RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 TMEM233B4DJY2 109 aa26.73■■□□□ 1.87
CPNE1-203ENST00000397442 K7EPI3 171 aa26.73■■□□□ 1.87
CPNE1-203ENST00000397442 HRO43593 1189 aa26.73■■□□□ 1.87
CPNE1-203ENST00000397442 SH2D4BQ5SQS7 431 aa26.73■■□□□ 1.87
CPNE1-203ENST00000397442 FAM219BQ5XKK7 198 aa26.73■■□□□ 1.87
CPNE1-203ENST00000397442 TTC23LQ6PF05 361 aa26.73■■□□□ 1.87
CPNE1-203ENST00000397442 AGTRAPQ6RW13 159 aa26.73■■□□□ 1.87
CPNE1-203ENST00000397442 TEX9Q8N6V9 391 aa26.73■■□□□ 1.87
CPNE1-203ENST00000397442 MAGEC3Q8TD91 643 aa26.73■■□□□ 1.87
CPNE1-203ENST00000397442 AGAP11Q8TF27 550 aa26.73■■□□□ 1.87
CPNE1-203ENST00000397442 ZNF480Q8WV37 535 aa26.73■■□□□ 1.87
CPNE1-203ENST00000397442 PYCR2Q96C36 320 aa26.73■■□□□ 1.87
CPNE1-203ENST00000397442 MID1IP1Q9NPA3 183 aa26.73■■□□□ 1.87
CPNE1-203ENST00000397442 OR52A4PA6NMU1 304 aa26.73■■□□□ 1.87
CPNE1-203ENST00000397442 OR7A17O14581 309 aa26.73■■□□□ 1.87
CPNE1-203ENST00000397442 BCAT2O15382 392 aaPredicted RBP26.73■■□□□ 1.87
CPNE1-203ENST00000397442 ALOX15P16050 662 aaPredicted RBP26.73■■□□□ 1.87
CPNE1-203ENST00000397442 PRDX3P30048 256 aaKnown RBP26.73■■□□□ 1.87
CPNE1-203ENST00000397442 CSNK1EP49674 416 aaKnown RBP26.73■■□□□ 1.87
CPNE1-203ENST00000397442 NXPH1P58417 271 aa26.73■■□□□ 1.87
CPNE1-203ENST00000397442 ILF3Q12906 894 aaKnown RBP eCLIP26.73■■□□□ 1.877e-7■■■■■ 35.6
CPNE1-203ENST00000397442 TBC1D21Q8IYX1 336 aa26.73■■□□□ 1.87
CPNE1-203ENST00000397442 ATL1Q8WXF7 558 aa26.73■■□□□ 1.87
CPNE1-203ENST00000397442 RAD51AP1Q96B01 352 aa26.73■■□□□ 1.87
CPNE1-203ENST00000397442 TRIT1Q9H3H1 467 aaKnown RBP26.73■■□□□ 1.87
CPNE1-203ENST00000397442 SLC32A1Q9H598 525 aa26.73■■□□□ 1.87
CPNE1-203ENST00000397442 NOL11Q9H8H0 719 aaKnown RBP26.73■■□□□ 1.87
CPNE1-203ENST00000397442 USH1CQ9Y6N9 552 aa26.73■■□□□ 1.87
CPNE1-203ENST00000397442 USP34Q70CQ2 3546 aa26.72■■□□□ 1.87
CPNE1-203ENST00000397442 MATN2O00339 956 aa26.72■■□□□ 1.87
CPNE1-203ENST00000397442 VILLO15195 856 aa26.72■■□□□ 1.87
CPNE1-203ENST00000397442 MLYCDO95822 493 aa26.72■■□□□ 1.87
CPNE1-203ENST00000397442 RPN2P04844 631 aa26.72■■□□□ 1.87
CPNE1-203ENST00000397442 CELA2BP08218 269 aaPredicted RBP26.72■■□□□ 1.87
CPNE1-203ENST00000397442 EPORP19235 508 aa26.72■■□□□ 1.87
CPNE1-203ENST00000397442 BLKP51451 505 aa26.72■■□□□ 1.87
CPNE1-203ENST00000397442 PRKG2Q13237 762 aa26.72■■□□□ 1.87
CPNE1-203ENST00000397442 RPE65Q16518 533 aa26.72■■□□□ 1.87
CPNE1-203ENST00000397442 PLK5Q496M5 336 aa26.72■■□□□ 1.87
CPNE1-203ENST00000397442 LRRC70Q7Z2Q7 622 aa26.72■■□□□ 1.87
CPNE1-203ENST00000397442 C11orf74Q86VG3 221 aa26.72■■□□□ 1.87
CPNE1-203ENST00000397442 WDR75Q8IWA0 830 aaKnown RBP26.72■■□□□ 1.87
CPNE1-203ENST00000397442 KLHDC8AQ8IYD2 350 aa26.72■■□□□ 1.87
CPNE1-203ENST00000397442 OR52B6Q8NGF0 335 aa26.72■■□□□ 1.87
CPNE1-203ENST00000397442 OR56A3Q8NH54 315 aa26.72■■□□□ 1.87
CPNE1-203ENST00000397442 MENTQ9BUN1 341 aa26.72■■□□□ 1.87
CPNE1-203ENST00000397442 IMP3Q9NV31 184 aaKnown RBP26.72■■□□□ 1.87
CPNE1-203ENST00000397442 DNAJC28Q9NX36 388 aa26.72■■□□□ 1.87
CPNE1-203ENST00000397442 SDK1Q7Z5N4 2213 aa26.72■■□□□ 1.87
CPNE1-203ENST00000397442 CSF2P04141 144 aa26.71■■□□□ 1.87
CPNE1-203ENST00000397442 NME1P15531 152 aaKnown RBP26.71■■□□□ 1.87
CPNE1-203ENST00000397442 LYSMD4Q5XG99 296 aa26.71■■□□□ 1.87
CPNE1-203ENST00000397442 SYVN1Q86TM6 617 aa26.71■■□□□ 1.87
CPNE1-203ENST00000397442 LRRC56Q8IYG6 542 aaPredicted RBP26.71■■□□□ 1.87
CPNE1-203ENST00000397442 ZNF382Q96SR6 550 aa26.71■■□□□ 1.87
CPNE1-203ENST00000397442 IPPKQ9H8X2 491 aa26.71■■□□□ 1.87
CPNE1-203ENST00000397442 TDRD6O60522 2096 aaKnown RBP26.71■■□□□ 1.87
CPNE1-203ENST00000397442 ARHGEF17Q96PE2 2063 aaPredicted RBP26.71■■□□□ 1.87
CPNE1-203ENST00000397442 TP53BP1Q12888 1972 aaPredicted RBP26.7■■□□□ 1.87
CPNE1-203ENST00000397442 A0A0G2JND7 137 aa26.7■■□□□ 1.87
CPNE1-203ENST00000397442 FGF4P08620 206 aa26.7■■□□□ 1.87
CPNE1-203ENST00000397442 JUNDP17535 347 aa26.7■■□□□ 1.87
CPNE1-203ENST00000397442 AVPR2P30518 371 aa26.7■■□□□ 1.87
CPNE1-203ENST00000397442 DHPSP49366 369 aaPredicted RBP26.7■■□□□ 1.87
CPNE1-203ENST00000397442 AFF3P51826 1226 aaKnown RBP26.7■■□□□ 1.87
CPNE1-203ENST00000397442 AQP5P55064 265 aa26.7■■□□□ 1.87
CPNE1-203ENST00000397442 RBBP7Q16576 425 aa26.7■■□□□ 1.87
CPNE1-203ENST00000397442 CACNA2D3Q8IZS8 1091 aa26.7■■□□□ 1.87
CPNE1-203ENST00000397442 CCDC197Q8NCU1 140 aa26.7■■□□□ 1.87
CPNE1-203ENST00000397442 PPFIBP2Q8ND30 876 aa26.7■■□□□ 1.87
CPNE1-203ENST00000397442 FERD3LQ96RJ6 166 aa26.7■■□□□ 1.87
CPNE1-203ENST00000397442 NRTNQ99748 197 aa26.7■■□□□ 1.87
CPNE1-203ENST00000397442 LRRC61Q9BV99 259 aa26.7■■□□□ 1.87
CPNE1-203ENST00000397442 GSDMCQ9BYG8 508 aa26.7■■□□□ 1.87
CPNE1-203ENST00000397442 INTS7Q9NVH2 962 aaKnown RBP26.7■■□□□ 1.87
CPNE1-203ENST00000397442 APOBEC3BQ9UH17 382 aaKnown RBP26.7■■□□□ 1.87
CPNE1-203ENST00000397442 PLAGL1Q9UM63 463 aa26.7■■□□□ 1.87
CPNE1-203ENST00000397442 SLC22A14Q9Y267 594 aa26.7■■□□□ 1.87
CPNE1-203ENST00000397442 TRAF6Q9Y4K3 522 aa26.7■■□□□ 1.87
CPNE1-203ENST00000397442 ATXN2Q99700 1313 aaKnown RBP26.7■■□□□ 1.86
CPNE1-203ENST00000397442 WDR47O94967 919 aa26.7■■□□□ 1.86
CPNE1-203ENST00000397442 ESRRBO95718 433 aa26.7■■□□□ 1.86
CPNE1-203ENST00000397442 ERGP11308 486 aa26.7■■□□□ 1.86
CPNE1-203ENST00000397442 MTHFD1P11586 935 aaKnown RBP26.7■■□□□ 1.86
CPNE1-203ENST00000397442 FOXA1P55317 472 aa26.7■■□□□ 1.86
CPNE1-203ENST00000397442 TRAF3Q13114 568 aa26.7■■□□□ 1.86
CPNE1-203ENST00000397442 NAE1Q13564 534 aa26.7■■□□□ 1.86
CPNE1-203ENST00000397442 LMNTD1Q8N9Z9 388 aa26.7■■□□□ 1.86
CPNE1-203ENST00000397442 MAPK15Q8TD08 544 aa26.7■■□□□ 1.86
CPNE1-203ENST00000397442 SKA1Q96BD8 255 aa26.7■■□□□ 1.86
CPNE1-203ENST00000397442 TMEM120AQ9BXJ8 343 aa26.7■■□□□ 1.86
CPNE1-203ENST00000397442 KCNK4Q9NYG8 393 aa26.7■■□□□ 1.86
CPNE1-203ENST00000397442 TDRKHQ9Y2W6 561 aaKnown RBP26.7■■□□□ 1.86
CPNE1-203ENST00000397442 PRAMEF33A0A0G2JMD5 474 aa26.69■■□□□ 1.86
CPNE1-203ENST00000397442 F3P13726 295 aa26.69■■□□□ 1.86
CPNE1-203ENST00000397442 EPB42P16452 691 aa26.69■■□□□ 1.86
CPNE1-203ENST00000397442 HALP42357 657 aa26.69■■□□□ 1.86
CPNE1-203ENST00000397442 HK2P52789 917 aa26.69■■□□□ 1.86
CPNE1-203ENST00000397442 ERVPABLB-1P60509 514 aa26.69■■□□□ 1.86
CPNE1-203ENST00000397442 UGT3A2Q3SY77 523 aa26.69■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms