RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 CDC42P60953 191 aa11.42□□□□□ -0.58
UBE2D3-209ENST00000394804 ST8SIA6P61647 398 aa11.42□□□□□ -0.58
UBE2D3-209ENST00000394804 CNTN1Q12860 1018 aa11.42□□□□□ -0.58
UBE2D3-209ENST00000394804 BTG3Q14201 252 aaPredicted RBP11.42□□□□□ -0.58
UBE2D3-209ENST00000394804 TYSND1Q2T9J0 566 aa11.42□□□□□ -0.58
UBE2D3-209ENST00000394804 GPR33Q49SQ1 333 aa11.42□□□□□ -0.58
UBE2D3-209ENST00000394804 ANXA8L1Q5VT79 327 aa11.42□□□□□ -0.58
UBE2D3-209ENST00000394804 PHACTR4Q8IZ21 702 aa11.42□□□□□ -0.58
UBE2D3-209ENST00000394804 PROX1Q92786 737 aa11.42□□□□□ -0.58
UBE2D3-209ENST00000394804 MGME1Q9BQP7 344 aa11.42□□□□□ -0.58
UBE2D3-209ENST00000394804 TRIM17Q9Y577 477 aa11.42□□□□□ -0.58
UBE2D3-209ENST00000394804 MAGEB17A8MXT2 336 aa11.42□□□□□ -0.58
UBE2D3-209ENST00000394804 BOLA2-SMG1P6H3BVE0 249 aa11.42□□□□□ -0.58
UBE2D3-209ENST00000394804 ITGA2P17301 1181 aa11.42□□□□□ -0.58
UBE2D3-209ENST00000394804 GSTM2P28161 218 aa11.42□□□□□ -0.58
UBE2D3-209ENST00000394804 BCAP31P51572 246 aa11.42□□□□□ -0.58
UBE2D3-209ENST00000394804 SPIBQ01892 262 aa11.42□□□□□ -0.58
UBE2D3-209ENST00000394804 SRSF11Q05519 484 aaKnown RBP11.42□□□□□ -0.58
UBE2D3-209ENST00000394804 C1DQ13901 141 aaKnown RBP11.42□□□□□ -0.58
UBE2D3-209ENST00000394804 SLC14A2Q15849 920 aa11.42□□□□□ -0.58
UBE2D3-209ENST00000394804 ARMCX4Q5H9R4 360 aa11.42□□□□□ -0.58
UBE2D3-209ENST00000394804 CPTPQ5TA50 214 aa11.42□□□□□ -0.58
UBE2D3-209ENST00000394804 LETMD1Q6P1Q0 360 aa11.42□□□□□ -0.58
UBE2D3-209ENST00000394804 PRSS55Q6UWB4 352 aaPredicted RBP11.42□□□□□ -0.58
UBE2D3-209ENST00000394804 TMEM207Q6UWW9 146 aa11.42□□□□□ -0.58
UBE2D3-209ENST00000394804 RBM12BQ8IXT5 1001 aaKnown RBP11.42□□□□□ -0.58
UBE2D3-209ENST00000394804 MINDY2Q8NBR6 621 aa11.42□□□□□ -0.58
UBE2D3-209ENST00000394804 GPR156Q8NFN8 814 aa11.42□□□□□ -0.58
UBE2D3-209ENST00000394804 CLP1Q92989 425 aaKnown RBP11.42□□□□□ -0.58
UBE2D3-209ENST00000394804 DACT3Q96B18 629 aaPredicted RBP11.42□□□□□ -0.58
UBE2D3-209ENST00000394804 SLC39A13Q96H72 371 aa11.42□□□□□ -0.58
UBE2D3-209ENST00000394804 RTP3Q9BQQ7 232 aa11.42□□□□□ -0.58
UBE2D3-209ENST00000394804 SLC2A11Q9BYW1 496 aa11.42□□□□□ -0.58
UBE2D3-209ENST00000394804 BRD9Q9H8M2 597 aa11.42□□□□□ -0.58
UBE2D3-209ENST00000394804 HEMK1Q9Y5R4 338 aaPredicted RBP11.42□□□□□ -0.58
UBE2D3-209ENST00000394804 MYADML2A6NDP7 307 aa11.42□□□□□ -0.58
UBE2D3-209ENST00000394804 CCNDBP1O95273 360 aa11.42□□□□□ -0.58
UBE2D3-209ENST00000394804 CYP2A6P11509 494 aaPredicted RBP11.42□□□□□ -0.58
UBE2D3-209ENST00000394804 MVKQ03426 396 aa11.42□□□□□ -0.58
UBE2D3-209ENST00000394804 CHIT1Q13231 466 aa11.42□□□□□ -0.58
UBE2D3-209ENST00000394804 ABRAXAS2Q15018 415 aa11.42□□□□□ -0.58
UBE2D3-209ENST00000394804 ARMC4Q5T2S8 1044 aa11.42□□□□□ -0.58
UBE2D3-209ENST00000394804 CHST9Q7L1S5 443 aa11.42□□□□□ -0.58
UBE2D3-209ENST00000394804 LIMS2Q7Z4I7 341 aa11.42□□□□□ -0.58
UBE2D3-209ENST00000394804 DDX53Q86TM3 631 aaKnown RBP11.42□□□□□ -0.58
UBE2D3-209ENST00000394804 CYP4Z1Q86W10 505 aa11.42□□□□□ -0.58
UBE2D3-209ENST00000394804 TMEM151AQ8N4L1 468 aa11.42□□□□□ -0.58
UBE2D3-209ENST00000394804 TSEN34Q9BSV6 310 aaKnown RBP11.42□□□□□ -0.58
UBE2D3-209ENST00000394804 CD244Q9BZW8 370 aa11.42□□□□□ -0.58
UBE2D3-209ENST00000394804 ATG10Q9H0Y0 220 aa11.42□□□□□ -0.58
UBE2D3-209ENST00000394804 SLC32A1Q9H598 525 aa11.42□□□□□ -0.58
UBE2D3-209ENST00000394804 TMEM165Q9HC07 324 aa11.42□□□□□ -0.58
UBE2D3-209ENST00000394804 DNAJA1P31689 397 aaKnown RBP11.42□□□□□ -0.58
UBE2D3-209ENST00000394804 GRK3P35626 688 aa11.42□□□□□ -0.58
UBE2D3-209ENST00000394804 IST1P53990 364 aa11.42□□□□□ -0.58
UBE2D3-209ENST00000394804 USP39Q53GS9 565 aaKnown RBP11.42□□□□□ -0.58
UBE2D3-209ENST00000394804 ATG9BQ674R7 924 aa11.42□□□□□ -0.58
UBE2D3-209ENST00000394804 CES5AQ6NT32 575 aa11.42□□□□□ -0.58
UBE2D3-209ENST00000394804 KRT73Q86Y46 540 aa11.42□□□□□ -0.58
UBE2D3-209ENST00000394804 FBXO22Q8NEZ5 403 aa11.42□□□□□ -0.58
UBE2D3-209ENST00000394804 ZNF347Q96SE7 839 aa11.42□□□□□ -0.58
UBE2D3-209ENST00000394804 EBPLQ9BY08 206 aa11.42□□□□□ -0.58
UBE2D3-209ENST00000394804 AASDHPPTQ9NRN7 309 aa11.42□□□□□ -0.58
UBE2D3-209ENST00000394804 RAPGEFL1Q9UHV5 662 aa11.42□□□□□ -0.58
UBE2D3-209ENST00000394804 TRPM7Q96QT4 1865 aa11.42□□□□□ -0.58
UBE2D3-209ENST00000394804 LINC00854A0A1B0GVQ3 168 aa11.41□□□□□ -0.58
UBE2D3-209ENST00000394804 FAM220BPB1ANY3 271 aa11.41□□□□□ -0.58
UBE2D3-209ENST00000394804 AIREO43918 545 aa11.41□□□□□ -0.58
UBE2D3-209ENST00000394804 ATP6V1E1P36543 226 aa11.41□□□□□ -0.58
UBE2D3-209ENST00000394804 ASMTP46597 345 aa11.41□□□□□ -0.58
UBE2D3-209ENST00000394804 CDKN1CP49918 316 aaPredicted RBP11.41□□□□□ -0.58
UBE2D3-209ENST00000394804 GABARAPL2P60520 117 aa11.41□□□□□ -0.58
UBE2D3-209ENST00000394804 OLR1P78380 273 aa11.41□□□□□ -0.58
UBE2D3-209ENST00000394804 TEX26Q8N6G2 289 aa11.41□□□□□ -0.58
UBE2D3-209ENST00000394804 OR10Q1Q8NGQ4 319 aa11.41□□□□□ -0.58
UBE2D3-209ENST00000394804 CD200R1Q8TD46 325 aa11.41□□□□□ -0.58
UBE2D3-209ENST00000394804 RETREG1Q9H6L5 497 aa11.41□□□□□ -0.58
UBE2D3-209ENST00000394804 DUS2Q9NX74 493 aaKnown RBP11.41□□□□□ -0.58
UBE2D3-209ENST00000394804 SAGE2PA6NJ88 616 aa11.41□□□□□ -0.58
UBE2D3-209ENST00000394804 CLIC1O00299 241 aa11.41□□□□□ -0.58
UBE2D3-209ENST00000394804 ARHGEF9O43307 516 aa11.41□□□□□ -0.58
UBE2D3-209ENST00000394804 IGLV3-25P01717 112 aa11.41□□□□□ -0.58
UBE2D3-209ENST00000394804 C8GP07360 202 aa11.41□□□□□ -0.58
UBE2D3-209ENST00000394804 PRPS1L1P21108 318 aa11.41□□□□□ -0.58
UBE2D3-209ENST00000394804 FPR1P21462 350 aa11.41□□□□□ -0.58
UBE2D3-209ENST00000394804 ZNF140P52738 457 aaPredicted RBP11.41□□□□□ -0.58
UBE2D3-209ENST00000394804 CSNK2BP67870 215 aa11.41□□□□□ -0.58
UBE2D3-209ENST00000394804 CYP4F2P78329 520 aa11.41□□□□□ -0.58
UBE2D3-209ENST00000394804 PIGFQ07326 219 aa11.41□□□□□ -0.58
UBE2D3-209ENST00000394804 KRT33BQ14525 404 aa11.41□□□□□ -0.58
UBE2D3-209ENST00000394804 SEMA3AQ14563 771 aa11.41□□□□□ -0.58
UBE2D3-209ENST00000394804 CYBRD1Q53TN4 286 aa11.41□□□□□ -0.58
UBE2D3-209ENST00000394804 ENPP6Q6UWR7 440 aa11.41□□□□□ -0.58
UBE2D3-209ENST00000394804 RGL4Q8IZJ4 473 aa11.41□□□□□ -0.58
UBE2D3-209ENST00000394804 C11orf65Q8NCR3 313 aa11.41□□□□□ -0.58
UBE2D3-209ENST00000394804 IPCEF1Q8WWN9 437 aaPredicted RBP11.41□□□□□ -0.58
UBE2D3-209ENST00000394804 FCGR1BQ92637 280 aa11.41□□□□□ -0.58
UBE2D3-209ENST00000394804 FATE1Q969F0 183 aa11.41□□□□□ -0.58
UBE2D3-209ENST00000394804 SNX8Q9Y5X2 465 aa11.41□□□□□ -0.58
UBE2D3-209ENST00000394804 DRGXA6NNA5 263 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms