RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 TMEM115Q12893 351 aaPredicted RBP14.58□□□□□ -0.08
CBX3-202ENST00000396386 ZXDCQ2QGD7 858 aaPredicted RBP14.58□□□□□ -0.08
CBX3-202ENST00000396386 RABL3Q5HYI8 236 aa14.58□□□□□ -0.08
CBX3-202ENST00000396386 NEK5Q6P3R8 708 aa14.58□□□□□ -0.08
CBX3-202ENST00000396386 TMEM154Q6P9G4 183 aa14.58□□□□□ -0.08
CBX3-202ENST00000396386 TICAM1Q8IUC6 712 aa14.58□□□□□ -0.08
CBX3-202ENST00000396386 KIAA2013Q8IYS2 634 aa14.58□□□□□ -0.08
CBX3-202ENST00000396386 LIX1Q8N485 282 aa14.58□□□□□ -0.08
CBX3-202ENST00000396386 L3MBTL4Q8NA19 623 aa14.58□□□□□ -0.08
CBX3-202ENST00000396386 GOLM1Q8NBJ4 401 aa14.58□□□□□ -0.08
CBX3-202ENST00000396386 GLB1L3Q8NCI6 653 aaPredicted RBP14.58□□□□□ -0.08
CBX3-202ENST00000396386 SELENOMQ8WWX9 145 aa14.58□□□□□ -0.08
CBX3-202ENST00000396386 GATA6Q92908 595 aa14.58□□□□□ -0.08
CBX3-202ENST00000396386 SLCO4A1Q96BD0 722 aa14.58□□□□□ -0.08
CBX3-202ENST00000396386 PYCR2Q96C36 320 aa14.58□□□□□ -0.08
CBX3-202ENST00000396386 UHRF1Q96T88 793 aaPredicted RBP14.58□□□□□ -0.08
CBX3-202ENST00000396386 KCTD14Q9BQ13 255 aaPredicted RBP14.58□□□□□ -0.08
CBX3-202ENST00000396386 ACPTQ9BZG2 426 aa14.58□□□□□ -0.08
CBX3-202ENST00000396386 ZFP14Q9HCL3 533 aa14.58□□□□□ -0.08
CBX3-202ENST00000396386 DYRK4Q9NR20 520 aa14.58□□□□□ -0.08
CBX3-202ENST00000396386 INTS7Q9NVH2 962 aaKnown RBP14.58□□□□□ -0.08
CBX3-202ENST00000396386 ZNHIT2Q9UHR6 403 aa14.58□□□□□ -0.08
CBX3-202ENST00000396386 SCOCQ9UIL1 159 aa14.58□□□□□ -0.08
CBX3-202ENST00000396386 COQ6Q9Y2Z9 468 aa14.58□□□□□ -0.08
CBX3-202ENST00000396386 PRRC2BQ5JSZ5 2229 aaKnown RBP14.58□□□□□ -0.08
CBX3-202ENST00000396386 SLC5A10A0PJK1 596 aa14.57□□□□□ -0.08
CBX3-202ENST00000396386 RSL1D1O76021 490 aaKnown RBP14.57□□□□□ -0.08
CBX3-202ENST00000396386 CAPNS1P04632 268 aa14.57□□□□□ -0.08
CBX3-202ENST00000396386 ITPKAP23677 461 aa14.57□□□□□ -0.08
CBX3-202ENST00000396386 PBLDP30039 288 aaPredicted RBP14.57□□□□□ -0.08
CBX3-202ENST00000396386 PREPP48147 710 aa14.57□□□□□ -0.08
CBX3-202ENST00000396386 MED21Q13503 144 aa14.57□□□□□ -0.08
CBX3-202ENST00000396386 PTGR1Q14914 329 aa14.57□□□□□ -0.08
CBX3-202ENST00000396386 TMEM220Q6QAJ8 160 aa14.57□□□□□ -0.08
CBX3-202ENST00000396386 ATL1Q8WXF7 558 aa14.57□□□□□ -0.08
CBX3-202ENST00000396386 CDCA3Q99618 268 aaPredicted RBP14.57□□□□□ -0.08
CBX3-202ENST00000396386 TRIM8Q9BZR9 551 aa14.57□□□□□ -0.08
CBX3-202ENST00000396386 DPY30Q9C005 99 aa14.57□□□□□ -0.08
CBX3-202ENST00000396386 TMEM245Q9H330 911 aa14.57□□□□□ -0.08
CBX3-202ENST00000396386 Q9H521 79 aa14.57□□□□□ -0.08
CBX3-202ENST00000396386 EGFL7Q9UHF1 273 aa14.57□□□□□ -0.08
CBX3-202ENST00000396386 SNX13Q9Y5W8 968 aa14.57□□□□□ -0.08
CBX3-202ENST00000396386 KRT87PA6NCN2 255 aa14.57□□□□□ -0.08
CBX3-202ENST00000396386 C1QTNF3-AMACRE9PGA6 284 aa14.57□□□□□ -0.08
CBX3-202ENST00000396386 TXNDC9O14530 226 aa14.57□□□□□ -0.08
CBX3-202ENST00000396386 AREL1O15033 823 aa14.57□□□□□ -0.08
CBX3-202ENST00000396386 RECQL5O94762 991 aaPredicted RBP14.57□□□□□ -0.08
CBX3-202ENST00000396386 UBTFL6P0CB48 400 aaPredicted RBP14.57□□□□□ -0.08
CBX3-202ENST00000396386 C6P13671 934 aa14.57□□□□□ -0.08
CBX3-202ENST00000396386 HSPA13P48723 471 aa14.57□□□□□ -0.08
CBX3-202ENST00000396386 DGKQP52824 942 aa14.57□□□□□ -0.08
CBX3-202ENST00000396386 YBX1P67809 324 aaKnown RBP14.57□□□□□ -0.08
CBX3-202ENST00000396386 ABRQ12979 859 aa14.57□□□□□ -0.08
CBX3-202ENST00000396386 KIAA0040Q15053 153 aa14.57□□□□□ -0.08
CBX3-202ENST00000396386 BCL7AQ4VC05 210 aa14.57□□□□□ -0.08
CBX3-202ENST00000396386 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.57□□□□□ -0.08
CBX3-202ENST00000396386 NANOGP8Q6NSW7 305 aa14.57□□□□□ -0.08
CBX3-202ENST00000396386 VITQ6UXI7 678 aa14.57□□□□□ -0.08
CBX3-202ENST00000396386 DSG4Q86SJ6 1040 aa14.57□□□□□ -0.08
CBX3-202ENST00000396386 PTRH1Q86Y79 214 aaKnown RBP14.57□□□□□ -0.08
CBX3-202ENST00000396386 HID1Q8IV36 788 aa14.57□□□□□ -0.08
CBX3-202ENST00000396386 SLC22A15Q8IZD6 547 aa14.57□□□□□ -0.08
CBX3-202ENST00000396386 SLC13A3Q8WWT9 602 aa14.57□□□□□ -0.08
CBX3-202ENST00000396386 SUSD6Q92537 303 aa14.57□□□□□ -0.08
CBX3-202ENST00000396386 FOPNLQ96NB1 174 aa14.57□□□□□ -0.08
CBX3-202ENST00000396386 ATG10Q9H0Y0 220 aa14.57□□□□□ -0.08
CBX3-202ENST00000396386 EPHX3Q9H6B9 360 aa14.57□□□□□ -0.08
CBX3-202ENST00000396386 NANOGQ9H9S0 305 aa14.57□□□□□ -0.08
CBX3-202ENST00000396386 ARMC1Q9NVT9 282 aa14.57□□□□□ -0.08
CBX3-202ENST00000396386 SLC22A14Q9Y267 594 aa14.57□□□□□ -0.08
CBX3-202ENST00000396386 DHRS12A0PJE2 317 aa14.56□□□□□ -0.08
CBX3-202ENST00000396386 UGDHO60701 494 aa14.56□□□□□ -0.08
CBX3-202ENST00000396386 SOD1P00441 154 aa14.56□□□□□ -0.08
CBX3-202ENST00000396386 PRPH2P23942 346 aa14.56□□□□□ -0.08
CBX3-202ENST00000396386 PSMA4P25789 261 aaKnown RBP14.56□□□□□ -0.08
CBX3-202ENST00000396386 PBX2P40425 430 aa14.56□□□□□ -0.08
CBX3-202ENST00000396386 HALP42357 657 aa14.56□□□□□ -0.08
CBX3-202ENST00000396386 BDKRB1P46663 353 aa14.56□□□□□ -0.08
CBX3-202ENST00000396386 PFN3P60673 137 aa14.56□□□□□ -0.08
CBX3-202ENST00000396386 PWP1Q13610 501 aa14.56□□□□□ -0.08
CBX3-202ENST00000396386 SHHQ15465 462 aa14.56□□□□□ -0.08
CBX3-202ENST00000396386 TMEM52BQ4KMG9 183 aa14.56□□□□□ -0.08
CBX3-202ENST00000396386 SLC44A4Q53GD3 710 aa14.56□□□□□ -0.08
CBX3-202ENST00000396386 USP39Q53GS9 565 aaKnown RBP14.56□□□□□ -0.08
CBX3-202ENST00000396386 RAET1GQ6H3X3 334 aa14.56□□□□□ -0.08
CBX3-202ENST00000396386 GPR149Q86SP6 731 aa14.56□□□□□ -0.08
CBX3-202ENST00000396386 SFTPA1Q8IWL2 248 aa14.56□□□□□ -0.08
CBX3-202ENST00000396386 ST13P5Q8NFI4 369 aaPredicted RBP14.56□□□□□ -0.08
CBX3-202ENST00000396386 LRTOMTQ8WZ04 291 aa14.56□□□□□ -0.08
CBX3-202ENST00000396386 MTFMTQ96DP5 389 aaKnown RBP14.56□□□□□ -0.08
CBX3-202ENST00000396386 CCDC138Q96M89 665 aa14.56□□□□□ -0.08
CBX3-202ENST00000396386 TMEM74Q96NL1 305 aa14.56□□□□□ -0.08
CBX3-202ENST00000396386 FAM129BQ96TA1 746 aa14.56□□□□□ -0.08
CBX3-202ENST00000396386 SLAMF8Q9P0V8 285 aa14.56□□□□□ -0.08
CBX3-202ENST00000396386 CNOT11Q9UKZ1 510 aaKnown RBP14.56□□□□□ -0.08
CBX3-202ENST00000396386 A6NHS1 94 aa14.55□□□□□ -0.08
CBX3-202ENST00000396386 PLK4O00444 970 aa14.55□□□□□ -0.08
CBX3-202ENST00000396386 LZTS3O60299 673 aaPredicted RBP14.55□□□□□ -0.08
CBX3-202ENST00000396386 KCNH1O95259 989 aa14.55□□□□□ -0.08
CBX3-202ENST00000396386 LYNP07948 512 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms