RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 ALDH3A2P51648 485 aa13.18□□□□□ -0.3
GTF2F1-201ENST00000394456 CHRNB3Q05901 458 aa13.18□□□□□ -0.3
GTF2F1-201ENST00000394456 CRY1Q16526 586 aa13.18□□□□□ -0.3
GTF2F1-201ENST00000394456 CCNYL2Q5T2Q4 361 aa13.18□□□□□ -0.3
GTF2F1-201ENST00000394456 TBC1D15Q8TC07 691 aa13.18□□□□□ -0.3
GTF2F1-201ENST00000394456 NETO1Q8TDF5 533 aa13.18□□□□□ -0.3
GTF2F1-201ENST00000394456 MRPS31Q92665 395 aaKnown RBP13.18□□□□□ -0.3
GTF2F1-201ENST00000394456 RHBDF1Q96CC6 855 aa13.18□□□□□ -0.3
GTF2F1-201ENST00000394456 TSSK3Q96PN8 268 aa13.18□□□□□ -0.3
GTF2F1-201ENST00000394456 MYOCQ99972 504 aa13.18□□□□□ -0.3
GTF2F1-201ENST00000394456 PAIP1Q9H074 479 aaKnown RBP13.18□□□□□ -0.3
GTF2F1-201ENST00000394456 ZBP1Q9H171 429 aa13.18□□□□□ -0.3
GTF2F1-201ENST00000394456 ZFYVE1Q9HBF4 777 aa13.18□□□□□ -0.3
GTF2F1-201ENST00000394456 FAM8A1Q9UBU6 413 aa13.18□□□□□ -0.3
GTF2F1-201ENST00000394456 VPS4AQ9UN37 437 aa13.18□□□□□ -0.3
GTF2F1-201ENST00000394456 VPS9D1Q9Y2B5 631 aa13.18□□□□□ -0.3
GTF2F1-201ENST00000394456 PIKFYVEQ9Y2I7 2098 aa13.18□□□□□ -0.3
GTF2F1-201ENST00000394456 RAD51BO15315 384 aa13.18□□□□□ -0.3
GTF2F1-201ENST00000394456 XYLBO75191 536 aa13.18□□□□□ -0.3
GTF2F1-201ENST00000394456 DIRAS1O95057 198 aa13.18□□□□□ -0.3
GTF2F1-201ENST00000394456 OLFM2O95897 454 aa13.18□□□□□ -0.3
GTF2F1-201ENST00000394456 S100BP04271 92 aaPredicted RBP13.18□□□□□ -0.3
GTF2F1-201ENST00000394456 PGRP06401 933 aa13.18□□□□□ -0.3
GTF2F1-201ENST00000394456 C8AP07357 584 aa13.18□□□□□ -0.3
GTF2F1-201ENST00000394456 JAK1P23458 1154 aa13.18□□□□□ -0.3
GTF2F1-201ENST00000394456 DCKP27707 260 aa13.18□□□□□ -0.3
GTF2F1-201ENST00000394456 HLCSP50747 726 aa13.18□□□□□ -0.3
GTF2F1-201ENST00000394456 MAPKAPK3Q16644 382 aa13.18□□□□□ -0.3
GTF2F1-201ENST00000394456 ALDH16A1Q8IZ83 802 aa13.18□□□□□ -0.3
GTF2F1-201ENST00000394456 KLHL23Q8NBE8 558 aa13.18□□□□□ -0.3
GTF2F1-201ENST00000394456 GPR26Q8NDV2 337 aa13.18□□□□□ -0.3
GTF2F1-201ENST00000394456 NCLNQ969V3 563 aa13.18□□□□□ -0.3
GTF2F1-201ENST00000394456 DPY30Q9C005 99 aa13.18□□□□□ -0.3
GTF2F1-201ENST00000394456 ING2Q9H160 280 aa13.18□□□□□ -0.3
GTF2F1-201ENST00000394456 PKD2L2Q9NZM6 624 aa13.18□□□□□ -0.3
GTF2F1-201ENST00000394456 OPTCQ9UBM4 332 aa13.18□□□□□ -0.3
GTF2F1-201ENST00000394456 PCDHB14Q9Y5E9 798 aa13.18□□□□□ -0.3
GTF2F1-201ENST00000394456 NPIPB15A6NHN6 443 aaPredicted RBP13.17□□□□□ -0.3
GTF2F1-201ENST00000394456 G3V2T6 193 aa13.17□□□□□ -0.3
GTF2F1-201ENST00000394456 MANBAO00462 879 aa13.17□□□□□ -0.3
GTF2F1-201ENST00000394456 MTX2O75431 263 aa13.17□□□□□ -0.3
GTF2F1-201ENST00000394456 GLUD1P00367 558 aa13.17□□□□□ -0.3
GTF2F1-201ENST00000394456 DPY19L1Q2PZI1 675 aa13.17□□□□□ -0.3
GTF2F1-201ENST00000394456 FAM98BQ52LJ0 330 aaKnown RBP13.17□□□□□ -0.3
GTF2F1-201ENST00000394456 GALNT5Q7Z7M9 940 aa13.17□□□□□ -0.3
GTF2F1-201ENST00000394456 TMC8Q8IU68 726 aa13.17□□□□□ -0.3
GTF2F1-201ENST00000394456 VRK3Q8IV63 474 aa13.17□□□□□ -0.3
GTF2F1-201ENST00000394456 FAM162AQ96A26 154 aa13.17□□□□□ -0.3
GTF2F1-201ENST00000394456 SLC47A1Q96FL8 570 aa13.17□□□□□ -0.3
GTF2F1-201ENST00000394456 OR52E6Q96RD3 313 aa13.17□□□□□ -0.3
GTF2F1-201ENST00000394456 CORO1BQ9BR76 489 aa13.17□□□□□ -0.3
GTF2F1-201ENST00000394456 RHNO1Q9BSD3 238 aa13.17□□□□□ -0.3
GTF2F1-201ENST00000394456 ACPTQ9BZG2 426 aa13.17□□□□□ -0.3
GTF2F1-201ENST00000394456 CD244Q9BZW8 370 aa13.17□□□□□ -0.3
GTF2F1-201ENST00000394456 MUC13Q9H3R2 512 aa13.17□□□□□ -0.3
GTF2F1-201ENST00000394456 ACTR8Q9H981 624 aa13.17□□□□□ -0.3
GTF2F1-201ENST00000394456 FAM118AQ9NWS6 357 aa13.17□□□□□ -0.3
GTF2F1-201ENST00000394456 PAK1IP1Q9NWT1 392 aaPredicted RBP13.17□□□□□ -0.3
GTF2F1-201ENST00000394456 HCFC1R1Q9NWW0 138 aa13.17□□□□□ -0.3
GTF2F1-201ENST00000394456 GPRC5BQ9NZH0 403 aa13.17□□□□□ -0.3
GTF2F1-201ENST00000394456 SH3BP1Q9Y3L3 701 aa13.17□□□□□ -0.3
GTF2F1-201ENST00000394456 CORINQ9Y5Q5 1042 aa13.17□□□□□ -0.3
GTF2F1-201ENST00000394456 CXCR6O00574 342 aa13.17□□□□□ -0.3
GTF2F1-201ENST00000394456 CCL16O15467 120 aa13.17□□□□□ -0.3
GTF2F1-201ENST00000394456 PRAMEF4O60810 478 aa13.17□□□□□ -0.3
GTF2F1-201ENST00000394456 SH3BGRLO75368 114 aa13.17□□□□□ -0.3
GTF2F1-201ENST00000394456 DEAF1O75398 565 aaPredicted RBP13.17□□□□□ -0.3
GTF2F1-201ENST00000394456 CXCL14O95715 111 aa13.17□□□□□ -0.3
GTF2F1-201ENST00000394456 BCKDHAP12694 445 aa13.17□□□□□ -0.3
GTF2F1-201ENST00000394456 PPM1AP35813 382 aa13.17□□□□□ -0.3
GTF2F1-201ENST00000394456 KCNAB2Q13303 367 aa13.17□□□□□ -0.3
GTF2F1-201ENST00000394456 PON2Q15165 354 aa13.17□□□□□ -0.3
GTF2F1-201ENST00000394456 CDKN3Q16667 212 aa13.17□□□□□ -0.3
GTF2F1-201ENST00000394456 DGKKQ5KSL6 1271 aa13.17□□□□□ -0.3
GTF2F1-201ENST00000394456 GPRC6AQ5T6X5 926 aa13.17□□□□□ -0.3
GTF2F1-201ENST00000394456 PRAMEF9Q5VWM5 478 aa13.17□□□□□ -0.3
GTF2F1-201ENST00000394456 DHRS4L2Q6PKH6 230 aa13.17□□□□□ -0.3
GTF2F1-201ENST00000394456 ZBTB2Q8N680 514 aa13.17□□□□□ -0.3
GTF2F1-201ENST00000394456 VOPP1Q96AW1 172 aa13.17□□□□□ -0.3
GTF2F1-201ENST00000394456 THAP11Q96EK4 314 aa13.17□□□□□ -0.3
GTF2F1-201ENST00000394456 DGCR6LQ9BY27 220 aa13.17□□□□□ -0.3
GTF2F1-201ENST00000394456 FAM126AQ9BYI3 521 aaPredicted RBP13.17□□□□□ -0.3
GTF2F1-201ENST00000394456 LRTM1Q9HBL6 345 aa13.17□□□□□ -0.3
GTF2F1-201ENST00000394456 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.17□□□□□ -0.3
GTF2F1-201ENST00000394456 CD84Q9UIB8 345 aa13.17□□□□□ -0.3
GTF2F1-201ENST00000394456 CRLS1Q9UJA2 301 aa13.17□□□□□ -0.3
GTF2F1-201ENST00000394456 LSM7Q9UK45 103 aaKnown RBP13.17□□□□□ -0.3
GTF2F1-201ENST00000394456 OARD1Q9Y530 152 aa13.17□□□□□ -0.3
GTF2F1-201ENST00000394456 GFRA2O00451 464 aa13.16□□□□□ -0.3
GTF2F1-201ENST00000394456 ULK1O75385 1050 aa13.16□□□□□ -0.3
GTF2F1-201ENST00000394456 ZNF821O75541 412 aaPredicted RBP13.16□□□□□ -0.3
GTF2F1-201ENST00000394456 ZBTB11O95625 1053 aaPredicted RBP13.16□□□□□ -0.3
GTF2F1-201ENST00000394456 PDYNP01213 254 aa13.16□□□□□ -0.3
GTF2F1-201ENST00000394456 CTSAP10619 480 aa13.16□□□□□ -0.3
GTF2F1-201ENST00000394456 CYP4B1P13584 511 aa13.16□□□□□ -0.3
GTF2F1-201ENST00000394456 ZNF7P17097 686 aaPredicted RBP13.16□□□□□ -0.3
GTF2F1-201ENST00000394456 CD70P32970 193 aa13.16□□□□□ -0.3
GTF2F1-201ENST00000394456 B4GALNT1Q00973 533 aa13.16□□□□□ -0.3
GTF2F1-201ENST00000394456 ANKRD26P1Q6NSI1 321 aa13.16□□□□□ -0.3
GTF2F1-201ENST00000394456 NECAB2Q7Z6G3 386 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms