RNA–Protein interactions for RNA: ENST00000397954.6

UBE3A-202, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5 BASIC

Gene UBE3A, Length 2,873 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-202ENST00000397954 WASF3Q9UPY6 502 aa3.71□□□□□ -1.82
UBE3A-202ENST00000397954 PCNTO95613 3336 aa3.71□□□□□ -1.82
UBE3A-202ENST00000397954 CACNA1IQ9P0X4 2223 aa3.71□□□□□ -1.82
UBE3A-202ENST00000397954 IGLV3-16A0A075B6K0 115 aa3.7□□□□□ -1.82
UBE3A-202ENST00000397954 TBC1D3DA0A087WVF3 549 aa3.7□□□□□ -1.82
UBE3A-202ENST00000397954 TBC1D3IA0A087WXS9 549 aa3.7□□□□□ -1.82
UBE3A-202ENST00000397954 TBC1D3EA0A087X179 549 aa3.7□□□□□ -1.82
UBE3A-202ENST00000397954 TBC1D3KA0A087X1G2 549 aa3.7□□□□□ -1.82
UBE3A-202ENST00000397954 TRBV5-4A0A0C4DH59 114 aa3.7□□□□□ -1.82
UBE3A-202ENST00000397954 TBC1D3FA6NER0 549 aaPredicted RBP3.7□□□□□ -1.82
UBE3A-202ENST00000397954 CLCA1A8K7I4 914 aa3.7□□□□□ -1.82
UBE3A-202ENST00000397954 TBC1D3LB9A6J9 549 aa3.7□□□□□ -1.82
UBE3A-202ENST00000397954 RTCAO00442 366 aaKnown RBP3.7□□□□□ -1.82
UBE3A-202ENST00000397954 KPNA3O00505 521 aaPredicted RBP3.7□□□□□ -1.82
UBE3A-202ENST00000397954 NTN3O00634 580 aaPredicted RBP3.7□□□□□ -1.82
UBE3A-202ENST00000397954 CHUKO15111 745 aa3.7□□□□□ -1.82
UBE3A-202ENST00000397954 AQP9O43315 295 aa3.7□□□□□ -1.82
UBE3A-202ENST00000397954 SRGAP2O75044 1071 aa3.7□□□□□ -1.82
UBE3A-202ENST00000397954 ABHD16AO95870 558 aa3.7□□□□□ -1.82
UBE3A-202ENST00000397954 HBQ1P09105 142 aa3.7□□□□□ -1.82
UBE3A-202ENST00000397954 TBC1D3HP0C7X1 549 aa3.7□□□□□ -1.82
UBE3A-202ENST00000397954 THEGLP0DJG4 465 aa3.7□□□□□ -1.82
UBE3A-202ENST00000397954 SNRPBP14678 240 aaKnown RBP3.7□□□□□ -1.82
UBE3A-202ENST00000397954 XRCC1P18887 633 aaPredicted RBP3.7□□□□□ -1.82
UBE3A-202ENST00000397954 HRH2P25021 359 aa3.7□□□□□ -1.82
UBE3A-202ENST00000397954 SPAM1P38567 509 aa3.7□□□□□ -1.82
UBE3A-202ENST00000397954 PPARDQ03181 441 aa3.7□□□□□ -1.82
UBE3A-202ENST00000397954 CDK18Q07002 472 aa3.7□□□□□ -1.82
UBE3A-202ENST00000397954 DMWDQ09019 674 aa3.7□□□□□ -1.82
UBE3A-202ENST00000397954 CCDC173Q0VFZ6 552 aa3.7□□□□□ -1.82
UBE3A-202ENST00000397954 TRIP6Q15654 476 aaKnown RBP3.7□□□□□ -1.82
UBE3A-202ENST00000397954 ACCSLQ4AC99 568 aa3.7□□□□□ -1.82
UBE3A-202ENST00000397954 ATG16L1Q676U5 607 aa3.7□□□□□ -1.82
UBE3A-202ENST00000397954 TBC1D3GQ6DHY5 549 aa3.7□□□□□ -1.82
UBE3A-202ENST00000397954 TBC1D3CQ6IPX1 549 aa3.7□□□□□ -1.82
UBE3A-202ENST00000397954 CRTC1Q6UUV9 634 aa3.7□□□□□ -1.82
UBE3A-202ENST00000397954 CYP2R1Q6VVX0 501 aa3.7□□□□□ -1.82
UBE3A-202ENST00000397954 CYS1Q717R9 158 aa3.7□□□□□ -1.82
UBE3A-202ENST00000397954 H1FNTQ75WM6 255 aaPredicted RBP3.7□□□□□ -1.82
UBE3A-202ENST00000397954 PEX26Q7Z412 305 aa3.7□□□□□ -1.82
UBE3A-202ENST00000397954 TMEM139Q8IV31 216 aa3.7□□□□□ -1.82
UBE3A-202ENST00000397954 TBC1D3Q8IZP1 549 aaPredicted RBP3.7□□□□□ -1.82
UBE3A-202ENST00000397954 RBFAQ8N0V3 343 aa3.7□□□□□ -1.82
UBE3A-202ENST00000397954 PQLC3Q8N755 202 aa3.7□□□□□ -1.82
UBE3A-202ENST00000397954 EMC1Q8N766 993 aa3.7□□□□□ -1.82
UBE3A-202ENST00000397954 EIF1ADQ8N9N8 165 aaKnown RBP3.7□□□□□ -1.82
UBE3A-202ENST00000397954 FBXO15Q8NCQ5 510 aaPredicted RBP3.7□□□□□ -1.82
UBE3A-202ENST00000397954 GPR156Q8NFN8 814 aa3.7□□□□□ -1.82
UBE3A-202ENST00000397954 OR7D4Q8NG98 312 aa3.7□□□□□ -1.82
UBE3A-202ENST00000397954 SLC35B2Q8TB61 432 aa3.7□□□□□ -1.82
UBE3A-202ENST00000397954 ARRDC2Q8TBH0 407 aa3.7□□□□□ -1.82
UBE3A-202ENST00000397954 BRIX1Q8TDN6 353 aaKnown RBP3.7□□□□□ -1.82
UBE3A-202ENST00000397954 GANCQ8TET4 914 aa3.7□□□□□ -1.82
UBE3A-202ENST00000397954 NEIL1Q96FI4 390 aaPredicted RBP3.7□□□□□ -1.82
UBE3A-202ENST00000397954 FAM84AQ96KN4 292 aa3.7□□□□□ -1.82
UBE3A-202ENST00000397954 KLHL32Q96NJ5 620 aa3.7□□□□□ -1.82
UBE3A-202ENST00000397954 JMJD8Q96S16 334 aa3.7□□□□□ -1.82
UBE3A-202ENST00000397954 DPEP2Q9H4A9 486 aa3.7□□□□□ -1.82
UBE3A-202ENST00000397954 GAREM1Q9H706 876 aa3.7□□□□□ -1.82
UBE3A-202ENST00000397954 BRF2Q9HAW0 419 aa3.7□□□□□ -1.82
UBE3A-202ENST00000397954 XAB2Q9HCS7 855 aaKnown RBP3.7□□□□□ -1.82
UBE3A-202ENST00000397954 TMCO1Q9UM00 188 aa3.7□□□□□ -1.82
UBE3A-202ENST00000397954 CAMK2AQ9UQM7 478 aa3.7□□□□□ -1.82
UBE3A-202ENST00000397954 ENTPD2Q9Y5L3 495 aa3.7□□□□□ -1.82
UBE3A-202ENST00000397954 ALG6Q9Y672 507 aa3.7□□□□□ -1.82
UBE3A-202ENST00000397954 CCDC187A0A096LP49 1063 aa3.7□□□□□ -1.82
UBE3A-202ENST00000397954 HEATR9A2RTY3 570 aa3.7□□□□□ -1.82
UBE3A-202ENST00000397954 ANKRD66B4E2M5 251 aa3.7□□□□□ -1.82
UBE3A-202ENST00000397954 H3BS24 57 aa3.7□□□□□ -1.82
UBE3A-202ENST00000397954 PYCARD-AS1I3L0S3 204 aa3.7□□□□□ -1.82
UBE3A-202ENST00000397954 I6L893 689 aaPredicted RBP3.7□□□□□ -1.82
UBE3A-202ENST00000397954 MATN4O95460 622 aa3.7□□□□□ -1.82
UBE3A-202ENST00000397954 TTC4O95801 387 aa3.7□□□□□ -1.82
UBE3A-202ENST00000397954 MPIG6BO95866 241 aa3.7□□□□□ -1.82
UBE3A-202ENST00000397954 CBSLP0DN79 551 aa3.7□□□□□ -1.82
UBE3A-202ENST00000397954 C6P13671 934 aa3.7□□□□□ -1.82
UBE3A-202ENST00000397954 OGNP20774 298 aaKnown RBP3.7□□□□□ -1.82
UBE3A-202ENST00000397954 FPR1P21462 350 aa3.7□□□□□ -1.82
UBE3A-202ENST00000397954 CBSP35520 551 aa3.7□□□□□ -1.82
UBE3A-202ENST00000397954 SPINT3P49223 89 aa3.7□□□□□ -1.82
UBE3A-202ENST00000397954 PPP5CP53041 499 aa3.7□□□□□ -1.82
UBE3A-202ENST00000397954 RNASE9P60153 205 aaKnown RBP3.7□□□□□ -1.82
UBE3A-202ENST00000397954 ILF3Q12906 894 aaKnown RBP eCLIP3.7□□□□□ -1.827e-11■■■■□ 22.7
UBE3A-202ENST00000397954 CDKN3Q16667 212 aa3.7□□□□□ -1.82
UBE3A-202ENST00000397954 CDO1Q16878 200 aa3.7□□□□□ -1.82
UBE3A-202ENST00000397954 CDKL4Q5MAI5 379 aa3.7□□□□□ -1.82
UBE3A-202ENST00000397954 METTL2BQ6P1Q9 378 aaKnown RBP3.7□□□□□ -1.82
UBE3A-202ENST00000397954 KDELC1Q6UW63 502 aa3.7□□□□□ -1.82
UBE3A-202ENST00000397954 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.7□□□□□ -1.82
UBE3A-202ENST00000397954 RFX6Q8HWS3 928 aa3.7□□□□□ -1.82
UBE3A-202ENST00000397954 SHISA5Q8N114 240 aa3.7□□□□□ -1.82
UBE3A-202ENST00000397954 CFAP52Q8N1V2 620 aa3.7□□□□□ -1.82
UBE3A-202ENST00000397954 RAB42Q8N4Z0 105 aa3.7□□□□□ -1.82
UBE3A-202ENST00000397954 ZCCHC9Q8N567 271 aaKnown RBP3.7□□□□□ -1.82
UBE3A-202ENST00000397954 CDYL2Q8N8U2 506 aa3.7□□□□□ -1.82
UBE3A-202ENST00000397954 GPR150Q8NGU9 434 aa3.7□□□□□ -1.82
UBE3A-202ENST00000397954 CALML6Q8TD86 181 aa3.7□□□□□ -1.82
UBE3A-202ENST00000397954 MAGEC3Q8TD91 643 aa3.7□□□□□ -1.82
UBE3A-202ENST00000397954 PDLIM2Q96JY6 352 aa3.7□□□□□ -1.82
UBE3A-202ENST00000397954 CNDP2Q96KP4 475 aaKnown RBP3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms