RNA–Protein interactions for RNA: ENST00000396610.6

CMC1-202, Transcript of C-X9-C motif containing 1, humanhuman

TSL 2

Gene CMC1, Length 593 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-202ENST00000396610 PRAC1Q96KF2 57 aa3.72□□□□□ -1.81
CMC1-202ENST00000396610 LINC00615Q96LM1 132 aaPredicted RBP3.72□□□□□ -1.81
CMC1-202ENST00000396610 SFXN2Q96NB2 322 aa3.72□□□□□ -1.81
CMC1-202ENST00000396610 FNBP1Q96RU3 617 aa3.72□□□□□ -1.81
CMC1-202ENST00000396610 NUP85Q9BW27 656 aa3.72□□□□□ -1.81
CMC1-202ENST00000396610 BARHL1Q9BZE3 327 aa3.72□□□□□ -1.81
CMC1-202ENST00000396610 CNOT10Q9H9A5 744 aaKnown RBP3.72□□□□□ -1.81
CMC1-202ENST00000396610 SDR39U1Q9NRG7 319 aaPredicted RBP3.72□□□□□ -1.81
CMC1-202ENST00000396610 GKN1Q9NS71 199 aa3.72□□□□□ -1.81
CMC1-202ENST00000396610 C2orf42Q9NWW7 574 aa3.72□□□□□ -1.81
CMC1-202ENST00000396610 SLC24A2Q9UI40 661 aa3.72□□□□□ -1.81
CMC1-202ENST00000396610 PADI2Q9Y2J8 665 aa3.72□□□□□ -1.81
CMC1-202ENST00000396610 KIAA1210Q9ULL0 1709 aa3.71□□□□□ -1.82
CMC1-202ENST00000396610 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.71□□□□□ -1.82
CMC1-202ENST00000396610 TRIM77I1YAP6 450 aa3.71□□□□□ -1.82
CMC1-202ENST00000396610 SPRY1O43609 319 aaPredicted RBP3.71□□□□□ -1.82
CMC1-202ENST00000396610 HAPLN1P10915 354 aaPredicted RBP3.71□□□□□ -1.82
CMC1-202ENST00000396610 HSPA8P11142 646 aaKnown RBP3.71□□□□□ -1.82
CMC1-202ENST00000396610 CEACAM1P13688 526 aa3.71□□□□□ -1.82
CMC1-202ENST00000396610 JAK1P23458 1154 aa3.71□□□□□ -1.82
CMC1-202ENST00000396610 MC5RP33032 325 aa3.71□□□□□ -1.82
CMC1-202ENST00000396610 MTHFRP42898 656 aa3.71□□□□□ -1.82
CMC1-202ENST00000396610 MAT1AQ00266 395 aaKnown RBP3.71□□□□□ -1.82
CMC1-202ENST00000396610 ZNF415Q09FC8 603 aa3.71□□□□□ -1.82
CMC1-202ENST00000396610 ALCAMQ13740 583 aa3.71□□□□□ -1.82
CMC1-202ENST00000396610 RRS1Q15050 365 aaKnown RBP3.71□□□□□ -1.82
CMC1-202ENST00000396610 TAF13Q15543 124 aa3.71□□□□□ -1.82
CMC1-202ENST00000396610 ITPRIPL2Q3MIP1 535 aa3.71□□□□□ -1.82
CMC1-202ENST00000396610 C9orf152Q5JTZ5 239 aa3.71□□□□□ -1.82
CMC1-202ENST00000396610 NAA16Q6N069 864 aaPredicted RBP3.71□□□□□ -1.82
CMC1-202ENST00000396610 TMED8Q6PL24 325 aaPredicted RBP3.71□□□□□ -1.82
CMC1-202ENST00000396610 ARHGAP22Q7Z5H3 698 aa3.71□□□□□ -1.82
CMC1-202ENST00000396610 CDK20Q8IZL9 346 aa3.71□□□□□ -1.82
CMC1-202ENST00000396610 WDSUB1Q8N9V3 476 aa3.71□□□□□ -1.82
CMC1-202ENST00000396610 KCTD6Q8NC69 237 aa3.71□□□□□ -1.82
CMC1-202ENST00000396610 ADAD2Q8NCV1 583 aaKnown RBP3.71□□□□□ -1.82
CMC1-202ENST00000396610 ZNF248Q8NDW4 579 aa3.71□□□□□ -1.82
CMC1-202ENST00000396610 OR4C3Q8NH37 302 aa3.71□□□□□ -1.82
CMC1-202ENST00000396610 SECISBP2LQ93073 1101 aaKnown RBP3.71□□□□□ -1.82
CMC1-202ENST00000396610 DHX58Q96C10 678 aa3.71□□□□□ -1.82
CMC1-202ENST00000396610 GIMAP5Q96F15 307 aa3.71□□□□□ -1.82
CMC1-202ENST00000396610 SEPHS2Q99611 448 aa3.71□□□□□ -1.82
CMC1-202ENST00000396610 GPR88Q9GZN0 384 aa3.71□□□□□ -1.82
CMC1-202ENST00000396610 MYNNQ9NPC7 610 aa3.71□□□□□ -1.82
CMC1-202ENST00000396610 INTS9Q9NV88 658 aaKnown RBP3.71□□□□□ -1.82
CMC1-202ENST00000396610 FLRT3Q9NZU0 649 aa3.71□□□□□ -1.82
CMC1-202ENST00000396610 SWAP70Q9UH65 585 aa3.71□□□□□ -1.82
CMC1-202ENST00000396610 DDX25Q9UHL0 483 aaKnown RBP3.71□□□□□ -1.82
CMC1-202ENST00000396610 RNF150Q9ULK6 438 aa3.71□□□□□ -1.82
CMC1-202ENST00000396610 ABT1Q9ULW3 272 aaKnown RBP3.71□□□□□ -1.82
CMC1-202ENST00000396610 TCRBV21S2A2A0A5A6 115 aa3.7□□□□□ -1.82
CMC1-202ENST00000396610 CDC123O75794 336 aaPredicted RBP3.7□□□□□ -1.82
CMC1-202ENST00000396610 SLCO2B1O94956 709 aa3.7□□□□□ -1.82
CMC1-202ENST00000396610 HMBSP08397 361 aa3.7□□□□□ -1.82
CMC1-202ENST00000396610 RAB40ALP0C0E4 278 aa3.7□□□□□ -1.82
CMC1-202ENST00000396610 SMIM18P0DKX4 95 aa3.7□□□□□ -1.82
CMC1-202ENST00000396610 CYP11B2P19099 503 aa3.7□□□□□ -1.82
CMC1-202ENST00000396610 MNDAP41218 407 aa3.7□□□□□ -1.82
CMC1-202ENST00000396610 NKX2-1P43699 371 aaPredicted RBP3.7□□□□□ -1.82
CMC1-202ENST00000396610 ZNF75DP51815 510 aa3.7□□□□□ -1.82
CMC1-202ENST00000396610 KCNJ10P78508 379 aa3.7□□□□□ -1.82
CMC1-202ENST00000396610 CDR2Q01850 454 aa3.7□□□□□ -1.82
CMC1-202ENST00000396610 CALD1Q05682 793 aaKnown RBP3.7□□□□□ -1.82
CMC1-202ENST00000396610 CA9Q16790 459 aa3.7□□□□□ -1.82
CMC1-202ENST00000396610 SYT14P1Q58G82 188 aa3.7□□□□□ -1.82
CMC1-202ENST00000396610 CYP4A22Q5TCH4 519 aa3.7□□□□□ -1.82
CMC1-202ENST00000396610 MFSD4BQ5TF39 518 aa3.7□□□□□ -1.82
CMC1-202ENST00000396610 CENPVQ7Z7K6 275 aaPredicted RBP3.7□□□□□ -1.82
CMC1-202ENST00000396610 RTN4RL2Q86UN3 420 aa3.7□□□□□ -1.82
CMC1-202ENST00000396610 PIGZQ86VD9 579 aa3.7□□□□□ -1.82
CMC1-202ENST00000396610 NOL11Q9H8H0 719 aaKnown RBP3.7□□□□□ -1.82
CMC1-202ENST00000396610 SPHK1Q9NYA1 384 aa3.7□□□□□ -1.82
CMC1-202ENST00000396610 STK26Q9P289 416 aa3.7□□□□□ -1.82
CMC1-202ENST00000396610 CACNG5Q9UF02 275 aa3.7□□□□□ -1.82
CMC1-202ENST00000396610 MRPS28Q9Y2Q9 187 aaKnown RBP3.7□□□□□ -1.82
CMC1-202ENST00000396610 TMED3Q9Y3Q3 217 aa3.7□□□□□ -1.82
CMC1-202ENST00000396610 PYGO1Q9Y3Y4 419 aa3.7□□□□□ -1.82
CMC1-202ENST00000396610 A0A087X002 238 aa3.69□□□□□ -1.82
CMC1-202ENST00000396610 EDDM13A0A1B0GTR0 161 aa3.69□□□□□ -1.82
CMC1-202ENST00000396610 ANKRD61A6NGH8 418 aa3.69□□□□□ -1.82
CMC1-202ENST00000396610 UBE2CO00762 179 aa3.69□□□□□ -1.82
CMC1-202ENST00000396610 TADA2AO75478 443 aa3.69□□□□□ -1.82
CMC1-202ENST00000396610 EML2O95834 649 aa3.69□□□□□ -1.82
CMC1-202ENST00000396610 EDN1P05305 212 aa3.69□□□□□ -1.82
CMC1-202ENST00000396610 GPIP06744 558 aa3.69□□□□□ -1.82
CMC1-202ENST00000396610 IGHV4-31P0DP07 118 aa3.69□□□□□ -1.82
CMC1-202ENST00000396610 CPT2P23786 658 aa3.69□□□□□ -1.82
CMC1-202ENST00000396610 CAPZA2P47755 286 aa3.69□□□□□ -1.82
CMC1-202ENST00000396610 MAPK12P53778 367 aa3.69□□□□□ -1.82
CMC1-202ENST00000396610 CSE1LP55060 971 aaKnown RBP3.69□□□□□ -1.82
CMC1-202ENST00000396610 PMP22Q01453 160 aa3.69□□□□□ -1.82
CMC1-202ENST00000396610 RALGDSQ12967 914 aa3.69□□□□□ -1.82
CMC1-202ENST00000396610 SQLEQ14534 574 aa3.69□□□□□ -1.82
CMC1-202ENST00000396610 CCDC6Q16204 474 aa3.69□□□□□ -1.82
CMC1-202ENST00000396610 ODF4Q2M2E3 257 aa3.69□□□□□ -1.82
CMC1-202ENST00000396610 VWC2Q2TAL6 325 aa3.69□□□□□ -1.82
CMC1-202ENST00000396610 ZFP69Q49AA0 526 aa3.69□□□□□ -1.82
CMC1-202ENST00000396610 C14orf177Q52M58 125 aa3.69□□□□□ -1.82
CMC1-202ENST00000396610 SLC25A53Q5H9E4 307 aa3.69□□□□□ -1.82
CMC1-202ENST00000396610 SLC30A6Q6NXT4 461 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms