RNA–Protein interactions for RNA: ENST00000394601.8

PTBP1-204, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PTBP1, Length 3,185 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-204ENST00000394601 ZNF347Q96SE7 839 aa15.21■□□□□ 0.03
PTBP1-204ENST00000394601 FEM1AQ9BSK4 669 aa15.21■□□□□ 0.03
PTBP1-204ENST00000394601 C9orf16Q9BUW7 83 aa15.21■□□□□ 0.03
PTBP1-204ENST00000394601 ITM2BQ9Y287 266 aa15.21■□□□□ 0.03
PTBP1-204ENST00000394601 CARD8Q9Y2G2 431 aa15.21■□□□□ 0.03
PTBP1-204ENST00000394601 BACE2Q9Y5Z0 518 aa15.21■□□□□ 0.03
PTBP1-204ENST00000394601 ESR1P03372 595 aa15.21■□□□□ 0.03
PTBP1-204ENST00000394601 MYF6P23409 242 aa15.21■□□□□ 0.03
PTBP1-204ENST00000394601 HMGCLP35914 325 aa15.21■□□□□ 0.03
PTBP1-204ENST00000394601 CAPGP40121 348 aa15.21■□□□□ 0.03
PTBP1-204ENST00000394601 LIPEQ05469 1076 aa15.21■□□□□ 0.03
PTBP1-204ENST00000394601 SELPLGQ14242 412 aa15.21■□□□□ 0.03
PTBP1-204ENST00000394601 BCL2A1Q16548 175 aa15.21■□□□□ 0.03
PTBP1-204ENST00000394601 OR56A4Q8NGH8 313 aa15.21■□□□□ 0.03
PTBP1-204ENST00000394601 RPL3LQ92901 407 aaKnown RBP15.21■□□□□ 0.03
PTBP1-204ENST00000394601 SH3GL1Q99961 368 aa15.21■□□□□ 0.03
PTBP1-204ENST00000394601 TMEM45AQ9NWC5 275 aa15.21■□□□□ 0.03
PTBP1-204ENST00000394601 ADPRHL2Q9NX46 363 aa15.21■□□□□ 0.03
PTBP1-204ENST00000394601 DKK3Q9UBP4 350 aa15.21■□□□□ 0.03
PTBP1-204ENST00000394601 TRMT6Q9UJA5 497 aaKnown RBP15.21■□□□□ 0.03
PTBP1-204ENST00000394601 PRSS21Q9Y6M0 314 aa15.21■□□□□ 0.03
PTBP1-204ENST00000394601 PIKFYVEQ9Y2I7 2098 aa15.21■□□□□ 0.02
PTBP1-204ENST00000394601 TBKBP1A7MCY6 615 aa15.2■□□□□ 0.02
PTBP1-204ENST00000394601 JRKO75564 520 aa15.2■□□□□ 0.02
PTBP1-204ENST00000394601 MAP2K4P45985 399 aa15.2■□□□□ 0.02
PTBP1-204ENST00000394601 TRAF3Q13114 568 aa15.2■□□□□ 0.02
PTBP1-204ENST00000394601 CCDC58Q4VC31 144 aa15.2■□□□□ 0.02
PTBP1-204ENST00000394601 INO80DQ53TQ3 878 aaPredicted RBP15.2■□□□□ 0.02
PTBP1-204ENST00000394601 RIMKLAQ8IXN7 391 aa15.2■□□□□ 0.02
PTBP1-204ENST00000394601 REM2Q8IYK8 340 aaPredicted RBP15.2■□□□□ 0.02
PTBP1-204ENST00000394601 MICU2Q8IYU8 434 aa15.2■□□□□ 0.02
PTBP1-204ENST00000394601 UBE2J2Q8N2K1 259 aa15.2■□□□□ 0.02
PTBP1-204ENST00000394601 CDYL2Q8N8U2 506 aa15.2■□□□□ 0.02
PTBP1-204ENST00000394601 SUN5Q8TC36 379 aa15.2■□□□□ 0.02
PTBP1-204ENST00000394601 ADAMTS16Q8TE57 1224 aa15.2■□□□□ 0.02
PTBP1-204ENST00000394601 BOCQ9BWV1 1114 aa15.2■□□□□ 0.02
PTBP1-204ENST00000394601 ADGRE3Q9BY15 652 aa15.2■□□□□ 0.02
PTBP1-204ENST00000394601 K7ERQ8 282 aa15.2■□□□□ 0.02
PTBP1-204ENST00000394601 ZNF821O75541 412 aaPredicted RBP15.2■□□□□ 0.02
PTBP1-204ENST00000394601 RASAL1O95294 804 aa15.2■□□□□ 0.02
PTBP1-204ENST00000394601 ALPIP09923 528 aa15.2■□□□□ 0.02
PTBP1-204ENST00000394601 HTR1BP28222 390 aa15.2■□□□□ 0.02
PTBP1-204ENST00000394601 RFC2P35250 354 aa15.2■□□□□ 0.02
PTBP1-204ENST00000394601 ZRANB3Q5FWF4 1079 aa15.2■□□□□ 0.02
PTBP1-204ENST00000394601 CATSPEREQ5SY80 951 aa15.2■□□□□ 0.02
PTBP1-204ENST00000394601 ATXN7L2Q5T6C5 722 aaPredicted RBP15.2■□□□□ 0.02
PTBP1-204ENST00000394601 GOLGA7Q7Z5G4 137 aa15.2■□□□□ 0.02
PTBP1-204ENST00000394601 EFHBQ8N7U6 833 aa15.2■□□□□ 0.02
PTBP1-204ENST00000394601 NECTIN4Q96NY8 510 aa15.2■□□□□ 0.02
PTBP1-204ENST00000394601 HBEGFQ99075 208 aa15.2■□□□□ 0.02
PTBP1-204ENST00000394601 INVSQ9Y283 1065 aa15.2■□□□□ 0.02
PTBP1-204ENST00000394601 VPS9D1Q9Y2B5 631 aa15.2■□□□□ 0.02
PTBP1-204ENST00000394601 FCF1Q9Y324 198 aaKnown RBP15.2■□□□□ 0.02
PTBP1-204ENST00000394601 COMMD10Q9Y6G5 202 aa15.2■□□□□ 0.02
PTBP1-204ENST00000394601 FAM234BA2RU67 622 aa15.2■□□□□ 0.02
PTBP1-204ENST00000394601 UPK1AO00322 258 aa15.2■□□□□ 0.02
PTBP1-204ENST00000394601 CYP7B1O75881 506 aa15.2■□□□□ 0.02
PTBP1-204ENST00000394601 BMP4P12644 408 aa15.2■□□□□ 0.02
PTBP1-204ENST00000394601 ZNF783Q6ZMS7 281 aa15.2■□□□□ 0.02
PTBP1-204ENST00000394601 FRA10AC1Q70Z53 315 aa15.2■□□□□ 0.02
PTBP1-204ENST00000394601 PLD3Q8IV08 490 aa15.2■□□□□ 0.02
PTBP1-204ENST00000394601 TRMT2BQ96GJ1 504 aaKnown RBP15.2■□□□□ 0.02
PTBP1-204ENST00000394601 CENPNQ96H22 339 aaPredicted RBP15.2■□□□□ 0.02
PTBP1-204ENST00000394601 TTYH2Q9BSA4 534 aa15.2■□□□□ 0.02
PTBP1-204ENST00000394601 ALOXE3Q9BYJ1 711 aa15.2■□□□□ 0.02
PTBP1-204ENST00000394601 NTN4Q9HB63 628 aa15.2■□□□□ 0.02
PTBP1-204ENST00000394601 KLHL3Q9UH77 587 aa15.2■□□□□ 0.02
PTBP1-204ENST00000394601 PTBP2Q9UKA9 531 aaKnown RBP15.2■□□□□ 0.02
PTBP1-204ENST00000394601 PCM1Q15154 2024 aa15.19■□□□□ 0.02
PTBP1-204ENST00000394601 LDLRP01130 860 aa15.19■□□□□ 0.02
PTBP1-204ENST00000394601 DBTP11182 482 aaKnown RBP15.19■□□□□ 0.02
PTBP1-204ENST00000394601 CHRNB1P11230 501 aa15.19■□□□□ 0.02
PTBP1-204ENST00000394601 RPS3AP61247 264 aaKnown RBP15.19■□□□□ 0.02
PTBP1-204ENST00000394601 VAC14Q08AM6 782 aa15.19■□□□□ 0.02
PTBP1-204ENST00000394601 NFYCQ13952 458 aa15.19■□□□□ 0.02
PTBP1-204ENST00000394601 ABRAXAS2Q15018 415 aa15.19■□□□□ 0.02
PTBP1-204ENST00000394601 RBBP7Q16576 425 aa15.19■□□□□ 0.02
PTBP1-204ENST00000394601 Q6ZNB5 142 aa15.19■□□□□ 0.02
PTBP1-204ENST00000394601 GALNT5Q7Z7M9 940 aa15.19■□□□□ 0.02
PTBP1-204ENST00000394601 PDPRQ8NCN5 879 aa15.19■□□□□ 0.02
PTBP1-204ENST00000394601 VWCEQ96DN2 955 aa15.19■□□□□ 0.02
PTBP1-204ENST00000394601 ITPKCQ96DU7 683 aa15.19■□□□□ 0.02
PTBP1-204ENST00000394601 MAGEE1Q9HCI5 957 aa15.19■□□□□ 0.02
PTBP1-204ENST00000394601 NUDT4Q9NZJ9 180 aa15.19■□□□□ 0.02
PTBP1-204ENST00000394601 TRBV5-4A0A0C4DH59 114 aa15.19■□□□□ 0.02
PTBP1-204ENST00000394601 CCDC154A6NI56 674 aa15.19■□□□□ 0.02
PTBP1-204ENST00000394601 STX7O15400 261 aaKnown RBP15.19■□□□□ 0.02
PTBP1-204ENST00000394601 GPIP06744 558 aa15.19■□□□□ 0.02
PTBP1-204ENST00000394601 IRF1P10914 325 aa15.19■□□□□ 0.02
PTBP1-204ENST00000394601 EEFSECP57772 596 aaKnown RBP15.19■□□□□ 0.02
PTBP1-204ENST00000394601 OR4D2P58180 307 aa15.19■□□□□ 0.02
PTBP1-204ENST00000394601 IFITM2Q01629 132 aa15.19■□□□□ 0.02
PTBP1-204ENST00000394601 CACNG1Q06432 222 aa15.19■□□□□ 0.02
PTBP1-204ENST00000394601 ZNF420Q8TAQ5 688 aaPredicted RBP15.19■□□□□ 0.02
PTBP1-204ENST00000394601 FBXO30Q8TB52 745 aa15.19■□□□□ 0.02
PTBP1-204ENST00000394601 ZNF486Q96H40 463 aaPredicted RBP15.19■□□□□ 0.02
PTBP1-204ENST00000394601 MUC13Q9H3R2 512 aa15.19■□□□□ 0.02
PTBP1-204ENST00000394601 SCHIP1Q9P0W5 487 aaPredicted RBP15.19■□□□□ 0.02
PTBP1-204ENST00000394601 PCDHB9Q9Y5E1 797 aa15.19■□□□□ 0.02
PTBP1-204ENST00000394601 GRXCR2A6NFK2 248 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms