RNA–Protein interactions for RNA: ENST00000395090.5

RTN1-203, Transcript of reticulon 1, humanhuman

TSL 2 BASIC

Gene RTN1, Length 1,609 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-203ENST00000395090 IKZF3Q9UKT9 509 aa11.17□□□□□ -0.62
RTN1-203ENST00000395090 C17orf113A0A1B0GUU1 675 aa11.16□□□□□ -0.62
RTN1-203ENST00000395090 OR2AG2A6NM03 316 aa11.16□□□□□ -0.62
RTN1-203ENST00000395090 NUAK1O60285 661 aa11.16□□□□□ -0.62
RTN1-203ENST00000395090 KERAO60938 352 aa11.16□□□□□ -0.62
RTN1-203ENST00000395090 APBB3O95704 486 aa11.16□□□□□ -0.62
RTN1-203ENST00000395090 FAM107AO95990 144 aa11.16□□□□□ -0.62
RTN1-203ENST00000395090 PCCBP05166 539 aa11.16□□□□□ -0.62
RTN1-203ENST00000395090 ENO3P13929 434 aaPredicted RBP11.16□□□□□ -0.62
RTN1-203ENST00000395090 MTHFD2P13995 350 aa11.16□□□□□ -0.62
RTN1-203ENST00000395090 ZNF8P17098 575 aaPredicted RBP11.16□□□□□ -0.62
RTN1-203ENST00000395090 DRD4P21917 467 aa11.16□□□□□ -0.62
RTN1-203ENST00000395090 ATP5F1P24539 256 aaPredicted RBP11.16□□□□□ -0.62
RTN1-203ENST00000395090 GRK2P25098 689 aa11.16□□□□□ -0.62
RTN1-203ENST00000395090 MAT2AP31153 395 aaKnown RBP11.16□□□□□ -0.62
RTN1-203ENST00000395090 RGS4P49798 205 aa11.16□□□□□ -0.62
RTN1-203ENST00000395090 DNAJB13P59910 316 aa11.16□□□□□ -0.62
RTN1-203ENST00000395090 MTAPQ13126 283 aa11.16□□□□□ -0.62
RTN1-203ENST00000395090 OR4D1Q15615 310 aa11.16□□□□□ -0.62
RTN1-203ENST00000395090 NEK10Q6ZWH5 1172 aa11.16□□□□□ -0.62
RTN1-203ENST00000395090 TRIM74Q86UV6 250 aa11.16□□□□□ -0.62
RTN1-203ENST00000395090 LRRC34Q8IZ02 419 aa11.16□□□□□ -0.62
RTN1-203ENST00000395090 DNAJB8Q8NHS0 232 aa11.16□□□□□ -0.62
RTN1-203ENST00000395090 ASZ1Q8WWH4 475 aa11.16□□□□□ -0.62
RTN1-203ENST00000395090 CCDC126Q96EE4 140 aa11.16□□□□□ -0.62
RTN1-203ENST00000395090 TOE1Q96GM8 510 aaKnown RBP11.16□□□□□ -0.62
RTN1-203ENST00000395090 CCT8L2Q96SF2 557 aa11.16□□□□□ -0.62
RTN1-203ENST00000395090 DUSP23Q9BVJ7 150 aa11.16□□□□□ -0.62
RTN1-203ENST00000395090 WDR26Q9H7D7 661 aa11.16□□□□□ -0.62
RTN1-203ENST00000395090 CDYLQ9Y232 598 aa11.16□□□□□ -0.62
RTN1-203ENST00000395090 DOCK9Q9BZ29 2069 aa11.16□□□□□ -0.62
RTN1-203ENST00000395090 SLC5A10A0PJK1 596 aa11.15□□□□□ -0.62
RTN1-203ENST00000395090 CDC7O00311 574 aa11.15□□□□□ -0.62
RTN1-203ENST00000395090 SLC31A1O15431 190 aa11.15□□□□□ -0.62
RTN1-203ENST00000395090 KLK8O60259 260 aa11.15□□□□□ -0.62
RTN1-203ENST00000395090 EDF1O60869 148 aaKnown RBP11.15□□□□□ -0.62
RTN1-203ENST00000395090 SNNO75324 88 aaPredicted RBP11.15□□□□□ -0.62
RTN1-203ENST00000395090 CLEC3AO75596 197 aa11.15□□□□□ -0.62
RTN1-203ENST00000395090 SERPINE1P05121 402 aa11.15□□□□□ -0.62
RTN1-203ENST00000395090 TPBGLP0DKB5 382 aa11.15□□□□□ -0.62
RTN1-203ENST00000395090 MYCLP1P12525 358 aaPredicted RBP11.15□□□□□ -0.62
RTN1-203ENST00000395090 CD6P30203 668 aa11.15□□□□□ -0.62
RTN1-203ENST00000395090 IGFALSP35858 605 aa11.15□□□□□ -0.62
RTN1-203ENST00000395090 NUDT1P36639 197 aa11.15□□□□□ -0.62
RTN1-203ENST00000395090 MAGEA9P43362 315 aa11.15□□□□□ -0.62
RTN1-203ENST00000395090 NFKB2Q00653 900 aa11.15□□□□□ -0.62
RTN1-203ENST00000395090 SIGLEC14Q08ET2 396 aa11.15□□□□□ -0.62
RTN1-203ENST00000395090 BST1Q10588 318 aa11.15□□□□□ -0.62
RTN1-203ENST00000395090 STX3Q13277 289 aa11.15□□□□□ -0.62
RTN1-203ENST00000395090 TSNQ15631 228 aaKnown RBP11.15□□□□□ -0.62
RTN1-203ENST00000395090 CHI3L2Q15782 390 aa11.15□□□□□ -0.62
RTN1-203ENST00000395090 TMEM31Q5JXX7 168 aa11.15□□□□□ -0.62
RTN1-203ENST00000395090 LIPMQ5VYY2 423 aa11.15□□□□□ -0.62
RTN1-203ENST00000395090 ATG16L1Q676U5 607 aa11.15□□□□□ -0.62
RTN1-203ENST00000395090 C11orf96Q7Z7L8 435 aa11.15□□□□□ -0.62
RTN1-203ENST00000395090 RASGRP3Q8IV61 690 aa11.15□□□□□ -0.62
RTN1-203ENST00000395090 EDAQ92838 391 aa11.15□□□□□ -0.62
RTN1-203ENST00000395090 APOOQ9BUR5 198 aa11.15□□□□□ -0.62
RTN1-203ENST00000395090 PITPNM3Q9BZ71 974 aa11.15□□□□□ -0.62
RTN1-203ENST00000395090 SLCO1B3Q9NPD5 702 aa11.15□□□□□ -0.62
RTN1-203ENST00000395090 PHPT1Q9NRX4 125 aaPredicted RBP11.15□□□□□ -0.62
RTN1-203ENST00000395090 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.15□□□□□ -0.62
RTN1-203ENST00000395090 DLGAP2Q9P1A6 1054 aa11.15□□□□□ -0.62
RTN1-203ENST00000395090 TMEM98Q9Y2Y6 226 aa11.15□□□□□ -0.62
RTN1-203ENST00000395090 OR1A2Q9Y585 309 aa11.15□□□□□ -0.62
RTN1-203ENST00000395090 HS3ST3A1Q9Y663 406 aa11.15□□□□□ -0.62
RTN1-203ENST00000395090 KLHL33A6NCF5 533 aa11.14□□□□□ -0.63
RTN1-203ENST00000395090 TMEM202A6NGA9 273 aa11.14□□□□□ -0.63
RTN1-203ENST00000395090 GFYI3L273 518 aa11.14□□□□□ -0.63
RTN1-203ENST00000395090 BTN3A1O00481 513 aa11.14□□□□□ -0.63
RTN1-203ENST00000395090 H2AFYO75367 372 aaKnown RBP11.14□□□□□ -0.63
RTN1-203ENST00000395090 IPO13O94829 963 aaKnown RBP11.14□□□□□ -0.63
RTN1-203ENST00000395090 IGHV4-34P06331 123 aa11.14□□□□□ -0.63
RTN1-203ENST00000395090 VIMP08670 466 aaKnown RBP11.14□□□□□ -0.63
RTN1-203ENST00000395090 MPC1LP0DKB6 136 aa11.14□□□□□ -0.63
RTN1-203ENST00000395090 NEFHP12036 1026 aa11.14□□□□□ -0.63
RTN1-203ENST00000395090 HNRNPA2B1P22626 353 aaKnown RBP11.14□□□□□ -0.63
RTN1-203ENST00000395090 HOXA6P31267 233 aa11.14□□□□□ -0.63
RTN1-203ENST00000395090 CXCL12P48061 93 aa11.14□□□□□ -0.63
RTN1-203ENST00000395090 PLOD1Q02809 727 aaPredicted RBP11.14□□□□□ -0.63
RTN1-203ENST00000395090 HSPA14Q0VDF9 509 aa11.14□□□□□ -0.63
RTN1-203ENST00000395090 KIAA0895LQ68EN5 471 aa11.14□□□□□ -0.63
RTN1-203ENST00000395090 SBSNQ6UWP8 590 aa11.14□□□□□ -0.63
RTN1-203ENST00000395090 C6orf15Q6UXA7 325 aaPredicted RBP11.14□□□□□ -0.63
RTN1-203ENST00000395090 NAPRTQ6XQN6 538 aa11.14□□□□□ -0.63
RTN1-203ENST00000395090 PIWIL4Q7Z3Z4 852 aaKnown RBP11.14□□□□□ -0.63
RTN1-203ENST00000395090 CDH24Q86UP0 819 aa11.14□□□□□ -0.63
RTN1-203ENST00000395090 SLC22A9Q8IVM8 553 aa11.14□□□□□ -0.63
RTN1-203ENST00000395090 MYO1HQ8N1T3 1032 aa11.14□□□□□ -0.63
RTN1-203ENST00000395090 TMEM145Q8NBT3 493 aa11.14□□□□□ -0.63
RTN1-203ENST00000395090 ASB11Q8WXH4 323 aa11.14□□□□□ -0.63
RTN1-203ENST00000395090 BMFQ96LC9 184 aa11.14□□□□□ -0.63
RTN1-203ENST00000395090 GATA5Q9BWX5 397 aaPredicted RBP11.14□□□□□ -0.63
RTN1-203ENST00000395090 C6orf106Q9H6K1 298 aaPredicted RBP11.14□□□□□ -0.63
RTN1-203ENST00000395090 RMI1Q9H9A7 625 aa11.14□□□□□ -0.63
RTN1-203ENST00000395090 EBF2Q9HAK2 575 aa11.14□□□□□ -0.63
RTN1-203ENST00000395090 THAP1Q9NVV9 213 aa11.14□□□□□ -0.63
RTN1-203ENST00000395090 SUCOQ9UBS9 1254 aaKnown RBP11.14□□□□□ -0.63
RTN1-203ENST00000395090 SLC17A4Q9Y2C5 497 aa11.14□□□□□ -0.63
RTN1-203ENST00000395090 IGHV1OR15-9A0A0B4J2B8 117 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms