RNA–Protein interactions for RNA: ENST00000398652.7

FAM3B-204, Transcript of family with sequence similarity 3 member B, humanhuman

TSL 1 (best) BASIC

Gene FAM3B, Length 1,125 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3B-204ENST00000398652 CEP41Q9BYV8 373 aa13.22□□□□□ -0.29
FAM3B-204ENST00000398652 SLC25A51Q9H1U9 297 aa13.22□□□□□ -0.29
FAM3B-204ENST00000398652 XKR8Q9H6D3 395 aa13.22□□□□□ -0.29
FAM3B-204ENST00000398652 SOX17Q9H6I2 414 aaPredicted RBP13.22□□□□□ -0.29
FAM3B-204ENST00000398652 IL17CQ9P0M4 197 aa13.22□□□□□ -0.29
FAM3B-204ENST00000398652 PTGFRNQ9P2B2 879 aa13.22□□□□□ -0.29
FAM3B-204ENST00000398652 PLCL2Q9UPR0 1127 aa13.22□□□□□ -0.29
FAM3B-204ENST00000398652 ZNF835Q9Y2P0 537 aa13.22□□□□□ -0.29
FAM3B-204ENST00000398652 MRPS2Q9Y399 296 aaKnown RBP13.22□□□□□ -0.29
FAM3B-204ENST00000398652 NSD1Q96L73 2696 aaPredicted RBP13.22□□□□□ -0.29
FAM3B-204ENST00000398652 GAPDHSO14556 408 aaPredicted RBP13.21□□□□□ -0.29
FAM3B-204ENST00000398652 ACPPP15309 386 aa13.21□□□□□ -0.29
FAM3B-204ENST00000398652 FDXRP22570 491 aa13.21□□□□□ -0.29
FAM3B-204ENST00000398652 IST1P53990 364 aa13.21□□□□□ -0.29
FAM3B-204ENST00000398652 ARSFP54793 590 aa13.21□□□□□ -0.29
FAM3B-204ENST00000398652 Q6ZPB1 254 aaPredicted RBP13.21□□□□□ -0.29
FAM3B-204ENST00000398652 TTLL10Q6ZVT0 673 aa13.21□□□□□ -0.29
FAM3B-204ENST00000398652 DNAJC22Q8N4W6 341 aa13.21□□□□□ -0.29
FAM3B-204ENST00000398652 BRIX1Q8TDN6 353 aaKnown RBP13.21□□□□□ -0.29
FAM3B-204ENST00000398652 ZNF830Q96NB3 372 aaPredicted RBP13.21□□□□□ -0.29
FAM3B-204ENST00000398652 OR2A14Q96R47 310 aa13.21□□□□□ -0.29
FAM3B-204ENST00000398652 TMEM121Q9BTD3 319 aa13.21□□□□□ -0.29
FAM3B-204ENST00000398652 HGH1Q9BTY7 390 aa13.21□□□□□ -0.29
FAM3B-204ENST00000398652 GSX1Q9H4S2 264 aaPredicted RBP13.21□□□□□ -0.29
FAM3B-204ENST00000398652 MVB12BQ9H7P6 319 aa13.21□□□□□ -0.29
FAM3B-204ENST00000398652 CTSFQ9UBX1 484 aa13.21□□□□□ -0.29
FAM3B-204ENST00000398652 A0A0J9YY10 115 aa13.2□□□□□ -0.3
FAM3B-204ENST00000398652 IFRD1O00458 451 aaPredicted RBP13.2□□□□□ -0.3
FAM3B-204ENST00000398652 MAP2K7O14733 419 aa13.2□□□□□ -0.3
FAM3B-204ENST00000398652 SGTAO43765 313 aa13.2□□□□□ -0.3
FAM3B-204ENST00000398652 F10P00742 488 aa13.2□□□□□ -0.3
FAM3B-204ENST00000398652 CACNG1Q06432 222 aa13.2□□□□□ -0.3
FAM3B-204ENST00000398652 CT47A1Q5JQC4 288 aaPredicted RBP13.2□□□□□ -0.3
FAM3B-204ENST00000398652 FAM182AQ5T1J6 154 aa13.2□□□□□ -0.3
FAM3B-204ENST00000398652 PQLC3Q8N755 202 aa13.2□□□□□ -0.3
FAM3B-204ENST00000398652 PHC3Q8NDX5 983 aa13.2□□□□□ -0.3
FAM3B-204ENST00000398652 SPATA22Q8NHS9 363 aa13.2□□□□□ -0.3
FAM3B-204ENST00000398652 SUN3Q8TAQ9 357 aa13.2□□□□□ -0.3
FAM3B-204ENST00000398652 THAP3Q8WTV1 239 aaPredicted RBP13.2□□□□□ -0.3
FAM3B-204ENST00000398652 PHF10Q8WUB8 498 aaKnown RBP13.2□□□□□ -0.3
FAM3B-204ENST00000398652 NANOS1Q8WY41 292 aaKnown RBP13.2□□□□□ -0.3
FAM3B-204ENST00000398652 WNT2BQ93097 391 aa13.2□□□□□ -0.3
FAM3B-204ENST00000398652 FAF2Q96CS3 445 aa13.2□□□□□ -0.3
FAM3B-204ENST00000398652 MESP1Q9BRJ9 268 aa13.2□□□□□ -0.3
FAM3B-204ENST00000398652 CRB3Q9BUF7 120 aa13.2□□□□□ -0.3
FAM3B-204ENST00000398652 RNF32Q9H0A6 362 aa13.2□□□□□ -0.3
FAM3B-204ENST00000398652 OR52A5Q9H2C5 316 aa13.2□□□□□ -0.3
FAM3B-204ENST00000398652 EURLQ9NYK6 297 aa13.2□□□□□ -0.3
FAM3B-204ENST00000398652 HACD3Q9P035 362 aa13.2□□□□□ -0.3
FAM3B-204ENST00000398652 IP6K2Q9UHH9 426 aa13.2□□□□□ -0.3
FAM3B-204ENST00000398652 ICKQ9UPZ9 632 aa13.2□□□□□ -0.3
FAM3B-204ENST00000398652 VSTM2BA6NLU5 285 aa13.19□□□□□ -0.3
FAM3B-204ENST00000398652 LGALS16A8MUM7 142 aa13.19□□□□□ -0.3
FAM3B-204ENST00000398652 DSCR3O14972 297 aa13.19□□□□□ -0.3
FAM3B-204ENST00000398652 PRAMEF2O60811 474 aa13.19□□□□□ -0.3
FAM3B-204ENST00000398652 WISP2O76076 250 aa13.19□□□□□ -0.3
FAM3B-204ENST00000398652 PRAMEF1O95521 474 aa13.19□□□□□ -0.3
FAM3B-204ENST00000398652 SERPINA7P05543 415 aa13.19□□□□□ -0.3
FAM3B-204ENST00000398652 PRR35P0CG20 571 aa13.19□□□□□ -0.3
FAM3B-204ENST00000398652 MYBL2P10244 700 aa13.19□□□□□ -0.3
FAM3B-204ENST00000398652 FOSL1P15407 271 aa13.19□□□□□ -0.3
FAM3B-204ENST00000398652 IGFBP2P18065 325 aa13.19□□□□□ -0.3
FAM3B-204ENST00000398652 SHMT2P34897 504 aa13.19□□□□□ -0.3
FAM3B-204ENST00000398652 SSR1P43307 286 aaKnown RBP13.19□□□□□ -0.3
FAM3B-204ENST00000398652 CD151P48509 253 aa13.19□□□□□ -0.3
FAM3B-204ENST00000398652 CARSP49589 748 aaKnown RBP13.19□□□□□ -0.3
FAM3B-204ENST00000398652 PRLHRP49683 370 aa13.19□□□□□ -0.3
FAM3B-204ENST00000398652 FANCCQ00597 558 aa13.19□□□□□ -0.3
FAM3B-204ENST00000398652 PMP22Q01453 160 aa13.19□□□□□ -0.3
FAM3B-204ENST00000398652 PRKG2Q13237 762 aa13.19□□□□□ -0.3
FAM3B-204ENST00000398652 BOP1Q14137 746 aaKnown RBP13.19□□□□□ -0.3
FAM3B-204ENST00000398652 NOMO1Q15155 1222 aa13.19□□□□□ -0.3
FAM3B-204ENST00000398652 HADHQ16836 314 aaKnown RBP13.19□□□□□ -0.3
FAM3B-204ENST00000398652 NCCRP1Q6ZVX7 275 aaPredicted RBP13.19□□□□□ -0.3
FAM3B-204ENST00000398652 GLT6D1Q7Z4J2 308 aa13.19□□□□□ -0.3
FAM3B-204ENST00000398652 TMEM200AQ86VY9 491 aa13.19□□□□□ -0.3
FAM3B-204ENST00000398652 SPPL2CQ8IUH8 684 aa13.19□□□□□ -0.3
FAM3B-204ENST00000398652 SIRT6Q8N6T7 355 aa13.19□□□□□ -0.3
FAM3B-204ENST00000398652 FLVCR1-AS1Q8TAF5 88 aa13.19□□□□□ -0.3
FAM3B-204ENST00000398652 ENOX1Q8TC92 643 aaKnown RBP13.19□□□□□ -0.3
FAM3B-204ENST00000398652 ZNF398Q8TD17 642 aa13.19□□□□□ -0.3
FAM3B-204ENST00000398652 CA5BP1Q8WTZ4 195 aa13.19□□□□□ -0.3
FAM3B-204ENST00000398652 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.19□□□□□ -0.3
FAM3B-204ENST00000398652 BTBD6Q96KE9 485 aa13.19□□□□□ -0.3
FAM3B-204ENST00000398652 ERGIC2Q96RQ1 377 aa13.19□□□□□ -0.3
FAM3B-204ENST00000398652 COG4Q9H9E3 785 aa13.19□□□□□ -0.3
FAM3B-204ENST00000398652 DLL4Q9NR61 685 aa13.19□□□□□ -0.3
FAM3B-204ENST00000398652 PKP3Q9Y446 797 aa13.19□□□□□ -0.3
FAM3B-204ENST00000398652 JMJD1CQ15652 2540 aa13.19□□□□□ -0.3
FAM3B-204ENST00000398652 RTTNQ86VV8 2226 aa13.19□□□□□ -0.3
FAM3B-204ENST00000398652 CSPG4Q6UVK1 2322 aa13.18□□□□□ -0.3
FAM3B-204ENST00000398652 NSG1A0A0A6YYJ2 146 aa13.18□□□□□ -0.3
FAM3B-204ENST00000398652 FOXO6A8MYZ6 492 aa13.18□□□□□ -0.3
FAM3B-204ENST00000398652 DDX3XO00571 662 aaKnown RBP eCLIP13.18□□□□□ -0.32e-6■■■■□ 26.5
FAM3B-204ENST00000398652 BUD23O43709 281 aaKnown RBP13.18□□□□□ -0.3
FAM3B-204ENST00000398652 BMP10O95393 424 aa13.18□□□□□ -0.3
FAM3B-204ENST00000398652 WDPCPO95876 746 aa13.18□□□□□ -0.3
FAM3B-204ENST00000398652 UQCRHP07919 91 aa13.18□□□□□ -0.3
FAM3B-204ENST00000398652 CHRM5P08912 532 aaPredicted RBP13.18□□□□□ -0.3
FAM3B-204ENST00000398652 NSG1P42857 185 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 275.1 ms