RNA–Protein interactions for RNA: ENST00000398465.3

VPREB3-202, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

TSL 3 BASIC

Gene VPREB3, Length 503 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-202ENST00000398465 CD9P21926 228 aa12.36□□□□□ -0.43
VPREB3-202ENST00000398465 ELK3P41970 407 aa12.36□□□□□ -0.43
VPREB3-202ENST00000398465 RPL21P46778 160 aaKnown RBP12.36□□□□□ -0.43
VPREB3-202ENST00000398465 CLCN7P51798 805 aa12.36□□□□□ -0.43
VPREB3-202ENST00000398465 MPP1Q00013 466 aa12.36□□□□□ -0.43
VPREB3-202ENST00000398465 RHDQ02161 417 aa12.36□□□□□ -0.43
VPREB3-202ENST00000398465 ABHD18Q0P651 414 aa12.36□□□□□ -0.43
VPREB3-202ENST00000398465 GRB7Q14451 532 aa12.36□□□□□ -0.43
VPREB3-202ENST00000398465 KCNAB1Q14722 419 aa12.36□□□□□ -0.43
VPREB3-202ENST00000398465 SLC5A12Q1EHB4 618 aa12.36□□□□□ -0.43
VPREB3-202ENST00000398465 ZNF789Q5FWF6 425 aa12.36□□□□□ -0.43
VPREB3-202ENST00000398465 LRRC8EQ6NSJ5 796 aa12.36□□□□□ -0.43
VPREB3-202ENST00000398465 RASGRP3Q8IV61 690 aa12.36□□□□□ -0.43
VPREB3-202ENST00000398465 IL22RA1Q8N6P7 574 aa12.36□□□□□ -0.43
VPREB3-202ENST00000398465 OR2L8Q8NGY9 312 aa12.36□□□□□ -0.43
VPREB3-202ENST00000398465 GIMAP7Q8NHV1 300 aa12.36□□□□□ -0.43
VPREB3-202ENST00000398465 FLVCR1-AS1Q8TAF5 88 aa12.36□□□□□ -0.43
VPREB3-202ENST00000398465 SKA2Q8WVK7 121 aaPredicted RBP12.36□□□□□ -0.43
VPREB3-202ENST00000398465 KIAA1143Q96AT1 154 aaPredicted RBP12.36□□□□□ -0.43
VPREB3-202ENST00000398465 RAD51AP1Q96B01 352 aa12.36□□□□□ -0.43
VPREB3-202ENST00000398465 SLC22A18Q96BI1 424 aa12.36□□□□□ -0.43
VPREB3-202ENST00000398465 ZNF501Q96CX3 271 aaPredicted RBP12.36□□□□□ -0.43
VPREB3-202ENST00000398465 UBL7Q96S82 380 aaPredicted RBP12.36□□□□□ -0.43
VPREB3-202ENST00000398465 ERP44Q9BS26 406 aa12.36□□□□□ -0.43
VPREB3-202ENST00000398465 EFHD1Q9BUP0 239 aa12.36□□□□□ -0.43
VPREB3-202ENST00000398465 TRIM31Q9BZY9 425 aa12.36□□□□□ -0.43
VPREB3-202ENST00000398465 PHACTR1Q9C0D0 580 aa12.36□□□□□ -0.43
VPREB3-202ENST00000398465 CHRNA10Q9GZZ6 450 aa12.36□□□□□ -0.43
VPREB3-202ENST00000398465 RAB17Q9H0T7 212 aa12.36□□□□□ -0.43
VPREB3-202ENST00000398465 PLAC1Q9HBJ0 212 aa12.36□□□□□ -0.43
VPREB3-202ENST00000398465 FAM114A2Q9NRY5 505 aa12.36□□□□□ -0.43
VPREB3-202ENST00000398465 IARS2Q9NSE4 1012 aaKnown RBP12.36□□□□□ -0.43
VPREB3-202ENST00000398465 SPATA7Q9P0W8 599 aa12.36□□□□□ -0.43
VPREB3-202ENST00000398465 CORO1CQ9ULV4 474 aaPredicted RBP12.36□□□□□ -0.43
VPREB3-202ENST00000398465 MED16Q9Y2X0 877 aa12.36□□□□□ -0.43
VPREB3-202ENST00000398465 PCDHGA4Q9Y5G9 962 aa12.36□□□□□ -0.43
VPREB3-202ENST00000398465 FER1L5A0AVI2 2057 aa12.35□□□□□ -0.43
VPREB3-202ENST00000398465 SLC9B1P1A6NJY1 282 aa12.35□□□□□ -0.43
VPREB3-202ENST00000398465 EFSO43281 561 aa12.35□□□□□ -0.43
VPREB3-202ENST00000398465 RAD51CO43502 376 aa12.35□□□□□ -0.43
VPREB3-202ENST00000398465 VPS26AO75436 327 aa12.35□□□□□ -0.43
VPREB3-202ENST00000398465 FKBP9O95302 570 aa12.35□□□□□ -0.43
VPREB3-202ENST00000398465 C1orf105O95561 183 aa12.35□□□□□ -0.43
VPREB3-202ENST00000398465 TUBB4AP04350 444 aa12.35□□□□□ -0.43
VPREB3-202ENST00000398465 CBSLP0DN79 551 aa12.35□□□□□ -0.43
VPREB3-202ENST00000398465 ERVK-10P10266 1014 aa12.35□□□□□ -0.43
VPREB3-202ENST00000398465 ST6GAL1P15907 406 aa12.35□□□□□ -0.43
VPREB3-202ENST00000398465 CBSP35520 551 aa12.35□□□□□ -0.43
VPREB3-202ENST00000398465 STAT5AP42229 794 aa12.35□□□□□ -0.43
VPREB3-202ENST00000398465 ZNF549Q6P9A3 640 aa12.35□□□□□ -0.43
VPREB3-202ENST00000398465 CNSTQ6PJW8 725 aa12.35□□□□□ -0.43
VPREB3-202ENST00000398465 VASH2Q86V25 355 aa12.35□□□□□ -0.43
VPREB3-202ENST00000398465 IGDCC3Q8IVU1 814 aa12.35□□□□□ -0.43
VPREB3-202ENST00000398465 UNC5BQ8IZJ1 945 aa12.35□□□□□ -0.43
VPREB3-202ENST00000398465 C19orf47Q8N9M1 422 aaKnown RBP12.35□□□□□ -0.43
VPREB3-202ENST00000398465 ZSCAN1Q8NBB4 408 aa12.35□□□□□ -0.43
VPREB3-202ENST00000398465 HMGCLL1Q8TB92 370 aa12.35□□□□□ -0.43
VPREB3-202ENST00000398465 CD200R1Q8TD46 325 aa12.35□□□□□ -0.43
VPREB3-202ENST00000398465 PPM1MQ96MI6 270 aa12.35□□□□□ -0.43
VPREB3-202ENST00000398465 TRAPPC9Q96Q05 1148 aa12.35□□□□□ -0.43
VPREB3-202ENST00000398465 OR2A14Q96R47 310 aa12.35□□□□□ -0.43
VPREB3-202ENST00000398465 AARSD1Q9BTE6 412 aaKnown RBP12.35□□□□□ -0.43
VPREB3-202ENST00000398465 CDC23Q9UJX2 597 aa12.35□□□□□ -0.43
VPREB3-202ENST00000398465 PLAGL1Q9UM63 463 aa12.35□□□□□ -0.43
VPREB3-202ENST00000398465 SNX24Q9Y343 169 aa12.35□□□□□ -0.43
VPREB3-202ENST00000398465 ATMQ13315 3056 aa12.35□□□□□ -0.43
VPREB3-202ENST00000398465 CACNA1GO43497 2377 aa12.35□□□□□ -0.43
VPREB3-202ENST00000398465 PCM1Q15154 2024 aa12.35□□□□□ -0.43
VPREB3-202ENST00000398465 ERVH48-1M5A8F1 160 aa12.34□□□□□ -0.43
VPREB3-202ENST00000398465 KIF2AO00139 706 aaPredicted RBP12.34□□□□□ -0.43
VPREB3-202ENST00000398465 MYO1CO00159 1063 aa12.34□□□□□ -0.43
VPREB3-202ENST00000398465 EIF3HO15372 352 aaKnown RBP eCLIP12.34□□□□□ -0.43
VPREB3-202ENST00000398465 CPNE3O75131 537 aaKnown RBP12.34□□□□□ -0.43
VPREB3-202ENST00000398465 PSIP1O75475 530 aaKnown RBP12.34□□□□□ -0.43
VPREB3-202ENST00000398465 SPAG6O75602 509 aa12.34□□□□□ -0.43
VPREB3-202ENST00000398465 KIAA0754O94854 1291 aa12.34□□□□□ -0.43
VPREB3-202ENST00000398465 TIAF1O95411 115 aa12.34□□□□□ -0.43
VPREB3-202ENST00000398465 CATP04040 527 aaKnown RBP12.34□□□□□ -0.43
VPREB3-202ENST00000398465 MPC1LP0DKB6 136 aa12.34□□□□□ -0.43
VPREB3-202ENST00000398465 ERGP11308 486 aa12.34□□□□□ -0.43
VPREB3-202ENST00000398465 LIFP15018 202 aa12.34□□□□□ -0.43
VPREB3-202ENST00000398465 ZNF28P17035 718 aa12.34□□□□□ -0.43
VPREB3-202ENST00000398465 PEBP1P30086 187 aaKnown RBP12.34□□□□□ -0.43
VPREB3-202ENST00000398465 BDKRB1P46663 353 aa12.34□□□□□ -0.43
VPREB3-202ENST00000398465 CAV1Q03135 178 aa12.34□□□□□ -0.43
VPREB3-202ENST00000398465 ABRQ12979 859 aa12.34□□□□□ -0.43
VPREB3-202ENST00000398465 PDIA2Q13087 525 aaKnown RBP12.34□□□□□ -0.43
VPREB3-202ENST00000398465 WHAMMP3Q1A5X7 153 aa12.34□□□□□ -0.43
VPREB3-202ENST00000398465 KLHL38Q2WGJ6 581 aa12.34□□□□□ -0.43
VPREB3-202ENST00000398465 ACSBG2Q5FVE4 666 aa12.34□□□□□ -0.43
VPREB3-202ENST00000398465 ARHGAP40Q5TG30 622 aa12.34□□□□□ -0.43
VPREB3-202ENST00000398465 DUPD1Q68J44 220 aa12.34□□□□□ -0.43
VPREB3-202ENST00000398465 UGT3A1Q6NUS8 523 aa12.34□□□□□ -0.43
VPREB3-202ENST00000398465 TIPARPQ7Z3E1 657 aaKnown RBP12.34□□□□□ -0.43
VPREB3-202ENST00000398465 LINC01555Q8NAE3 123 aa12.34□□□□□ -0.43
VPREB3-202ENST00000398465 FBXO15Q8NCQ5 510 aaPredicted RBP12.34□□□□□ -0.43
VPREB3-202ENST00000398465 LSM14AQ8ND56 463 aaKnown RBP12.34□□□□□ -0.43
VPREB3-202ENST00000398465 CFAP61Q8NHU2 1237 aa12.34□□□□□ -0.43
VPREB3-202ENST00000398465 FAM136AQ96C01 138 aa12.34□□□□□ -0.43
VPREB3-202ENST00000398465 CFAP36Q96G28 342 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms