RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 SPATA7Q9P0W8 599 aa12.27□□□□□ -0.45
GGPS1-203ENST00000391855 SLC39A10Q9ULF5 831 aa12.27□□□□□ -0.45
GGPS1-203ENST00000391855 WDFY3Q8IZQ1 3526 aa12.26□□□□□ -0.45
GGPS1-203ENST00000391855 A0A0J9YY10 115 aa12.26□□□□□ -0.45
GGPS1-203ENST00000391855 SLC9B1P1A6NJY1 282 aa12.26□□□□□ -0.45
GGPS1-203ENST00000391855 RASGRF2O14827 1237 aa12.26□□□□□ -0.45
GGPS1-203ENST00000391855 CPNE3O75131 537 aaKnown RBP12.26□□□□□ -0.45
GGPS1-203ENST00000391855 KIAA0754O94854 1291 aa12.26□□□□□ -0.45
GGPS1-203ENST00000391855 TUBB4AP04350 444 aa12.26□□□□□ -0.45
GGPS1-203ENST00000391855 UGT2B7P16662 529 aa12.26□□□□□ -0.45
GGPS1-203ENST00000391855 CBLBQ13191 982 aa12.26□□□□□ -0.45
GGPS1-203ENST00000391855 CTBP1Q13363 440 aa12.26□□□□□ -0.45
GGPS1-203ENST00000391855 FRG1Q14331 258 aaKnown RBP12.26□□□□□ -0.45
GGPS1-203ENST00000391855 UGT3A1Q6NUS8 523 aa12.26□□□□□ -0.45
GGPS1-203ENST00000391855 C6orf15Q6UXA7 325 aaPredicted RBP12.26□□□□□ -0.45
GGPS1-203ENST00000391855 ZNF572Q7Z3I7 529 aaPredicted RBP12.26□□□□□ -0.45
GGPS1-203ENST00000391855 VASH2Q86V25 355 aa12.26□□□□□ -0.45
GGPS1-203ENST00000391855 C17orf53Q8N3J3 647 aaPredicted RBP12.26□□□□□ -0.45
GGPS1-203ENST00000391855 C19orf47Q8N9M1 422 aaKnown RBP12.26□□□□□ -0.45
GGPS1-203ENST00000391855 C2CD4AQ8NCU7 369 aaPredicted RBP12.26□□□□□ -0.45
GGPS1-203ENST00000391855 OR2L8Q8NGY9 312 aa12.26□□□□□ -0.45
GGPS1-203ENST00000391855 HMGCLL1Q8TB92 370 aa12.26□□□□□ -0.45
GGPS1-203ENST00000391855 ZNF501Q96CX3 271 aaPredicted RBP12.26□□□□□ -0.45
GGPS1-203ENST00000391855 TRAPPC9Q96Q05 1148 aa12.26□□□□□ -0.45
GGPS1-203ENST00000391855 ERP44Q9BS26 406 aa12.26□□□□□ -0.45
GGPS1-203ENST00000391855 FAM117AQ9C073 453 aa12.26□□□□□ -0.45
GGPS1-203ENST00000391855 GPN2Q9H9Y4 310 aaPredicted RBP12.26□□□□□ -0.45
GGPS1-203ENST00000391855 FAM114A2Q9NRY5 505 aa12.26□□□□□ -0.45
GGPS1-203ENST00000391855 IARS2Q9NSE4 1012 aaKnown RBP12.26□□□□□ -0.45
GGPS1-203ENST00000391855 INTS7Q9NVH2 962 aaKnown RBP12.26□□□□□ -0.45
GGPS1-203ENST00000391855 IL1RAPL1Q9NZN1 696 aa12.26□□□□□ -0.45
GGPS1-203ENST00000391855 WHRNQ9P202 907 aa12.26□□□□□ -0.45
GGPS1-203ENST00000391855 ZC3H7BQ9UGR2 993 aaKnown RBP12.26□□□□□ -0.45
GGPS1-203ENST00000391855 LNPEPQ9UIQ6 1025 aa12.26□□□□□ -0.45
GGPS1-203ENST00000391855 CORO1CQ9ULV4 474 aaPredicted RBP12.26□□□□□ -0.45
GGPS1-203ENST00000391855 CHMP2BQ9UQN3 213 aa12.26□□□□□ -0.45
GGPS1-203ENST00000391855 PCDHGA4Q9Y5G9 962 aa12.26□□□□□ -0.45
GGPS1-203ENST00000391855 ZZEF1O43149 2961 aa12.26□□□□□ -0.45
GGPS1-203ENST00000391855 ZNF891A8MT65 544 aaPredicted RBP12.25□□□□□ -0.45
GGPS1-203ENST00000391855 ISM1B1AKI9 464 aa12.25□□□□□ -0.45
GGPS1-203ENST00000391855 VPS26AO75436 327 aa12.25□□□□□ -0.45
GGPS1-203ENST00000391855 MATN4O95460 622 aa12.25□□□□□ -0.45
GGPS1-203ENST00000391855 C1orf105O95561 183 aa12.25□□□□□ -0.45
GGPS1-203ENST00000391855 CATP04040 527 aaKnown RBP12.25□□□□□ -0.45
GGPS1-203ENST00000391855 CCNYL3P0C7X3 344 aa12.25□□□□□ -0.45
GGPS1-203ENST00000391855 TPBGLP0DKB5 382 aa12.25□□□□□ -0.45
GGPS1-203ENST00000391855 CBSLP0DN79 551 aa12.25□□□□□ -0.45
GGPS1-203ENST00000391855 LIFP15018 202 aa12.25□□□□□ -0.45
GGPS1-203ENST00000391855 ST6GAL1P15907 406 aa12.25□□□□□ -0.45
GGPS1-203ENST00000391855 CD9P21926 228 aa12.25□□□□□ -0.45
GGPS1-203ENST00000391855 CBSP35520 551 aa12.25□□□□□ -0.45
GGPS1-203ENST00000391855 ELK3P41970 407 aa12.25□□□□□ -0.45
GGPS1-203ENST00000391855 STAT5AP42229 794 aa12.25□□□□□ -0.45
GGPS1-203ENST00000391855 CLCN7P51798 805 aa12.25□□□□□ -0.45
GGPS1-203ENST00000391855 MC1RQ01726 317 aa12.25□□□□□ -0.45
GGPS1-203ENST00000391855 ILF2Q12905 390 aaKnown RBP12.25□□□□□ -0.45
GGPS1-203ENST00000391855 GRB7Q14451 532 aa12.25□□□□□ -0.45
GGPS1-203ENST00000391855 KCNAB1Q14722 419 aa12.25□□□□□ -0.45
GGPS1-203ENST00000391855 NAA25Q14CX7 972 aa12.25□□□□□ -0.45
GGPS1-203ENST00000391855 MSS51Q4VC12 460 aa12.25□□□□□ -0.45
GGPS1-203ENST00000391855 ZNF789Q5FWF6 425 aa12.25□□□□□ -0.45
GGPS1-203ENST00000391855 STEAP4Q687X5 459 aa12.25□□□□□ -0.45
GGPS1-203ENST00000391855 TIPARPQ7Z3E1 657 aaKnown RBP12.25□□□□□ -0.45
GGPS1-203ENST00000391855 INPP5DQ92835 1189 aa12.25□□□□□ -0.45
GGPS1-203ENST00000391855 TCTN2Q96GX1 697 aa12.25□□□□□ -0.45
GGPS1-203ENST00000391855 SLC45A3Q96JT2 553 aa12.25□□□□□ -0.45
GGPS1-203ENST00000391855 LRFN5Q96NI6 719 aa12.25□□□□□ -0.45
GGPS1-203ENST00000391855 OR2A14Q96R47 310 aa12.25□□□□□ -0.45
GGPS1-203ENST00000391855 AARSD1Q9BTE6 412 aaKnown RBP12.25□□□□□ -0.45
GGPS1-203ENST00000391855 MENTQ9BUN1 341 aa12.25□□□□□ -0.45
GGPS1-203ENST00000391855 TRIM31Q9BZY9 425 aa12.25□□□□□ -0.45
GGPS1-203ENST00000391855 RAB17Q9H0T7 212 aa12.25□□□□□ -0.45
GGPS1-203ENST00000391855 PLAGL1Q9UM63 463 aa12.25□□□□□ -0.45
GGPS1-203ENST00000391855 PCDHB3Q9Y5E6 796 aa12.25□□□□□ -0.45
GGPS1-203ENST00000391855 TEX264Q9Y6I9 313 aa12.25□□□□□ -0.45
GGPS1-203ENST00000391855 E7ESA3 106 aa12.24□□□□□ -0.45
GGPS1-203ENST00000391855 TK2O00142 265 aa12.24□□□□□ -0.45
GGPS1-203ENST00000391855 ATXN7O15265 892 aaPredicted RBP12.24□□□□□ -0.45
GGPS1-203ENST00000391855 EIF3HO15372 352 aaKnown RBP eCLIP12.24□□□□□ -0.45
GGPS1-203ENST00000391855 BANF1O75531 89 aa12.24□□□□□ -0.45
GGPS1-203ENST00000391855 SCRG1O75711 98 aa12.24□□□□□ -0.45
GGPS1-203ENST00000391855 ITGB2P05107 769 aa12.24□□□□□ -0.45
GGPS1-203ENST00000391855 MPC1LP0DKB6 136 aa12.24□□□□□ -0.45
GGPS1-203ENST00000391855 ZNF28P17035 718 aa12.24□□□□□ -0.45
GGPS1-203ENST00000391855 RPL21P46778 160 aaKnown RBP12.24□□□□□ -0.45
GGPS1-203ENST00000391855 MPP1Q00013 466 aa12.24□□□□□ -0.45
GGPS1-203ENST00000391855 CAV1Q03135 178 aa12.24□□□□□ -0.45
GGPS1-203ENST00000391855 C2orf54Q08AI8 447 aa12.24□□□□□ -0.45
GGPS1-203ENST00000391855 GPR19Q15760 415 aa12.24□□□□□ -0.45
GGPS1-203ENST00000391855 CRTC2Q53ET0 693 aaPredicted RBP12.24□□□□□ -0.45
GGPS1-203ENST00000391855 ACSBG2Q5FVE4 666 aa12.24□□□□□ -0.45
GGPS1-203ENST00000391855 PWWP2BQ6NUJ5 590 aa12.24□□□□□ -0.45
GGPS1-203ENST00000391855 ZNF549Q6P9A3 640 aa12.24□□□□□ -0.45
GGPS1-203ENST00000391855 FBXO38Q6PIJ6 1188 aa12.24□□□□□ -0.45
GGPS1-203ENST00000391855 CNSTQ6PJW8 725 aa12.24□□□□□ -0.45
GGPS1-203ENST00000391855 TMEM126BQ8IUX1 230 aa12.24□□□□□ -0.45
GGPS1-203ENST00000391855 FBXO15Q8NCQ5 510 aaPredicted RBP12.24□□□□□ -0.45
GGPS1-203ENST00000391855 ELMO2Q96JJ3 720 aa12.24□□□□□ -0.45
GGPS1-203ENST00000391855 PPM1MQ96MI6 270 aa12.24□□□□□ -0.45
GGPS1-203ENST00000391855 PHACTR1Q9C0D0 580 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms