RNA–Protein interactions for RNA: ENST00000389373.3

IFT88-203, Transcript of intraflagellar transport 88, humanhuman

TSL 4

Gene IFT88, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-203ENST00000389373 ITGAXP20702 1163 aa9.25□□□□□ -0.93
IFT88-203ENST00000389373 WNT3AP56704 352 aa9.25□□□□□ -0.93
IFT88-203ENST00000389373 COX15Q7KZN9 410 aa9.25□□□□□ -0.93
IFT88-203ENST00000389373 MCATQ8IVS2 390 aaKnown RBP9.25□□□□□ -0.93
IFT88-203ENST00000389373 DTX3LQ8TDB6 740 aa9.25□□□□□ -0.93
IFT88-203ENST00000389373 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.25□□□□□ -0.93
IFT88-203ENST00000389373 HAS2Q92819 552 aa9.25□□□□□ -0.93
IFT88-203ENST00000389373 TADA1Q96BN2 335 aa9.25□□□□□ -0.93
IFT88-203ENST00000389373 LINC00615Q96LM1 132 aaPredicted RBP9.25□□□□□ -0.93
IFT88-203ENST00000389373 RNF157Q96PX1 679 aa9.25□□□□□ -0.93
IFT88-203ENST00000389373 MAK16Q9BXY0 300 aaKnown RBP9.25□□□□□ -0.93
IFT88-203ENST00000389373 ISCUQ9H1K1 167 aa9.25□□□□□ -0.93
IFT88-203ENST00000389373 NUP62CLQ9H1M0 184 aa9.25□□□□□ -0.93
IFT88-203ENST00000389373 OR52A5Q9H2C5 316 aa9.25□□□□□ -0.93
IFT88-203ENST00000389373 GSX1Q9H4S2 264 aaPredicted RBP9.25□□□□□ -0.93
IFT88-203ENST00000389373 WDR54Q9H977 334 aa9.25□□□□□ -0.93
IFT88-203ENST00000389373 COG4Q9H9E3 785 aa9.25□□□□□ -0.93
IFT88-203ENST00000389373 CUTCQ9NTM9 273 aa9.25□□□□□ -0.93
IFT88-203ENST00000389373 HACD3Q9P035 362 aa9.25□□□□□ -0.93
IFT88-203ENST00000389373 FAM153AQ9UHL3 310 aa9.25□□□□□ -0.93
IFT88-203ENST00000389373 CRLS1Q9UJA2 301 aa9.25□□□□□ -0.93
IFT88-203ENST00000389373 MYO6Q9UM54 1294 aa9.25□□□□□ -0.93
IFT88-203ENST00000389373 PLAGL1Q9UM63 463 aa9.25□□□□□ -0.93
IFT88-203ENST00000389373 NF1P21359 2839 aa9.24□□□□□ -0.93
IFT88-203ENST00000389373 NSG1A0A0A6YYJ2 146 aa9.24□□□□□ -0.93
IFT88-203ENST00000389373 LOC285095A0A1B0GVY8 99 aa9.24□□□□□ -0.93
IFT88-203ENST00000389373 DSCR3O14972 297 aa9.24□□□□□ -0.93
IFT88-203ENST00000389373 PPP1R12AO14974 1030 aaPredicted RBP9.24□□□□□ -0.93
IFT88-203ENST00000389373 ZNHIT1O43257 154 aa9.24□□□□□ -0.93
IFT88-203ENST00000389373 SGTAO43765 313 aa9.24□□□□□ -0.93
IFT88-203ENST00000389373 SRP72O76094 671 aaKnown RBP9.24□□□□□ -0.93
IFT88-203ENST00000389373 WDPCPO95876 746 aa9.24□□□□□ -0.93
IFT88-203ENST00000389373 PRR35P0CG20 571 aa9.24□□□□□ -0.93
IFT88-203ENST00000389373 MYBL2P10244 700 aa9.24□□□□□ -0.93
IFT88-203ENST00000389373 KDELR1P24390 212 aa9.24□□□□□ -0.93
IFT88-203ENST00000389373 MCM3P25205 808 aa9.24□□□□□ -0.93
IFT88-203ENST00000389373 SHMT2P34897 504 aa9.24□□□□□ -0.93
IFT88-203ENST00000389373 NSG1P42857 185 aa9.24□□□□□ -0.93
IFT88-203ENST00000389373 PRLHRP49683 370 aa9.24□□□□□ -0.93
IFT88-203ENST00000389373 TAS2R40P59535 323 aa9.24□□□□□ -0.93
IFT88-203ENST00000389373 PPP2R2AP63151 447 aa9.24□□□□□ -0.93
IFT88-203ENST00000389373 BOP1Q14137 746 aaKnown RBP9.24□□□□□ -0.93
IFT88-203ENST00000389373 BRD3Q15059 726 aa9.24□□□□□ -0.93
IFT88-203ENST00000389373 NFKBIBQ15653 356 aa9.24□□□□□ -0.93
IFT88-203ENST00000389373 TEX44Q53QW1 395 aa9.24□□□□□ -0.93
IFT88-203ENST00000389373 E4F1Q66K89 784 aaPredicted RBP9.24□□□□□ -0.93
IFT88-203ENST00000389373 ARHGEF18Q6ZSZ5 1173 aa9.24□□□□□ -0.93
IFT88-203ENST00000389373 TMEM200AQ86VY9 491 aa9.24□□□□□ -0.93
IFT88-203ENST00000389373 OR5AR1Q8NGP9 310 aa9.24□□□□□ -0.93
IFT88-203ENST00000389373 DENND1AQ8TEH3 1009 aa9.24□□□□□ -0.93
IFT88-203ENST00000389373 CA5BP1Q8WTZ4 195 aa9.24□□□□□ -0.93
IFT88-203ENST00000389373 RAPGEF5Q92565 580 aa9.24□□□□□ -0.93
IFT88-203ENST00000389373 MIEF2Q96C03 454 aa9.24□□□□□ -0.93
IFT88-203ENST00000389373 SDCCAG3Q96C92 435 aa9.24□□□□□ -0.93
IFT88-203ENST00000389373 YIPF2Q9BWQ6 316 aa9.24□□□□□ -0.93
IFT88-203ENST00000389373 ENKD1Q9H0I2 346 aa9.24□□□□□ -0.93
IFT88-203ENST00000389373 TSPAN10Q9H1Z9 355 aaPredicted RBP9.24□□□□□ -0.93
IFT88-203ENST00000389373 SMOXQ9NWM0 555 aa9.24□□□□□ -0.93
IFT88-203ENST00000389373 FKBPLQ9UIM3 349 aa9.24□□□□□ -0.93
IFT88-203ENST00000389373 NXT1Q9UKK6 140 aaKnown RBP9.24□□□□□ -0.93
IFT88-203ENST00000389373 MEMO1Q9Y316 297 aa9.24□□□□□ -0.93
IFT88-203ENST00000389373 ARL5AQ9Y689 179 aa9.24□□□□□ -0.93
IFT88-203ENST00000389373 SEC16AO15027 2179 aa9.24□□□□□ -0.93
IFT88-203ENST00000389373 CCDC168Q8NDH2 2452 aa9.23□□□□□ -0.93
IFT88-203ENST00000389373 CFAP99D6REC4 459 aa9.23□□□□□ -0.93
IFT88-203ENST00000389373 APOL1O14791 398 aa9.23□□□□□ -0.93
IFT88-203ENST00000389373 PRAMEF2O60811 474 aa9.23□□□□□ -0.93
IFT88-203ENST00000389373 CELA2AP08217 269 aa9.23□□□□□ -0.93
IFT88-203ENST00000389373 ATP1B2P14415 290 aaPredicted RBP9.23□□□□□ -0.93
IFT88-203ENST00000389373 NFKB1P19838 968 aa9.23□□□□□ -0.93
IFT88-203ENST00000389373 KLK2P20151 261 aa9.23□□□□□ -0.93
IFT88-203ENST00000389373 MAGP20916 626 aa9.23□□□□□ -0.93
IFT88-203ENST00000389373 GRIA3P42263 894 aa9.23□□□□□ -0.93
IFT88-203ENST00000389373 CD151P48509 253 aa9.23□□□□□ -0.93
IFT88-203ENST00000389373 CARSP49589 748 aaKnown RBP9.23□□□□□ -0.93
IFT88-203ENST00000389373 RAB28P51157 221 aa9.23□□□□□ -0.93
IFT88-203ENST00000389373 IST1P53990 364 aa9.23□□□□□ -0.93
IFT88-203ENST00000389373 DYNLT1P63172 113 aa9.23□□□□□ -0.93
IFT88-203ENST00000389373 FANCCQ00597 558 aa9.23□□□□□ -0.93
IFT88-203ENST00000389373 OCA2Q04671 838 aa9.23□□□□□ -0.93
IFT88-203ENST00000389373 EEF1A2Q05639 463 aaKnown RBP9.23□□□□□ -0.93
IFT88-203ENST00000389373 KLC1Q07866 573 aa9.23□□□□□ -0.93
IFT88-203ENST00000389373 PDK1Q15118 436 aa9.23□□□□□ -0.93
IFT88-203ENST00000389373 SLC1A5Q15758 541 aa9.23□□□□□ -0.93
IFT88-203ENST00000389373 SLC14A2Q15849 920 aa9.23□□□□□ -0.93
IFT88-203ENST00000389373 HIBCHQ6NVY1 386 aaPredicted RBP9.23□□□□□ -0.93
IFT88-203ENST00000389373 CNSTQ6PJW8 725 aa9.23□□□□□ -0.93
IFT88-203ENST00000389373 KDELC1Q6UW63 502 aa9.23□□□□□ -0.93
IFT88-203ENST00000389373 C3P1Q6ZMU1 363 aa9.23□□□□□ -0.93
IFT88-203ENST00000389373 RFX6Q8HWS3 928 aa9.23□□□□□ -0.93
IFT88-203ENST00000389373 SPPL2CQ8IUH8 684 aa9.23□□□□□ -0.93
IFT88-203ENST00000389373 DTWD1Q8N5C7 304 aa9.23□□□□□ -0.93
IFT88-203ENST00000389373 C2orf73Q8N5S3 287 aaPredicted RBP9.23□□□□□ -0.93
IFT88-203ENST00000389373 PLD5Q8N7P1 536 aa9.23□□□□□ -0.93
IFT88-203ENST00000389373 TTC29Q8NA56 475 aaPredicted RBP9.23□□□□□ -0.93
IFT88-203ENST00000389373 IPMKQ8NFU5 416 aa9.23□□□□□ -0.93
IFT88-203ENST00000389373 OR4K2Q8NGD2 314 aa9.23□□□□□ -0.93
IFT88-203ENST00000389373 PSMF1Q92530 271 aa9.23□□□□□ -0.93
IFT88-203ENST00000389373 NRGNQ92686 78 aa9.23□□□□□ -0.93
IFT88-203ENST00000389373 FAF2Q96CS3 445 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms