RNA–Protein interactions for RNA: ENST00000381322.5

CLOCK-202, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 4,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-202ENST00000381322 NLE1Q9NVX2 485 aaPredicted RBP8.27□□□□□ -1.09
CLOCK-202ENST00000381322 TRNAU1APQ9NX07 287 aaKnown RBP8.27□□□□□ -1.09
CLOCK-202ENST00000381322 PCDHGA5Q9Y5G8 931 aa8.27□□□□□ -1.09
CLOCK-202ENST00000381322 A0A088AWK7 358 aa8.27□□□□□ -1.09
CLOCK-202ENST00000381322 EFNA1P20827 205 aaPredicted RBP8.27□□□□□ -1.09
CLOCK-202ENST00000381322 ZNF10P21506 573 aaPredicted RBP8.27□□□□□ -1.09
CLOCK-202ENST00000381322 PSMB5P28074 263 aa8.27□□□□□ -1.09
CLOCK-202ENST00000381322 SLC19A1P41440 591 aa8.27□□□□□ -1.09
CLOCK-202ENST00000381322 CSRP2Q16527 193 aa8.27□□□□□ -1.09
CLOCK-202ENST00000381322 PRAMEF17Q5VTA0 474 aa8.27□□□□□ -1.09
CLOCK-202ENST00000381322 KDELC1Q6UW63 502 aa8.27□□□□□ -1.09
CLOCK-202ENST00000381322 DNAJC14Q6Y2X3 702 aaPredicted RBP8.27□□□□□ -1.09
CLOCK-202ENST00000381322 CCNI2Q6ZMN8 369 aaPredicted RBP8.27□□□□□ -1.09
CLOCK-202ENST00000381322 DCUN1D3Q8IWE4 304 aa8.27□□□□□ -1.09
CLOCK-202ENST00000381322 SMPDL3AQ92484 453 aa8.27□□□□□ -1.09
CLOCK-202ENST00000381322 PPM1MQ96MI6 270 aa8.27□□□□□ -1.09
CLOCK-202ENST00000381322 CDK15Q96Q40 435 aa8.27□□□□□ -1.09
CLOCK-202ENST00000381322 KDM4CQ9H3R0 1056 aa8.27□□□□□ -1.09
CLOCK-202ENST00000381322 RHOJQ9H4E5 214 aa8.27□□□□□ -1.09
CLOCK-202ENST00000381322 C6orf203Q9P0P8 240 aaPredicted RBP8.27□□□□□ -1.09
CLOCK-202ENST00000381322 SLC23A2Q9UGH3 650 aa8.27□□□□□ -1.09
CLOCK-202ENST00000381322 BTRCQ9Y297 605 aa8.27□□□□□ -1.09
CLOCK-202ENST00000381322 PTRH2Q9Y3E5 179 aaKnown RBP8.27□□□□□ -1.09
CLOCK-202ENST00000381322 TIMM22Q9Y584 194 aa8.27□□□□□ -1.09
CLOCK-202ENST00000381322 PRSS21Q9Y6M0 314 aa8.27□□□□□ -1.09
CLOCK-202ENST00000381322 URADA6NGE7 173 aa8.26□□□□□ -1.09
CLOCK-202ENST00000381322 ERI3O43414 337 aaKnown RBP8.26□□□□□ -1.09
CLOCK-202ENST00000381322 CPSF4O95639 269 aaKnown RBP8.26□□□□□ -1.09
CLOCK-202ENST00000381322 KRT6AP02538 564 aa8.26□□□□□ -1.09
CLOCK-202ENST00000381322 KRT6BP04259 564 aa8.26□□□□□ -1.09
CLOCK-202ENST00000381322 IGHV4-34P06331 123 aa8.26□□□□□ -1.09
CLOCK-202ENST00000381322 ZNF806P0C7X5 589 aa8.26□□□□□ -1.09
CLOCK-202ENST00000381322 TLX1P31314 330 aaPredicted RBP8.26□□□□□ -1.09
CLOCK-202ENST00000381322 KRT6CP48668 564 aa8.26□□□□□ -1.09
CLOCK-202ENST00000381322 RPL34P49207 117 aaKnown RBP8.26□□□□□ -1.09
CLOCK-202ENST00000381322 NXPH1P58417 271 aa8.26□□□□□ -1.09
CLOCK-202ENST00000381322 CASP8Q14790 479 aa8.26□□□□□ -1.09
CLOCK-202ENST00000381322 CHI3L2Q15782 390 aa8.26□□□□□ -1.09
CLOCK-202ENST00000381322 PGS1Q32NB8 556 aa8.26□□□□□ -1.09
CLOCK-202ENST00000381322 PRAMEF13Q5VWM6 474 aa8.26□□□□□ -1.09
CLOCK-202ENST00000381322 KIAA0930Q6ICG6 404 aaPredicted RBP8.26□□□□□ -1.09
CLOCK-202ENST00000381322 LVRNQ6Q4G3 990 aa8.26□□□□□ -1.09
CLOCK-202ENST00000381322 RIPOR1Q6ZS17 1223 aa8.26□□□□□ -1.09
CLOCK-202ENST00000381322 KIAA0907Q7Z7F0 614 aaPredicted RBP8.26□□□□□ -1.09
CLOCK-202ENST00000381322 ARL10Q8N8L6 244 aa8.26□□□□□ -1.09
CLOCK-202ENST00000381322 LRRC39Q96DD0 335 aa8.26□□□□□ -1.09
CLOCK-202ENST00000381322 IER2Q9BTL4 223 aa8.26□□□□□ -1.09
CLOCK-202ENST00000381322 BRINP2Q9C0B6 783 aa8.26□□□□□ -1.09
CLOCK-202ENST00000381322 SLAMF7Q9NQ25 335 aa8.26□□□□□ -1.09
CLOCK-202ENST00000381322 ZNF71Q9NQZ8 489 aaPredicted RBP8.26□□□□□ -1.09
CLOCK-202ENST00000381322 SNX15Q9NRS6 342 aa8.26□□□□□ -1.09
CLOCK-202ENST00000381322 LOXL2Q9Y4K0 774 aa8.26□□□□□ -1.09
CLOCK-202ENST00000381322 PSAT1Q9Y617 370 aa8.26□□□□□ -1.09
CLOCK-202ENST00000381322 CKAP5Q14008 2032 aa8.26□□□□□ -1.09
CLOCK-202ENST00000381322 GLOD5A6NK44 160 aa8.26□□□□□ -1.09
CLOCK-202ENST00000381322 TNFSF14O43557 240 aa8.26□□□□□ -1.09
CLOCK-202ENST00000381322 TROVE2P10155 538 aaKnown RBP eCLIP8.26□□□□□ -1.09
CLOCK-202ENST00000381322 CPA3P15088 417 aa8.26□□□□□ -1.09
CLOCK-202ENST00000381322 CRABP2P29373 138 aa8.26□□□□□ -1.09
CLOCK-202ENST00000381322 EEF1DP29692 281 aaKnown RBP8.26□□□□□ -1.09
CLOCK-202ENST00000381322 GSCP56915 257 aaPredicted RBP8.26□□□□□ -1.09
CLOCK-202ENST00000381322 ITIH4Q14624 930 aa8.26□□□□□ -1.09
CLOCK-202ENST00000381322 AGTRAPQ6RW13 159 aa8.26□□□□□ -1.09
CLOCK-202ENST00000381322 CLNKQ7Z7G1 428 aa8.26□□□□□ -1.09
CLOCK-202ENST00000381322 CRLF3Q8IUI8 442 aa8.26□□□□□ -1.09
CLOCK-202ENST00000381322 AVL9Q8NBF6 648 aa8.26□□□□□ -1.09
CLOCK-202ENST00000381322 OR52E1Q8NGJ3 308 aa8.26□□□□□ -1.09
CLOCK-202ENST00000381322 ARL8AQ96BM9 186 aa8.26□□□□□ -1.09
CLOCK-202ENST00000381322 RBM18Q96H35 190 aaKnown RBP8.26□□□□□ -1.09
CLOCK-202ENST00000381322 PHACTR1Q9C0D0 580 aa8.26□□□□□ -1.09
CLOCK-202ENST00000381322 IL1RL2Q9HB29 575 aa8.26□□□□□ -1.09
CLOCK-202ENST00000381322 HCN3Q9P1Z3 774 aa8.26□□□□□ -1.09
CLOCK-202ENST00000381322 BCAP29Q9UHQ4 241 aa8.26□□□□□ -1.09
CLOCK-202ENST00000381322 STOML2Q9UJZ1 356 aa8.26□□□□□ -1.09
CLOCK-202ENST00000381322 OR10H1Q9Y4A9 318 aa8.26□□□□□ -1.09
CLOCK-202ENST00000381322 LMO7DNF2Z398 122 aa8.26□□□□□ -1.09
CLOCK-202ENST00000381322 H0YHG0 523 aa8.26□□□□□ -1.09
CLOCK-202ENST00000381322 SPINT1O43278 529 aa8.26□□□□□ -1.09
CLOCK-202ENST00000381322 SIX3O95343 332 aaPredicted RBP8.26□□□□□ -1.09
CLOCK-202ENST00000381322 PRLP01236 227 aa8.26□□□□□ -1.09
CLOCK-202ENST00000381322 CDH1P12830 882 aa8.26□□□□□ -1.09
CLOCK-202ENST00000381322 SHMT2P34897 504 aa8.26□□□□□ -1.09
CLOCK-202ENST00000381322 HSD17B3P37058 310 aa8.26□□□□□ -1.09
CLOCK-202ENST00000381322 CBX1P83916 185 aa8.26□□□□□ -1.09
CLOCK-202ENST00000381322 TBCCQ15814 346 aa8.26□□□□□ -1.09
CLOCK-202ENST00000381322 TMEM26Q6ZUK4 368 aa8.26□□□□□ -1.09
CLOCK-202ENST00000381322 RPS27LQ71UM5 84 aaKnown RBP8.26□□□□□ -1.09
CLOCK-202ENST00000381322 MMGT1Q8N4V1 131 aa8.26□□□□□ -1.09
CLOCK-202ENST00000381322 TMEM156Q8N614 296 aa8.26□□□□□ -1.09
CLOCK-202ENST00000381322 CLHC1Q8NHS4 586 aa8.26□□□□□ -1.09
CLOCK-202ENST00000381322 FCRL3Q96P31 734 aaPredicted RBP8.26□□□□□ -1.09
CLOCK-202ENST00000381322 OLFM3Q96PB7 478 aa8.26□□□□□ -1.09
CLOCK-202ENST00000381322 FCRL4Q96PJ5 515 aa8.26□□□□□ -1.09
CLOCK-202ENST00000381322 TCF12Q99081 682 aa8.26□□□□□ -1.09
CLOCK-202ENST00000381322 KCNH6Q9H252 994 aa8.26□□□□□ -1.09
CLOCK-202ENST00000381322 PILRBQ9UKJ0 227 aa8.26□□□□□ -1.09
CLOCK-202ENST00000381322 KIR2DS5A0A0G2JLQ3 304 aa8.25□□□□□ -1.09
CLOCK-202ENST00000381322 A0A0G2JNG1 304 aa8.25□□□□□ -1.09
CLOCK-202ENST00000381322 KIR2DS3K7RE56 304 aa8.25□□□□□ -1.09
CLOCK-202ENST00000381322 PSMD11O00231 422 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms