RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 MAPK10P53779 464 aa16.04■□□□□ 0.16
CXCL1-201ENST00000395761 EFTUD2Q15029 972 aaKnown RBP eCLIP16.04■□□□□ 0.16
CXCL1-201ENST00000395761 UGT3A1Q6NUS8 523 aa16.04■□□□□ 0.16
CXCL1-201ENST00000395761 NEK10Q6ZWH5 1172 aa16.04■□□□□ 0.16
CXCL1-201ENST00000395761 PRSS42Q7Z5A4 293 aa16.04■□□□□ 0.16
CXCL1-201ENST00000395761 CTAGE3PQ8IX95 158 aa16.04■□□□□ 0.16
CXCL1-201ENST00000395761 C2orf73Q8N5S3 287 aaPredicted RBP16.04■□□□□ 0.16
CXCL1-201ENST00000395761 PPM1NQ8N819 430 aa16.04■□□□□ 0.16
CXCL1-201ENST00000395761 CDKL2Q92772 493 aa16.04■□□□□ 0.16
CXCL1-201ENST00000395761 PMEPA1Q969W9 287 aa16.04■□□□□ 0.16
CXCL1-201ENST00000395761 EPB41L4BQ9H329 900 aa16.04■□□□□ 0.16
CXCL1-201ENST00000395761 RHOJQ9H4E5 214 aa16.04■□□□□ 0.16
CXCL1-201ENST00000395761 ARGLU1Q9NWB6 273 aaPredicted RBP16.04■□□□□ 0.16
CXCL1-201ENST00000395761 SPHK1Q9NYA1 384 aa16.04■□□□□ 0.16
CXCL1-201ENST00000395761 AKAP7Q9P0M2 348 aaPredicted RBP16.04■□□□□ 0.16
CXCL1-201ENST00000395761 CORO1CQ9ULV4 474 aaPredicted RBP16.04■□□□□ 0.16
CXCL1-201ENST00000395761 MTO1Q9Y2Z2 717 aaKnown RBP16.04■□□□□ 0.16
CXCL1-201ENST00000395761 TOX3O15405 576 aaPredicted RBP16.03■□□□□ 0.16
CXCL1-201ENST00000395761 PSIP1O75475 530 aaKnown RBP16.03■□□□□ 0.16
CXCL1-201ENST00000395761 FAM155BO75949 473 aa16.03■□□□□ 0.16
CXCL1-201ENST00000395761 DXOO77932 396 aaKnown RBP16.03■□□□□ 0.16
CXCL1-201ENST00000395761 CHRM5P08912 532 aaPredicted RBP16.03■□□□□ 0.16
CXCL1-201ENST00000395761 MPC1LP0DKB6 136 aa16.03■□□□□ 0.16
CXCL1-201ENST00000395761 CBSLP0DN79 551 aa16.03■□□□□ 0.16
CXCL1-201ENST00000395761 ENO3P13929 434 aaPredicted RBP16.03■□□□□ 0.16
CXCL1-201ENST00000395761 PRDX3P30048 256 aaKnown RBP16.03■□□□□ 0.16
CXCL1-201ENST00000395761 PKLRP30613 574 aa16.03■□□□□ 0.16
CXCL1-201ENST00000395761 STX2P32856 288 aa16.03■□□□□ 0.16
CXCL1-201ENST00000395761 CBSP35520 551 aa16.03■□□□□ 0.16
CXCL1-201ENST00000395761 PRKAA1Q13131 559 aa16.03■□□□□ 0.16
CXCL1-201ENST00000395761 PDAP1Q13442 181 aaKnown RBP16.03■□□□□ 0.16
CXCL1-201ENST00000395761 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.03■□□□□ 0.16
CXCL1-201ENST00000395761 FAM45BPQ6NSW5 357 aa16.03■□□□□ 0.16
CXCL1-201ENST00000395761 IGF2-ASQ6U949 168 aa16.03■□□□□ 0.16
CXCL1-201ENST00000395761 TMEM207Q6UWW9 146 aa16.03■□□□□ 0.16
CXCL1-201ENST00000395761 FAM129CQ86XR2 697 aa16.03■□□□□ 0.16
CXCL1-201ENST00000395761 LSMEM2Q8N112 164 aa16.03■□□□□ 0.16
CXCL1-201ENST00000395761 BMPERQ8N8U9 685 aa16.03■□□□□ 0.16
CXCL1-201ENST00000395761 LINC01555Q8NAE3 123 aa16.03■□□□□ 0.16
CXCL1-201ENST00000395761 KDF1Q8NAX2 398 aaPredicted RBP16.03■□□□□ 0.16
CXCL1-201ENST00000395761 FAM45AQ8TCE6 357 aa16.03■□□□□ 0.16
CXCL1-201ENST00000395761 ASB11Q8WXH4 323 aa16.03■□□□□ 0.16
CXCL1-201ENST00000395761 ZCCHC14Q8WYQ9 949 aaKnown RBP16.03■□□□□ 0.16
CXCL1-201ENST00000395761 KLHL6Q8WZ60 621 aa16.03■□□□□ 0.16
CXCL1-201ENST00000395761 USP7Q93009 1102 aa16.03■□□□□ 0.16
CXCL1-201ENST00000395761 RAD51AP1Q96B01 352 aa16.03■□□□□ 0.16
CXCL1-201ENST00000395761 VPS39Q96JC1 886 aa16.03■□□□□ 0.16
CXCL1-201ENST00000395761 CPNE1Q99829 537 aa16.03■□□□□ 0.16
CXCL1-201ENST00000395761 ACTR10Q9NZ32 417 aa16.03■□□□□ 0.16
CXCL1-201ENST00000395761 SEMA5BQ9P283 1151 aa16.03■□□□□ 0.16
CXCL1-201ENST00000395761 DKK4Q9UBT3 224 aa16.03■□□□□ 0.16
CXCL1-201ENST00000395761 POMT2Q9UKY4 750 aa16.03■□□□□ 0.16
CXCL1-201ENST00000395761 TPRP12270 2363 aaKnown RBP16.02■□□□□ 0.16
CXCL1-201ENST00000395761 TLCD2A6NGC4 264 aa16.02■□□□□ 0.16
CXCL1-201ENST00000395761 CDRT15L2A8MXV6 281 aa16.02■□□□□ 0.16
CXCL1-201ENST00000395761 GFYI3L273 518 aa16.02■□□□□ 0.16
CXCL1-201ENST00000395761 TLX3O43711 291 aaPredicted RBP16.02■□□□□ 0.16
CXCL1-201ENST00000395761 ACSL3O95573 720 aa16.02■□□□□ 0.16
CXCL1-201ENST00000395761 TSPAN12O95859 305 aa16.02■□□□□ 0.16
CXCL1-201ENST00000395761 ITGA2BP08514 1039 aa16.02■□□□□ 0.16
CXCL1-201ENST00000395761 PEBP1P30086 187 aaKnown RBP16.02■□□□□ 0.16
CXCL1-201ENST00000395761 HSD17B3P37058 310 aa16.02■□□□□ 0.16
CXCL1-201ENST00000395761 CCNFP41002 786 aa16.02■□□□□ 0.16
CXCL1-201ENST00000395761 RAB28P51157 221 aa16.02■□□□□ 0.16
CXCL1-201ENST00000395761 TAS2R39P59534 338 aa16.02■□□□□ 0.16
CXCL1-201ENST00000395761 SH3BP2P78314 561 aa16.02■□□□□ 0.16
CXCL1-201ENST00000395761 SLC29A2Q14542 456 aa16.02■□□□□ 0.16
CXCL1-201ENST00000395761 ZNF460Q14592 562 aa16.02■□□□□ 0.16
CXCL1-201ENST00000395761 UAP1Q16222 522 aaPredicted RBP16.02■□□□□ 0.16
CXCL1-201ENST00000395761 TBC1D25Q3MII6 688 aa16.02■□□□□ 0.16
CXCL1-201ENST00000395761 TTC23LQ6PF05 361 aa16.02■□□□□ 0.16
CXCL1-201ENST00000395761 RASGRP3Q8IV61 690 aa16.02■□□□□ 0.16
CXCL1-201ENST00000395761 CEP97Q8IW35 865 aa16.02■□□□□ 0.16
CXCL1-201ENST00000395761 FLVCR1-AS1Q8TAF5 88 aa16.02■□□□□ 0.16
CXCL1-201ENST00000395761 DENND1AQ8TEH3 1009 aa16.02■□□□□ 0.16
CXCL1-201ENST00000395761 DLG3Q92796 817 aa16.02■□□□□ 0.16
CXCL1-201ENST00000395761 LINGO1Q96FE5 620 aa16.02■□□□□ 0.16
CXCL1-201ENST00000395761 OR2A14Q96R47 310 aa16.02■□□□□ 0.16
CXCL1-201ENST00000395761 CD180Q99467 661 aa16.02■□□□□ 0.16
CXCL1-201ENST00000395761 RBBP8Q99708 897 aa16.02■□□□□ 0.16
CXCL1-201ENST00000395761 TWSG1Q9GZX9 223 aa16.02■□□□□ 0.16
CXCL1-201ENST00000395761 ZNF768Q9H5H4 540 aaKnown RBP16.02■□□□□ 0.16
CXCL1-201ENST00000395761 OR6C2Q9NZP2 312 aa16.02■□□□□ 0.16
CXCL1-201ENST00000395761 ADAMTS6Q9UKP5 1117 aa16.02■□□□□ 0.16
CXCL1-201ENST00000395761 WDFY3Q8IZQ1 3526 aa16.01■□□□□ 0.15
CXCL1-201ENST00000395761 A0A087WUV0 522 aaPredicted RBP16.01■□□□□ 0.15
CXCL1-201ENST00000395761 PIPSLA2A3N6 862 aa16.01■□□□□ 0.15
CXCL1-201ENST00000395761 TMEM8BA6NDV4 472 aa16.01■□□□□ 0.15
CXCL1-201ENST00000395761 SLC9B1P1A6NJY1 282 aa16.01■□□□□ 0.15
CXCL1-201ENST00000395761 C2orf74A8MZ97 194 aa16.01■□□□□ 0.15
CXCL1-201ENST00000395761 B4E171 279 aa16.01■□□□□ 0.15
CXCL1-201ENST00000395761 C9orf172C9J069 976 aa16.01■□□□□ 0.15
CXCL1-201ENST00000395761 EIF3FO00303 357 aaPredicted RBP16.01■□□□□ 0.15
CXCL1-201ENST00000395761 MATN2O00339 956 aa16.01■□□□□ 0.15
CXCL1-201ENST00000395761 RASGRF2O14827 1237 aa16.01■□□□□ 0.15
CXCL1-201ENST00000395761 KDM1AO60341 852 aa16.01■□□□□ 0.15
CXCL1-201ENST00000395761 CATP04040 527 aaKnown RBP16.01■□□□□ 0.15
CXCL1-201ENST00000395761 PVRP15151 417 aa16.01■□□□□ 0.15
CXCL1-201ENST00000395761 UGT2B7P16662 529 aa16.01■□□□□ 0.15
CXCL1-201ENST00000395761 NELFEP18615 380 aaKnown RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms