RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 PTPRNQ16849 979 aa18.59■□□□□ 0.57
CCDC50-202ENST00000392456 RBM20Q5T481 1227 aaKnown RBP18.59■□□□□ 0.57
CCDC50-202ENST00000392456 PARM1Q6UWI2 310 aa18.59■□□□□ 0.57
CCDC50-202ENST00000392456 KIAA0408Q6ZU52 694 aa18.59■□□□□ 0.57
CCDC50-202ENST00000392456 CILP2Q8IUL8 1156 aa18.59■□□□□ 0.57
CCDC50-202ENST00000392456 LHFPL5Q8TAF8 219 aa18.59■□□□□ 0.57
CCDC50-202ENST00000392456 C17orf62Q9BQA9 187 aa18.59■□□□□ 0.57
CCDC50-202ENST00000392456 KXD1Q9BQD3 176 aa18.59■□□□□ 0.57
CCDC50-202ENST00000392456 TTYH1Q9H313 450 aaPredicted RBP18.59■□□□□ 0.57
CCDC50-202ENST00000392456 MFSD1Q9H3U5 465 aa18.59■□□□□ 0.57
CCDC50-202ENST00000392456 SLA2Q9H6Q3 261 aa18.59■□□□□ 0.57
CCDC50-202ENST00000392456 GPN2Q9H9Y4 310 aaPredicted RBP18.59■□□□□ 0.57
CCDC50-202ENST00000392456 TRPV4Q9HBA0 871 aa18.59■□□□□ 0.57
CCDC50-202ENST00000392456 ZFP14Q9HCL3 533 aa18.59■□□□□ 0.57
CCDC50-202ENST00000392456 TIGARQ9NQ88 270 aa18.59■□□□□ 0.57
CCDC50-202ENST00000392456 POLE4Q9NR33 117 aa18.59■□□□□ 0.57
CCDC50-202ENST00000392456 CLDND1Q9NY35 253 aa18.59■□□□□ 0.57
CCDC50-202ENST00000392456 SLC25A13Q9UJS0 675 aa18.59■□□□□ 0.57
CCDC50-202ENST00000392456 RIMKLBQ9ULI2 386 aa18.59■□□□□ 0.57
CCDC50-202ENST00000392456 MTF2Q9Y483 593 aaPredicted RBP18.59■□□□□ 0.57
CCDC50-202ENST00000392456 A0A1W2PQ72 361 aa18.59■□□□□ 0.57
CCDC50-202ENST00000392456 SLC7A4O43246 635 aa18.59■□□□□ 0.57
CCDC50-202ENST00000392456 RHAGQ02094 409 aa18.59■□□□□ 0.57
CCDC50-202ENST00000392456 GRIN2CQ14957 1233 aa18.59■□□□□ 0.57
CCDC50-202ENST00000392456 TAF1AQ15573 450 aaPredicted RBP18.59■□□□□ 0.57
CCDC50-202ENST00000392456 LRRC73Q5JTD7 316 aa18.59■□□□□ 0.57
CCDC50-202ENST00000392456 ATAT1Q5SQI0 421 aa18.59■□□□□ 0.57
CCDC50-202ENST00000392456 SLC41A1Q8IVJ1 513 aa18.59■□□□□ 0.57
CCDC50-202ENST00000392456 CEP97Q8IW35 865 aa18.59■□□□□ 0.57
CCDC50-202ENST00000392456 TCAIMQ8N3R3 496 aa18.59■□□□□ 0.57
CCDC50-202ENST00000392456 PAF1Q8N7H5 531 aa18.59■□□□□ 0.57
CCDC50-202ENST00000392456 OR2A12Q8NGT7 310 aa18.59■□□□□ 0.57
CCDC50-202ENST00000392456 FRS2Q8WU20 508 aa18.59■□□□□ 0.57
CCDC50-202ENST00000392456 GPR22Q99680 433 aa18.59■□□□□ 0.57
CCDC50-202ENST00000392456 EFHD1Q9BUP0 239 aa18.59■□□□□ 0.57
CCDC50-202ENST00000392456 PSME2Q9UL46 239 aa18.59■□□□□ 0.57
CCDC50-202ENST00000392456 EMCNQ9ULC0 261 aa18.59■□□□□ 0.57
CCDC50-202ENST00000392456 CAB39Q9Y376 341 aaPredicted RBP18.59■□□□□ 0.57
CCDC50-202ENST00000392456 A0A0G2JMP0 313 aa18.58■□□□□ 0.57
CCDC50-202ENST00000392456 C12orf71A8MTZ7 269 aa18.58■□□□□ 0.57
CCDC50-202ENST00000392456 BET1O15155 118 aa18.58■□□□□ 0.57
CCDC50-202ENST00000392456 PHGDHO43175 533 aaKnown RBP18.58■□□□□ 0.57
CCDC50-202ENST00000392456 MAN1A2O60476 641 aa18.58■□□□□ 0.57
CCDC50-202ENST00000392456 RPP40O75818 363 aaKnown RBP18.58■□□□□ 0.57
CCDC50-202ENST00000392456 ADH1CP00326 375 aa18.58■□□□□ 0.57
CCDC50-202ENST00000392456 MAGEA12P43365 314 aa18.58■□□□□ 0.57
CCDC50-202ENST00000392456 CSNK1DP48730 415 aa18.58■□□□□ 0.57
CCDC50-202ENST00000392456 SRP54P61011 504 aaKnown RBP18.58■□□□□ 0.57
CCDC50-202ENST00000392456 SNRPD1P62314 119 aaKnown RBP18.58■□□□□ 0.57
CCDC50-202ENST00000392456 RAD51Q06609 339 aa18.58■□□□□ 0.57
CCDC50-202ENST00000392456 TARDBPQ13148 414 aaKnown RBP eCLIP18.58■□□□□ 0.57
CCDC50-202ENST00000392456 C6orf132Q5T0Z8 1188 aa18.58■□□□□ 0.57
CCDC50-202ENST00000392456 ZNF786Q8N393 782 aa18.58■□□□□ 0.57
CCDC50-202ENST00000392456 STYXQ8WUJ0 223 aa18.58■□□□□ 0.57
CCDC50-202ENST00000392456 E2F7Q96AV8 911 aa18.58■□□□□ 0.57
CCDC50-202ENST00000392456 SH3KBP1Q96B97 665 aa18.58■□□□□ 0.57
CCDC50-202ENST00000392456 RAD21L1Q9H4I0 556 aa18.58■□□□□ 0.57
CCDC50-202ENST00000392456 ZDHHC6Q9H6R6 413 aa18.58■□□□□ 0.57
CCDC50-202ENST00000392456 IFT22Q9H7X7 185 aa18.58■□□□□ 0.57
CCDC50-202ENST00000392456 ZNF395Q9H8N7 513 aaPredicted RBP18.58■□□□□ 0.57
CCDC50-202ENST00000392456 NLE1Q9NVX2 485 aaPredicted RBP18.58■□□□□ 0.57
CCDC50-202ENST00000392456 POLR3BQ9NW08 1133 aaPredicted RBP18.58■□□□□ 0.57
CCDC50-202ENST00000392456 ADPRHL2Q9NX46 363 aa18.58■□□□□ 0.57
CCDC50-202ENST00000392456 MFN2O95140 757 aa18.58■□□□□ 0.56
CCDC50-202ENST00000392456 MATN1P21941 496 aa18.58■□□□□ 0.56
CCDC50-202ENST00000392456 EEF1DP29692 281 aaKnown RBP18.58■□□□□ 0.56
CCDC50-202ENST00000392456 CRHR1P34998 444 aa18.58■□□□□ 0.56
CCDC50-202ENST00000392456 LEPRP48357 1165 aaKnown RBP18.58■□□□□ 0.56
CCDC50-202ENST00000392456 MAPK10P53779 464 aa18.58■□□□□ 0.56
CCDC50-202ENST00000392456 CARD16Q5EG05 197 aa18.58■□□□□ 0.56
CCDC50-202ENST00000392456 S100ZQ8WXG8 99 aa18.58■□□□□ 0.56
CCDC50-202ENST00000392456 ISL2Q96A47 359 aa18.58■□□□□ 0.56
CCDC50-202ENST00000392456 ISG20Q96AZ6 181 aaKnown RBP18.58■□□□□ 0.56
CCDC50-202ENST00000392456 CHFRQ96EP1 664 aa18.58■□□□□ 0.56
CCDC50-202ENST00000392456 TUBA1CQ9BQE3 449 aa18.58■□□□□ 0.56
CCDC50-202ENST00000392456 POMKQ9H5K3 350 aa18.58■□□□□ 0.56
CCDC50-202ENST00000392456 ZDHHC4Q9NPG8 344 aa18.58■□□□□ 0.56
CCDC50-202ENST00000392456 PKD2L2Q9NZM6 624 aa18.58■□□□□ 0.56
CCDC50-202ENST00000392456 SIRPGQ9P1W8 387 aa18.58■□□□□ 0.56
CCDC50-202ENST00000392456 TNFRSF10DQ9UBN6 386 aa18.58■□□□□ 0.56
CCDC50-202ENST00000392456 MARCOQ9UEW3 520 aaPredicted RBP18.58■□□□□ 0.56
CCDC50-202ENST00000392456 F5P12259 2224 aa18.57■□□□□ 0.56
CCDC50-202ENST00000392456 MEN1O00255 615 aa18.57■□□□□ 0.56
CCDC50-202ENST00000392456 S1PR4O95977 384 aa18.57■□□□□ 0.56
CCDC50-202ENST00000392456 GSRP00390 522 aa18.57■□□□□ 0.56
CCDC50-202ENST00000392456 C2P06681 752 aa18.57■□□□□ 0.56
CCDC50-202ENST00000392456 KITP10721 976 aa18.57■□□□□ 0.56
CCDC50-202ENST00000392456 CLK1P49759 484 aaKnown RBP18.57■□□□□ 0.56
CCDC50-202ENST00000392456 VAC14Q08AM6 782 aa18.57■□□□□ 0.56
CCDC50-202ENST00000392456 TTC33Q6PID6 262 aaPredicted RBP18.57■□□□□ 0.56
CCDC50-202ENST00000392456 CEP19Q96LK0 163 aa18.57■□□□□ 0.56
CCDC50-202ENST00000392456 DEPDC7Q96QD5 511 aa18.57■□□□□ 0.56
CCDC50-202ENST00000392456 TMEM216Q9P0N5 145 aa18.57■□□□□ 0.56
CCDC50-202ENST00000392456 FKBPLQ9UIM3 349 aa18.57■□□□□ 0.56
CCDC50-202ENST00000392456 CRYL1Q9Y2S2 319 aa18.57■□□□□ 0.56
CCDC50-202ENST00000392456 A0A096LPK6 155 aa18.57■□□□□ 0.56
CCDC50-202ENST00000392456 A0A0X1KG70 313 aa18.57■□□□□ 0.56
CCDC50-202ENST00000392456 C2orf81A6NN90 581 aa18.57■□□□□ 0.56
CCDC50-202ENST00000392456 RNASEH2AO75792 299 aaKnown RBP18.57■□□□□ 0.56
CCDC50-202ENST00000392456 PAHP00439 452 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms