RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 AKTIPQ9H8T0 292 aa5.35□□□□□ -1.55
PTPRD-205ENST00000397611 PAQR5Q9NXK6 330 aaPredicted RBP5.35□□□□□ -1.55
PTPRD-205ENST00000397611 SPASTQ9UBP0 616 aa5.35□□□□□ -1.55
PTPRD-205ENST00000397611 UBA2Q9UBT2 640 aaPredicted RBP5.35□□□□□ -1.55
PTPRD-205ENST00000397611 PRKAB1Q9Y478 270 aa5.35□□□□□ -1.55
PTPRD-205ENST00000397611 ZNFX1Q9P2E3 1918 aaKnown RBP5.35□□□□□ -1.55
PTPRD-205ENST00000397611 TRBV5-3A0A0A0MS03 114 aa5.35□□□□□ -1.55
PTPRD-205ENST00000397611 A0A1W2PQ67 120 aa5.35□□□□□ -1.55
PTPRD-205ENST00000397611 HLA-DQB2P05538 268 aa5.35□□□□□ -1.55
PTPRD-205ENST00000397611 PGRP06401 933 aa5.35□□□□□ -1.55
PTPRD-205ENST00000397611 YES1P07947 543 aa5.35□□□□□ -1.55
PTPRD-205ENST00000397611 CR2P20023 1033 aa5.35□□□□□ -1.55
PTPRD-205ENST00000397611 EN1Q05925 392 aaPredicted RBP5.35□□□□□ -1.55
PTPRD-205ENST00000397611 CYBRD1Q53TN4 286 aa5.35□□□□□ -1.55
PTPRD-205ENST00000397611 CHST15Q7LFX5 561 aaPredicted RBP5.35□□□□□ -1.55
PTPRD-205ENST00000397611 ZNF598Q86UK7 904 aaKnown RBP5.35□□□□□ -1.55
PTPRD-205ENST00000397611 TMCO6Q96DC7 493 aa5.35□□□□□ -1.55
PTPRD-205ENST00000397611 SLC39A3Q9BRY0 314 aa5.35□□□□□ -1.55
PTPRD-205ENST00000397611 BEX2Q9BXY8 128 aa5.35□□□□□ -1.55
PTPRD-205ENST00000397611 SLC39A8Q9C0K1 460 aa5.35□□□□□ -1.55
PTPRD-205ENST00000397611 ADGRE2Q9UHX3 823 aa5.35□□□□□ -1.55
PTPRD-205ENST00000397611 SCAF8Q9UPN6 1271 aaKnown RBP5.35□□□□□ -1.55
PTPRD-205ENST00000397611 PRAMEF33A0A0G2JMD5 474 aa5.34□□□□□ -1.55
PTPRD-205ENST00000397611 A8MVJ9 347 aa5.34□□□□□ -1.55
PTPRD-205ENST00000397611 PRAMEF10O60809 474 aa5.34□□□□□ -1.55
PTPRD-205ENST00000397611 OTCP00480 354 aa5.34□□□□□ -1.55
PTPRD-205ENST00000397611 PABPC1P11940 636 aaKnown RBP5.34□□□□□ -1.55
PTPRD-205ENST00000397611 AKR1A1P14550 325 aa5.34□□□□□ -1.55
PTPRD-205ENST00000397611 PXNP49023 591 aaPredicted RBP5.34□□□□□ -1.55
PTPRD-205ENST00000397611 IL2P60568 153 aa5.34□□□□□ -1.55
PTPRD-205ENST00000397611 MRPS6P82932 125 aaKnown RBP5.34□□□□□ -1.55
PTPRD-205ENST00000397611 DSC3Q14574 896 aa5.34□□□□□ -1.55
PTPRD-205ENST00000397611 SPOUT1Q5T280 376 aaKnown RBP5.34□□□□□ -1.55
PTPRD-205ENST00000397611 SNX20Q7Z614 316 aa5.34□□□□□ -1.55
PTPRD-205ENST00000397611 TWIST2Q8WVJ9 160 aa5.34□□□□□ -1.55
PTPRD-205ENST00000397611 MED28Q9H204 178 aa5.34□□□□□ -1.55
PTPRD-205ENST00000397611 ACTR8Q9H981 624 aa5.34□□□□□ -1.55
PTPRD-205ENST00000397611 CLN6Q9NWW5 311 aa5.34□□□□□ -1.55
PTPRD-205ENST00000397611 VPS4AQ9UN37 437 aa5.34□□□□□ -1.55
PTPRD-205ENST00000397611 KRBA1A5PL33 1030 aa5.34□□□□□ -1.55
PTPRD-205ENST00000397611 NEMP2A6NFY4 417 aa5.34□□□□□ -1.55
PTPRD-205ENST00000397611 ACOX3O15254 700 aa5.34□□□□□ -1.55
PTPRD-205ENST00000397611 DYNC1LI2O43237 492 aaPredicted RBP5.34□□□□□ -1.55
PTPRD-205ENST00000397611 B3GAT3O94766 335 aa5.34□□□□□ -1.55
PTPRD-205ENST00000397611 IFNA14P01570 189 aa5.34□□□□□ -1.55
PTPRD-205ENST00000397611 ATXN1LP0C7T5 689 aaKnown RBP5.34□□□□□ -1.55
PTPRD-205ENST00000397611 CD36P16671 472 aa5.34□□□□□ -1.55
PTPRD-205ENST00000397611 S100A3P33764 101 aa5.34□□□□□ -1.55
PTPRD-205ENST00000397611 RAB25P57735 213 aa5.34□□□□□ -1.55
PTPRD-205ENST00000397611 AP1S1P61966 158 aa5.34□□□□□ -1.55
PTPRD-205ENST00000397611 ZNF621Q6ZSS3 439 aa5.34□□□□□ -1.55
PTPRD-205ENST00000397611 RAVER1Q8IY67 606 aaKnown RBP5.34□□□□□ -1.55
PTPRD-205ENST00000397611 ZNF683Q8IZ20 524 aa5.34□□□□□ -1.55
PTPRD-205ENST00000397611 OVCA2Q8WZ82 227 aa5.34□□□□□ -1.55
PTPRD-205ENST00000397611 RNF39Q9H2S5 420 aa5.34□□□□□ -1.55
PTPRD-205ENST00000397611 CPNE5Q9HCH3 593 aa5.34□□□□□ -1.55
PTPRD-205ENST00000397611 RNF181Q9P0P0 153 aa5.34□□□□□ -1.55
PTPRD-205ENST00000397611 PCDH10Q9P2E7 1040 aa5.34□□□□□ -1.55
PTPRD-205ENST00000397611 ERGIC3Q9Y282 383 aa5.34□□□□□ -1.55
PTPRD-205ENST00000397611 GABARAPO95166 117 aa5.34□□□□□ -1.55
PTPRD-205ENST00000397611 IGLV3-27P01718 113 aa5.34□□□□□ -1.55
PTPRD-205ENST00000397611 RPLP0P05388 317 aaKnown RBP5.34□□□□□ -1.55
PTPRD-205ENST00000397611 PTX3P26022 381 aaPredicted RBP5.34□□□□□ -1.55
PTPRD-205ENST00000397611 NFATC3Q12968 1075 aa5.34□□□□□ -1.55
PTPRD-205ENST00000397611 ZNF460Q14592 562 aa5.34□□□□□ -1.55
PTPRD-205ENST00000397611 MEP1AQ16819 746 aa5.34□□□□□ -1.55
PTPRD-205ENST00000397611 SYT16Q17RD7 645 aa5.34□□□□□ -1.55
PTPRD-205ENST00000397611 LACC1Q8IV20 430 aa5.34□□□□□ -1.55
PTPRD-205ENST00000397611 EFHD2Q96C19 240 aaPredicted RBP5.34□□□□□ -1.55
PTPRD-205ENST00000397611 ZNF641Q96N77 438 aaPredicted RBP5.34□□□□□ -1.55
PTPRD-205ENST00000397611 CDC14AQ9UNH5 594 aa5.34□□□□□ -1.55
PTPRD-205ENST00000397611 UGT2A1Q9Y4X1 527 aa5.34□□□□□ -1.55
PTPRD-205ENST00000397611 TMEM233B4DJY2 109 aa5.34□□□□□ -1.55
PTPRD-205ENST00000397611 CRYZL1O95825 349 aa5.34□□□□□ -1.55
PTPRD-205ENST00000397611 PSKH1P11801 424 aa5.34□□□□□ -1.55
PTPRD-205ENST00000397611 PCDH1Q08174 1060 aa5.34□□□□□ -1.55
PTPRD-205ENST00000397611 ARHGEF7Q14155 803 aa5.34□□□□□ -1.55
PTPRD-205ENST00000397611 ZNF517Q6ZMY9 492 aaPredicted RBP5.34□□□□□ -1.55
PTPRD-205ENST00000397611 GPRIN3Q6ZVF9 776 aa5.34□□□□□ -1.55
PTPRD-205ENST00000397611 GPR142Q7Z601 462 aa5.34□□□□□ -1.55
PTPRD-205ENST00000397611 PIH1D2Q8WWB5 315 aa5.34□□□□□ -1.55
PTPRD-205ENST00000397611 ACDQ96AP0 544 aa5.34□□□□□ -1.55
PTPRD-205ENST00000397611 DHRS1Q96LJ7 313 aa5.34□□□□□ -1.55
PTPRD-205ENST00000397611 PPM1MQ96MI6 270 aa5.34□□□□□ -1.55
PTPRD-205ENST00000397611 MROQ9BYG7 248 aa5.34□□□□□ -1.55
PTPRD-205ENST00000397611 TRIT1Q9H3H1 467 aaKnown RBP5.34□□□□□ -1.55
PTPRD-205ENST00000397611 SSR3Q9UNL2 185 aa5.34□□□□□ -1.55
PTPRD-205ENST00000397611 FFAR3O14843 346 aa5.34□□□□□ -1.55
PTPRD-205ENST00000397611 GPR42O15529 346 aa5.34□□□□□ -1.55
PTPRD-205ENST00000397611 SH3BGRLO75368 114 aa5.34□□□□□ -1.55
PTPRD-205ENST00000397611 CD40LGP29965 261 aa5.34□□□□□ -1.55
PTPRD-205ENST00000397611 RYKP34925 604 aa5.34□□□□□ -1.55
PTPRD-205ENST00000397611 HMGCLP35914 325 aa5.34□□□□□ -1.55
PTPRD-205ENST00000397611 NUP62P37198 522 aaPredicted RBP5.34□□□□□ -1.55
PTPRD-205ENST00000397611 CCR10P46092 362 aa5.34□□□□□ -1.55
PTPRD-205ENST00000397611 GSTM4Q03013 218 aa5.34□□□□□ -1.55
PTPRD-205ENST00000397611 HSF2Q03933 536 aa5.34□□□□□ -1.55
PTPRD-205ENST00000397611 RUNDC3AQ59EK9 446 aa5.34□□□□□ -1.55
PTPRD-205ENST00000397611 RAP1GAP2Q684P5 730 aa5.34□□□□□ -1.55
PTPRD-205ENST00000397611 AGMOQ6ZNB7 445 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms