RNA–Protein interactions for RNA: ENST00000399017.6

TTC3-204, Transcript of tetratricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC3, Length 10,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-204ENST00000399017 NUS1Q96E22 293 aa4.93□□□□□ -1.62
TTC3-204ENST00000399017 SLC39A3Q9BRY0 314 aa4.93□□□□□ -1.62
TTC3-204ENST00000399017 NSUN3Q9H649 340 aaKnown RBP4.93□□□□□ -1.62
TTC3-204ENST00000399017 PCDH12Q9NPG4 1184 aa4.93□□□□□ -1.62
TTC3-204ENST00000399017 EMC3Q9P0I2 261 aa4.93□□□□□ -1.62
TTC3-204ENST00000399017 IGSF9Q9P2J2 1179 aa4.93□□□□□ -1.62
TTC3-204ENST00000399017 ABCD2Q9UBJ2 740 aa4.93□□□□□ -1.62
TTC3-204ENST00000399017 TOPAZ1Q8N9V7 1692 aa4.93□□□□□ -1.62
TTC3-204ENST00000399017 REREQ9P2R6 1566 aa4.93□□□□□ -1.62
TTC3-204ENST00000399017 DISP2A7MBM2 1401 aa4.93□□□□□ -1.62
TTC3-204ENST00000399017 PITPNM1O00562 1244 aa4.93□□□□□ -1.62
TTC3-204ENST00000399017 KDM4BO94953 1096 aa4.93□□□□□ -1.62
TTC3-204ENST00000399017 PRH1P02810 166 aa4.93□□□□□ -1.62
TTC3-204ENST00000399017 PRKAR1AP10644 381 aa4.93□□□□□ -1.62
TTC3-204ENST00000399017 ELNP15502 786 aa4.93□□□□□ -1.62
TTC3-204ENST00000399017 GOT1P17174 413 aa4.93□□□□□ -1.62
TTC3-204ENST00000399017 IRX1P78414 480 aaPredicted RBP4.93□□□□□ -1.62
TTC3-204ENST00000399017 FUT2Q10981 343 aa4.93□□□□□ -1.62
TTC3-204ENST00000399017 NFE2L1Q14494 772 aa4.93□□□□□ -1.62
TTC3-204ENST00000399017 TRIM16LQ309B1 348 aa4.93□□□□□ -1.62
TTC3-204ENST00000399017 SATL1Q86VE3 508 aa4.93□□□□□ -1.62
TTC3-204ENST00000399017 VSTM4Q8IW00 320 aa4.93□□□□□ -1.62
TTC3-204ENST00000399017 SLC43A3Q8NBI5 491 aa4.93□□□□□ -1.62
TTC3-204ENST00000399017 CHST4Q8NCG5 386 aa4.93□□□□□ -1.62
TTC3-204ENST00000399017 PXYLP1Q8TE99 480 aa4.93□□□□□ -1.62
TTC3-204ENST00000399017 FAM136AQ96C01 138 aa4.93□□□□□ -1.62
TTC3-204ENST00000399017 C3P01024 1663 aa4.93□□□□□ -1.62
TTC3-204ENST00000399017 FAM25EA8MYX2 175 aa4.93□□□□□ -1.62
TTC3-204ENST00000399017 E7ENX8 843 aa4.93□□□□□ -1.62
TTC3-204ENST00000399017 KCNQ3O43525 872 aa4.93□□□□□ -1.62
TTC3-204ENST00000399017 NUDT17P0C025 328 aa4.93□□□□□ -1.62
TTC3-204ENST00000399017 PSMA1P25786 263 aaKnown RBP4.93□□□□□ -1.62
TTC3-204ENST00000399017 PREPP48147 710 aa4.93□□□□□ -1.62
TTC3-204ENST00000399017 GSTM4Q03013 218 aa4.93□□□□□ -1.62
TTC3-204ENST00000399017 TAP2Q03519 686 aa4.93□□□□□ -1.62
TTC3-204ENST00000399017 FASTKQ14296 549 aaKnown RBP4.93□□□□□ -1.62
TTC3-204ENST00000399017 SPRYD7Q5W111 196 aa4.93□□□□□ -1.62
TTC3-204ENST00000399017 DNAJC14Q6Y2X3 702 aaPredicted RBP4.93□□□□□ -1.62
TTC3-204ENST00000399017 ZNF610Q8N9Z0 462 aa4.93□□□□□ -1.62
TTC3-204ENST00000399017 OR6N1Q8NGY5 312 aa4.93□□□□□ -1.62
TTC3-204ENST00000399017 LINGO1Q96FE5 620 aa4.93□□□□□ -1.62
TTC3-204ENST00000399017 CAMK1GQ96NX5 476 aa4.93□□□□□ -1.62
TTC3-204ENST00000399017 P2RX7Q99572 595 aaKnown RBP4.93□□□□□ -1.62
TTC3-204ENST00000399017 SIT1Q9Y3P8 196 aa4.93□□□□□ -1.62
TTC3-204ENST00000399017 ACACAQ13085 2346 aa4.93□□□□□ -1.62
TTC3-204ENST00000399017 VSTM2BA6NLU5 285 aa4.93□□□□□ -1.62
TTC3-204ENST00000399017 GABRR3A8MPY1 467 aa4.93□□□□□ -1.62
TTC3-204ENST00000399017 NMT2O60551 498 aa4.93□□□□□ -1.62
TTC3-204ENST00000399017 MAPK3P27361 379 aaPredicted RBP4.93□□□□□ -1.62
TTC3-204ENST00000399017 MAP3K8P41279 467 aa4.93□□□□□ -1.62
TTC3-204ENST00000399017 LGALS4P56470 323 aa4.93□□□□□ -1.62
TTC3-204ENST00000399017 RIPPLY1Q0D2K3 151 aa4.93□□□□□ -1.62
TTC3-204ENST00000399017 NR1I3Q14994 352 aa4.93□□□□□ -1.62
TTC3-204ENST00000399017 RASGEF1CQ8N431 466 aa4.93□□□□□ -1.62
TTC3-204ENST00000399017 TC2NQ8N9U0 490 aa4.93□□□□□ -1.62
TTC3-204ENST00000399017 ANKRD52Q8NB46 1076 aa4.93□□□□□ -1.62
TTC3-204ENST00000399017 DDHD1Q8NEL9 900 aa4.93□□□□□ -1.62
TTC3-204ENST00000399017 RGMAQ96B86 450 aa4.93□□□□□ -1.62
TTC3-204ENST00000399017 SH2D3AQ9BRG2 576 aa4.93□□□□□ -1.62
TTC3-204ENST00000399017 TRMOQ9BU70 441 aa4.93□□□□□ -1.62
TTC3-204ENST00000399017 CCDC167Q9P0B6 97 aa4.93□□□□□ -1.62
TTC3-204ENST00000399017 ABRACLQ9P1F3 81 aa4.93□□□□□ -1.62
TTC3-204ENST00000399017 HS3ST4Q9Y661 456 aa4.93□□□□□ -1.62
TTC3-204ENST00000399017 DISP1Q96F81 1524 aa4.93□□□□□ -1.62
TTC3-204ENST00000399017 ATRNO75882 1429 aa4.93□□□□□ -1.62
TTC3-204ENST00000399017 INPPL1O15357 1258 aa4.93□□□□□ -1.62
TTC3-204ENST00000399017 TRUB2O95900 331 aaKnown RBP4.93□□□□□ -1.62
TTC3-204ENST00000399017 ZNF37AP17032 561 aaPredicted RBP4.93□□□□□ -1.62
TTC3-204ENST00000399017 ITGB5P18084 799 aa4.93□□□□□ -1.62
TTC3-204ENST00000399017 U2AF2P26368 475 aaKnown RBP eCLIP4.93□□□□□ -1.627e-7■■■□□ 15.2
TTC3-204ENST00000399017 SP140Q13342 867 aa4.93□□□□□ -1.62
TTC3-204ENST00000399017 ARFRP1Q13795 201 aa4.93□□□□□ -1.62
TTC3-204ENST00000399017 PUM1Q14671 1186 aaKnown RBP eCLIP4.93□□□□□ -1.624e-10■■□□□ 13.1
TTC3-204ENST00000399017 DGUOKQ16854 277 aa4.93□□□□□ -1.62
TTC3-204ENST00000399017 PLEKHN1Q494U1 663 aaPredicted RBP4.93□□□□□ -1.62
TTC3-204ENST00000399017 SPIN3Q5JUX0 258 aa4.93□□□□□ -1.62
TTC3-204ENST00000399017 MBLAC2Q68D91 279 aa4.93□□□□□ -1.62
TTC3-204ENST00000399017 ERICH5Q6P6B1 374 aa4.93□□□□□ -1.62
TTC3-204ENST00000399017 ARMC10Q8N2F6 343 aa4.93□□□□□ -1.62
TTC3-204ENST00000399017 GALNT15Q8N3T1 639 aa4.93□□□□□ -1.62
TTC3-204ENST00000399017 SLC5A8Q8N695 610 aa4.93□□□□□ -1.62
TTC3-204ENST00000399017 SPATA4Q8NEY3 305 aa4.93□□□□□ -1.62
TTC3-204ENST00000399017 SLC5A11Q8WWX8 675 aa4.93□□□□□ -1.62
TTC3-204ENST00000399017 CNOT9Q92600 299 aaKnown RBP4.93□□□□□ -1.62
TTC3-204ENST00000399017 LGR4Q9BXB1 951 aa4.93□□□□□ -1.62
TTC3-204ENST00000399017 MTMR10Q9NXD2 777 aa4.93□□□□□ -1.62
TTC3-204ENST00000399017 KCNIP1Q9NZI2 227 aa4.93□□□□□ -1.62
TTC3-204ENST00000399017 RARRES3Q9UL19 164 aa4.93□□□□□ -1.62
TTC3-204ENST00000399017 CA14Q9ULX7 337 aa4.93□□□□□ -1.62
TTC3-204ENST00000399017 ING4Q9UNL4 249 aa4.93□□□□□ -1.62
TTC3-204ENST00000399017 STXBP5LQ9Y2K9 1186 aa4.93□□□□□ -1.62
TTC3-204ENST00000399017 DLC1Q96QB1 1528 aa4.92□□□□□ -1.62
TTC3-204ENST00000399017 GLYATL1P3A0A0U1RQE8 302 aa4.92□□□□□ -1.62
TTC3-204ENST00000399017 SH3D21A4FU49 640 aa4.92□□□□□ -1.62
TTC3-204ENST00000399017 FOXE1O00358 373 aaPredicted RBP4.92□□□□□ -1.62
TTC3-204ENST00000399017 PLK4O00444 970 aa4.92□□□□□ -1.62
TTC3-204ENST00000399017 PDPK1O15530 556 aa4.92□□□□□ -1.62
TTC3-204ENST00000399017 LDLRP01130 860 aa4.92□□□□□ -1.62
TTC3-204ENST00000399017 GP1BBP13224 206 aa4.92□□□□□ -1.62
TTC3-204ENST00000399017 HRH2P25021 359 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms