RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 IL1R2P27930 398 aa8.26□□□□□ -1.09
NDE1-202ENST00000396355 CDKN2BP42772 138 aa8.26□□□□□ -1.09
NDE1-202ENST00000396355 PGGT1BP53609 377 aa8.26□□□□□ -1.09
NDE1-202ENST00000396355 ITKQ08881 620 aa8.26□□□□□ -1.09
NDE1-202ENST00000396355 GRIK2Q13002 908 aa8.26□□□□□ -1.09
NDE1-202ENST00000396355 CSHL1Q14406 222 aa8.26□□□□□ -1.09
NDE1-202ENST00000396355 ATP6AP1LQ52LC2 224 aa8.26□□□□□ -1.09
NDE1-202ENST00000396355 RNASEH2BQ5TBB1 312 aaKnown RBP8.26□□□□□ -1.09
NDE1-202ENST00000396355 CARM1Q86X55 608 aa8.26□□□□□ -1.09
NDE1-202ENST00000396355 CDYL2Q8N8U2 506 aa8.26□□□□□ -1.09
NDE1-202ENST00000396355 ZNF527Q8NB42 609 aa8.26□□□□□ -1.09
NDE1-202ENST00000396355 TMEM203Q969S6 136 aa8.26□□□□□ -1.09
NDE1-202ENST00000396355 EXOSC8Q96B26 276 aaKnown RBP8.26□□□□□ -1.09
NDE1-202ENST00000396355 SGK3Q96BR1 496 aa8.26□□□□□ -1.09
NDE1-202ENST00000396355 ZNF597Q96LX8 424 aa8.26□□□□□ -1.09
NDE1-202ENST00000396355 NTMT1Q9BV86 223 aa8.26□□□□□ -1.09
NDE1-202ENST00000396355 GATA5Q9BWX5 397 aaPredicted RBP8.26□□□□□ -1.09
NDE1-202ENST00000396355 CD320Q9NPF0 282 aa8.26□□□□□ -1.09
NDE1-202ENST00000396355 ZNF302Q9NR11 478 aa8.26□□□□□ -1.09
NDE1-202ENST00000396355 DCAF16Q9NXF7 216 aa8.26□□□□□ -1.09
NDE1-202ENST00000396355 PAK5Q9P286 719 aa8.26□□□□□ -1.09
NDE1-202ENST00000396355 PCM1Q15154 2024 aa8.26□□□□□ -1.09
NDE1-202ENST00000396355 EVPLQ92817 2033 aa8.26□□□□□ -1.09
NDE1-202ENST00000396355 IGKV6D-21A0A0A0MT36 114 aa8.26□□□□□ -1.09
NDE1-202ENST00000396355 ENPP3O14638 875 aa8.26□□□□□ -1.09
NDE1-202ENST00000396355 SHOXO15266 292 aa8.26□□□□□ -1.09
NDE1-202ENST00000396355 ORC5O43913 435 aa8.26□□□□□ -1.09
NDE1-202ENST00000396355 KCNK2O95069 426 aa8.26□□□□□ -1.09
NDE1-202ENST00000396355 TXNDC12O95881 172 aa8.26□□□□□ -1.09
NDE1-202ENST00000396355 TPH1P17752 444 aa8.26□□□□□ -1.09
NDE1-202ENST00000396355 UBA1P22314 1058 aaKnown RBP8.26□□□□□ -1.09
NDE1-202ENST00000396355 PDHA2P29803 388 aa8.26□□□□□ -1.09
NDE1-202ENST00000396355 BMP8BP34820 402 aa8.26□□□□□ -1.09
NDE1-202ENST00000396355 NPY2RP49146 381 aa8.26□□□□□ -1.09
NDE1-202ENST00000396355 TARBP2Q15633 366 aaKnown RBP8.26□□□□□ -1.09
NDE1-202ENST00000396355 C9orf152Q5JTZ5 239 aa8.26□□□□□ -1.09
NDE1-202ENST00000396355 BRAT1Q6PJG6 821 aa8.26□□□□□ -1.09
NDE1-202ENST00000396355 DEF8Q6ZN54 512 aa8.26□□□□□ -1.09
NDE1-202ENST00000396355 PPP1R13LQ8WUF5 828 aa8.26□□□□□ -1.09
NDE1-202ENST00000396355 MYLPFQ96A32 169 aa8.26□□□□□ -1.09
NDE1-202ENST00000396355 RNFT2Q96EX2 444 aa8.26□□□□□ -1.09
NDE1-202ENST00000396355 PPM1MQ96MI6 270 aa8.26□□□□□ -1.09
NDE1-202ENST00000396355 CCDC115Q96NT0 180 aa8.26□□□□□ -1.09
NDE1-202ENST00000396355 C1QTNF7Q9BXJ2 289 aa8.26□□□□□ -1.09
NDE1-202ENST00000396355 ZNF576Q9H609 170 aa8.26□□□□□ -1.09
NDE1-202ENST00000396355 UNKLQ9H9P5 680 aaKnown RBP8.26□□□□□ -1.09
NDE1-202ENST00000396355 SP110Q9HB58 689 aa8.26□□□□□ -1.09
NDE1-202ENST00000396355 ZNF225Q9UK10 706 aa8.26□□□□□ -1.09
NDE1-202ENST00000396355 DISC1C4P0D8 188 aa8.26□□□□□ -1.09
NDE1-202ENST00000396355 ZNF701M0R085 212 aaPredicted RBP8.26□□□□□ -1.09
NDE1-202ENST00000396355 PLIN3O60664 434 aa8.26□□□□□ -1.09
NDE1-202ENST00000396355 DHFRP00374 187 aa8.26□□□□□ -1.09
NDE1-202ENST00000396355 NTRK1P04629 796 aa8.26□□□□□ -1.09
NDE1-202ENST00000396355 DNAJB2P25686 324 aa8.26□□□□□ -1.09
NDE1-202ENST00000396355 MGAT1P26572 445 aa8.26□□□□□ -1.09
NDE1-202ENST00000396355 GRIK1P39086 918 aa8.26□□□□□ -1.09
NDE1-202ENST00000396355 PPIGQ13427 754 aaKnown RBP eCLIP8.26□□□□□ -1.092e-7■□□□□ 10.4
NDE1-202ENST00000396355 SGO1Q5FBB7 561 aa8.26□□□□□ -1.09
NDE1-202ENST00000396355 REP15Q6BDI9 236 aa8.26□□□□□ -1.09
NDE1-202ENST00000396355 DENND1CQ8IV53 801 aa8.26□□□□□ -1.09
NDE1-202ENST00000396355 IGDCC3Q8IVU1 814 aa8.26□□□□□ -1.09
NDE1-202ENST00000396355 ADGRF2Q8IZF7 708 aa8.26□□□□□ -1.09
NDE1-202ENST00000396355 SETD9Q8NE22 299 aa8.26□□□□□ -1.09
NDE1-202ENST00000396355 TSNAXQ99598 290 aaKnown RBP8.26□□□□□ -1.09
NDE1-202ENST00000396355 ADPGKQ9BRR6 497 aa8.26□□□□□ -1.09
NDE1-202ENST00000396355 ACAD9Q9H845 621 aa8.26□□□□□ -1.09
NDE1-202ENST00000396355 CISHQ9NSE2 258 aa8.26□□□□□ -1.09
NDE1-202ENST00000396355 UBP1Q9NZI7 540 aa8.26□□□□□ -1.09
NDE1-202ENST00000396355 SLC12A8A0AV02 714 aa8.25□□□□□ -1.09
NDE1-202ENST00000396355 M0QZ92 97 aa8.25□□□□□ -1.09
NDE1-202ENST00000396355 TGM1P22735 817 aa8.25□□□□□ -1.09
NDE1-202ENST00000396355 TIE1P35590 1138 aa8.25□□□□□ -1.09
NDE1-202ENST00000396355 GRIA1P42261 906 aa8.25□□□□□ -1.09
NDE1-202ENST00000396355 ASPAP45381 313 aa8.25□□□□□ -1.09
NDE1-202ENST00000396355 NR2C2P49116 596 aa8.25□□□□□ -1.09
NDE1-202ENST00000396355 NUMBP49757 651 aa8.25□□□□□ -1.09
NDE1-202ENST00000396355 RPP30P78346 268 aaKnown RBP8.25□□□□□ -1.09
NDE1-202ENST00000396355 IFITM3Q01628 133 aa8.25□□□□□ -1.09
NDE1-202ENST00000396355 SLC25A11Q02978 314 aaKnown RBP8.25□□□□□ -1.09
NDE1-202ENST00000396355 CDH18Q13634 790 aa8.25□□□□□ -1.09
NDE1-202ENST00000396355 TIGD6Q17RP2 521 aa8.25□□□□□ -1.09
NDE1-202ENST00000396355 ZNF648Q5T619 568 aaPredicted RBP8.25□□□□□ -1.09
NDE1-202ENST00000396355 FAM102AQ5T9C2 384 aaPredicted RBP8.25□□□□□ -1.09
NDE1-202ENST00000396355 METTL11BQ5VVY1 283 aa8.25□□□□□ -1.09
NDE1-202ENST00000396355 ELP2Q6IA86 826 aa8.25□□□□□ -1.09
NDE1-202ENST00000396355 TMEM88Q6PEY1 159 aa8.25□□□□□ -1.09
NDE1-202ENST00000396355 TIPARPQ7Z3E1 657 aaKnown RBP8.25□□□□□ -1.09
NDE1-202ENST00000396355 CENPLQ8N0S6 344 aaPredicted RBP8.25□□□□□ -1.09
NDE1-202ENST00000396355 PARP16Q8N5Y8 322 aa8.25□□□□□ -1.09
NDE1-202ENST00000396355 JOSD2Q8TAC2 188 aa8.25□□□□□ -1.09
NDE1-202ENST00000396355 TRMT10AQ8TBZ6 339 aaKnown RBP8.25□□□□□ -1.09
NDE1-202ENST00000396355 URGCPQ8TCY9 931 aa8.25□□□□□ -1.09
NDE1-202ENST00000396355 RXFP2Q8WXD0 754 aa8.25□□□□□ -1.09
NDE1-202ENST00000396355 ARL5BQ96KC2 179 aa8.25□□□□□ -1.09
NDE1-202ENST00000396355 ACE2Q9BYF1 805 aaPredicted RBP8.25□□□□□ -1.09
NDE1-202ENST00000396355 XYLT2Q9H1B5 865 aa8.25□□□□□ -1.09
NDE1-202ENST00000396355 C2orf40Q9H1Z8 148 aa8.25□□□□□ -1.09
NDE1-202ENST00000396355 ELAC1Q9H777 363 aaKnown RBP8.25□□□□□ -1.09
NDE1-202ENST00000396355 FARP1Q9Y4F1 1045 aaPredicted RBP8.25□□□□□ -1.09
NDE1-202ENST00000396355 MYO18AQ92614 2054 aaKnown RBP8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms