -0.48
HLA-DQB1-203ENST00000399082 OR5K3A6NET4 321 aa12.03□□□□□ -0.48
HLA-DQB1-203ENST00000399082 D6RAR5 112 aa12.03□□□□□ -0.48
HLA-DQB1-203ENST00000399082 RASGRF2O14827 1237 aa12.03□□□□□ -0.48
HLA-DQB1-203ENST00000399082 SLC16A5O15375 505 aa12.03□□□□□ -0.48
HLA-DQB1-203ENST00000399082 CDH16O75309 829 aa12.03□□□□□ -0.48
HLA-DQB1-203ENST00000399082 KRT37O76014 449 aa12.03□□□□□ -0.48
HLA-DQB1-203ENST00000399082 CATP04040 527 aaKnown RBP12.03□□□□□ -0.48
HLA-DQB1-203ENST00000399082 C8GP07360 202 aa12.03□□□□□ -0.48
HLA-DQB1-203ENST00000399082 TYK2P29597 1187 aa12.03□□□□□ -0.48
HLA-DQB1-203ENST00000399082 SLC26A3P40879 764 aa12.03□□□□□ -0.48
HLA-DQB1-203ENST00000399082 CCNFP41002 786 aa12.03□□□□□ -0.48
HLA-DQB1-203ENST00000399082 FASTKQ14296 549 aaKnown RBP12.03□□□□□ -0.48
HLA-DQB1-203ENST00000399082 PLCL1Q15111 1095 aa12.03□□□□□ -0.48
HLA-DQB1-203ENST00000399082 OR4D1Q15615 310 aa12.03□□□□□ -0.48
HLA-DQB1-203ENST00000399082 N4BP2L1Q5TBK1 243 aaPredicted RBP12.03□□□□□ -0.48
HLA-DQB1-203ENST00000399082 FBXO38Q6PIJ6 1188 aa12.03□□□□□ -0.48
HLA-DQB1-203ENST00000399082 RAPH1Q70E73 1250 aa12.03□□□□□ -0.48
HLA-DQB1-203ENST00000399082 USP53Q70EK8 1073 aa12.03□□□□□ -0.48
HLA-DQB1-203ENST00000399082 TAOK1Q7L7X3 1001 aa12.03□□□□□ -0.48
HLA-DQB1-203ENST00000399082 RAB44Q7Z6P3 723 aaPredicted RBP12.03□□□□□ -0.48
HLA-DQB1-203ENST00000399082 AMIGO1Q86WK6 493 aa12.03□□□□□ -0.48
HLA-DQB1-203ENST00000399082 MARCH9Q86YJ5 346 aa12.03□□□□□ -0.48
HLA-DQB1-203ENST00000399082 SLITRK4Q8IW52 837 aa12.03□□□□□ -0.48
HLA-DQB1-203ENST00000399082 LRRC56Q8IYG6 542 aaPredicted RBP12.03□□□□□ -0.48
HLA-DQB1-203ENST00000399082 OR9A1PQ8NGU1 263 aa12.03□□□□□ -0.48
HLA-DQB1-203ENST00000399082 OR10G6Q8NH81 332 aa12.03□□□□□ -0.48
HLA-DQB1-203ENST00000399082 LCN9Q8WX39 176 aa12.03□□□□□ -0.48
HLA-DQB1-203ENST00000399082 ANKRD7Q92527 254 aa12.03□□□□□ -0.48
HLA-DQB1-203ENST00000399082 RAD51AP1Q96B01 352 aa12.03□□□□□ -0.48
HLA-DQB1-203ENST00000399082 NXNL1Q96CM4 212 aa12.03□□□□□ -0.48
HLA-DQB1-203ENST00000399082 MTBPQ96DY7 904 aa12.03□□□□□ -0.48
HLA-DQB1-203ENST00000399082 PPM1MQ96MI6 270 aa12.03□□□□□ -0.48
HLA-DQB1-203ENST00000399082 FOPNLQ96NB1 174 aa12.03□□□□□ -0.48
HLA-DQB1-203ENST00000399082 VPS11Q9H270 941 aa12.03□□□□□ -0.48
HLA-DQB1-203ENST00000399082 SYNDIG1Q9H7V2 258 aa12.03□□□□□ -0.48
HLA-DQB1-203ENST00000399082 WASF3Q9UPY6 502 aa12.03□□□□□ -0.48
HLA-DQB1-203ENST00000399082 ACOT9Q9Y305 439 aa12.03□□□□□ -0.48
HLA-DQB1-203ENST00000399082 A0A087X1B8 175 aa12.02□□□□□ -0.49
HLA-DQB1-203ENST00000399082 A0A1W2PPV9 198 aa12.02□□□□□ -0.49
HLA-DQB1-203ENST00000399082 FAM221BA6H8Z2 402 aa12.02□□□□□ -0.49
HLA-DQB1-203ENST00000399082 SNPHO15079 494 aa12.02□□□□□ -0.49
HLA-DQB1-203ENST00000399082 DUX1O43812 170 aa12.02□□□□□ -0.49
HLA-DQB1-203ENST00000399082 KIF1CO43896 1103 aaKnown RBP12.02□□□□□ -0.49
HLA-DQB1-203ENST00000399082 PRICKLE3O43900 615 aaPredicted RBP12.02□□□□□ -0.49
HLA-DQB1-203ENST00000399082 ERLIN1O75477 346 aa12.02□□□□□ -0.49
HLA-DQB1-203ENST00000399082 CPNE6O95741 557 aa12.02□□□□□ -0.49
HLA-DQB1-203ENST00000399082 SLC16A8O95907 504 aa12.02□□□□□ -0.49
HLA-DQB1-203ENST00000399082 C9P02748 559 aa12.02□□□□□ -0.49
HLA-DQB1-203ENST00000399082 RPN2P04844 631 aa12.02□□□□□ -0.49
HLA-DQB1-203ENST00000399082 CHRM5P08912 532 aaPredicted RBP12.02□□□□□ -0.49
HLA-DQB1-203ENST00000399082 LTA4HP09960 611 aaKnown RBP12.02□□□□□ -0.49
HLA-DQB1-203ENST00000399082 POLR2CP19387 275 aaPredicted RBP12.02□□□□□ -0.49
HLA-DQB1-203ENST00000399082 TFEBP19484 476 aa12.02□□□□□ -0.49
HLA-DQB1-203ENST00000399082 MPSTP25325 297 aa12.02□□□□□ -0.49
HLA-DQB1-203ENST00000399082 IMPA1P29218 277 aa12.02□□□□□ -0.49
HLA-DQB1-203ENST00000399082 SHMT2P34897 504 aa12.02□□□□□ -0.49
HLA-DQB1-203ENST00000399082 LSSP48449 732 aa12.02□□□□□ -0.49
HLA-DQB1-203ENST00000399082 RAB28P51157 221 aa12.02□□□□□ -0.49
HLA-DQB1-203ENST00000399082 KPNA2P52292 529 aaKnown RBP12.02□□□□□ -0.49
HLA-DQB1-203ENST00000399082 E2F1Q01094 437 aa12.02□□□□□ -0.49
HLA-DQB1-203ENST00000399082 ZFP36L1Q07352 338 aaKnown RBP12.02□□□□□ -0.49
HLA-DQB1-203ENST00000399082 CYP2A13Q16696 494 aa12.02□□□□□ -0.49
HLA-DQB1-203ENST00000399082 HES3Q5TGS1 186 aa12.02□□□□□ -0.49
HLA-DQB1-203ENST00000399082 WDR74Q6RFH5 385 aaPredicted RBP12.02□□□□□ -0.49
HLA-DQB1-203ENST00000399082 ISCA2Q86U28 154 aa12.02□□□□□ -0.49
HLA-DQB1-203ENST00000399082 C2orf73Q8N5S3 287 aaPredicted RBP12.02□□□□□ -0.49
HLA-DQB1-203ENST00000399082 OR2L8Q8NGY9 312 aa12.02□□□□□ -0.49
HLA-DQB1-203ENST00000399082 ZNF480Q8WV37 535 aa12.02□□□□□ -0.49
HLA-DQB1-203ENST00000399082 NCSTNQ92542 709 aa12.02□□□□□ -0.49
HLA-DQB1-203ENST00000399082 MARVELD3Q96A59 401 aa12.02□□□□□ -0.49
HLA-DQB1-203ENST00000399082 KIAA1191Q96A73 305 aa12.02□□□□□ -0.49
HLA-DQB1-203ENST00000399082 ZBTB9Q96C00 473 aa12.02□□□□□ -0.49
HLA-DQB1-203ENST00000399082 GFM1Q96RP9 751 aaKnown RBP12.02□□□□□ -0.49
HLA-DQB1-203ENST00000399082 ATOH8Q96SQ7 321 aa12.02□□□□□ -0.49
HLA-DQB1-203ENST00000399082 ROPN1BQ9BZX4 212 aaPredicted RBP12.02□□□□□ -0.49
HLA-DQB1-203ENST00000399082 RAB33BQ9H082 229 aa12.02□□□□□ -0.49
HLA-DQB1-203ENST00000399082 ABCG4Q9H172 646 aa12.02□□□□□ -0.49
HLA-DQB1-203ENST00000399082 SEMA6CQ9H3T2 930 aa12.02□□□□□ -0.49
HLA-DQB1-203ENST00000399082 SRMSQ9H3Y6 488 aa12.02□□□□□ -0.49
HLA-DQB1-203ENST00000399082 EPB41L1Q9H4G0 881 aa12.02□□□□□ -0.49
HLA-DQB1-203ENST00000399082 ROPN1Q9HAT0 212 aaPredicted RBP12.02□□□□□ -0.49
HLA-DQB1-203ENST00000399082 PARVBQ9HBI1 364 aa12.02□□□□□ -0.49
HLA-DQB1-203ENST00000399082 PCMTD2Q9NV79 361 aa12.02□□□□□ -0.49
HLA-DQB1-203ENST00000399082 SPATA7Q9P0W8 599 aa12.02□□□□□ -0.49
HLA-DQB1-203ENST00000399082 PDP2Q9P2J9 529 aa12.02□□□□□ -0.49
HLA-DQB1-203ENST00000399082 EPHA6Q9UF33 1036 aa12.02□□□□□ -0.49
HLA-DQB1-203ENST00000399082 NOVA2Q9UNW9 492 aaKnown RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms