RNA–Protein interactions for RNA: ENST00000381140.8

GTF3A-201, Transcript of general transcription factor IIIA, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-201ENST00000381140 EPHA6Q9UF33 1036 aa18.81■□□□□ 0.6
GTF3A-201ENST00000381140 PCDHGA8Q9Y5G5 932 aa18.81■□□□□ 0.6
GTF3A-201ENST00000381140 FAM95CA0A1B0GW59 222 aa18.8■□□□□ 0.6
GTF3A-201ENST00000381140 FAM159BA6NKW6 160 aa18.8■□□□□ 0.6
GTF3A-201ENST00000381140 C1orf105O95561 183 aa18.8■□□□□ 0.6
GTF3A-201ENST00000381140 NUDT17P0C025 328 aa18.8■□□□□ 0.6
GTF3A-201ENST00000381140 KPNA2P52292 529 aaKnown RBP18.8■□□□□ 0.6
GTF3A-201ENST00000381140 TIAL1Q01085 375 aaKnown RBP eCLIP18.8■□□□□ 0.6
GTF3A-201ENST00000381140 EFTUD2Q15029 972 aaKnown RBP eCLIP18.8■□□□□ 0.6
GTF3A-201ENST00000381140 KBTBD12Q3ZCT8 623 aa18.8■□□□□ 0.6
GTF3A-201ENST00000381140 CCSMST1Q4G0I0 132 aa18.8■□□□□ 0.6
GTF3A-201ENST00000381140 PAQR3Q6TCH7 311 aa18.8■□□□□ 0.6
GTF3A-201ENST00000381140 LSMEM2Q8N112 164 aa18.8■□□□□ 0.6
GTF3A-201ENST00000381140 MRRFQ96E11 262 aaKnown RBP18.8■□□□□ 0.6
GTF3A-201ENST00000381140 PPM1MQ96MI6 270 aa18.8■□□□□ 0.6
GTF3A-201ENST00000381140 OLFM1Q99784 485 aa18.8■□□□□ 0.6
GTF3A-201ENST00000381140 RAB33BQ9H082 229 aa18.8■□□□□ 0.6
GTF3A-201ENST00000381140 KLHL42Q9P2K6 505 aa18.8■□□□□ 0.6
GTF3A-201ENST00000381140 SLC39A10Q9ULF5 831 aa18.8■□□□□ 0.6
GTF3A-201ENST00000381140 CORO1CQ9ULV4 474 aaPredicted RBP18.8■□□□□ 0.6
GTF3A-201ENST00000381140 VWA7Q9Y334 891 aa18.8■□□□□ 0.6
GTF3A-201ENST00000381140 APC2O95996 2303 aa18.79■□□□□ 0.6
GTF3A-201ENST00000381140 PIPSLA2A3N6 862 aa18.79■□□□□ 0.6
GTF3A-201ENST00000381140 SPAG6O75602 509 aa18.79■□□□□ 0.6
GTF3A-201ENST00000381140 ABHD2P08910 425 aa18.79■□□□□ 0.6
GTF3A-201ENST00000381140 FGF3P11487 239 aaPredicted RBP18.79■□□□□ 0.6
GTF3A-201ENST00000381140 ENO3P13929 434 aaPredicted RBP18.79■□□□□ 0.6
GTF3A-201ENST00000381140 CDH3P22223 829 aa18.79■□□□□ 0.6
GTF3A-201ENST00000381140 SKIV2L2P42285 1042 aaKnown RBP18.79■□□□□ 0.6
GTF3A-201ENST00000381140 ARL4DP49703 201 aa18.79■□□□□ 0.6
GTF3A-201ENST00000381140 RGS4P49798 205 aa18.79■□□□□ 0.6
GTF3A-201ENST00000381140 UBAP2Q5T6F2 1119 aaKnown RBP18.79■□□□□ 0.6
GTF3A-201ENST00000381140 LRIG3Q6UXM1 1119 aa18.79■□□□□ 0.6
GTF3A-201ENST00000381140 PRSS42Q7Z5A4 293 aa18.79■□□□□ 0.6
GTF3A-201ENST00000381140 ADGRF3Q8IZF5 1079 aa18.79■□□□□ 0.6
GTF3A-201ENST00000381140 USP7Q93009 1102 aa18.79■□□□□ 0.6
GTF3A-201ENST00000381140 RAD51AP1Q96B01 352 aa18.79■□□□□ 0.6
GTF3A-201ENST00000381140 LINGO1Q96FE5 620 aa18.79■□□□□ 0.6
GTF3A-201ENST00000381140 VPS39Q96JC1 886 aa18.79■□□□□ 0.6
GTF3A-201ENST00000381140 SLC46A1Q96NT5 459 aa18.79■□□□□ 0.6
GTF3A-201ENST00000381140 ACBD3Q9H3P7 528 aa18.79■□□□□ 0.6
GTF3A-201ENST00000381140 RHOJQ9H4E5 214 aa18.79■□□□□ 0.6
GTF3A-201ENST00000381140 ASCL3Q9NQ33 180 aa18.79■□□□□ 0.6
GTF3A-201ENST00000381140 SLC39A1Q9NY26 324 aa18.79■□□□□ 0.6
GTF3A-201ENST00000381140 ACTR10Q9NZ32 417 aa18.79■□□□□ 0.6
GTF3A-201ENST00000381140 POMT2Q9UKY4 750 aa18.79■□□□□ 0.6
GTF3A-201ENST00000381140 IGHV5-51A0A0C4DH38 117 aa18.78■□□□□ 0.6
GTF3A-201ENST00000381140 TMEM8BA6NDV4 472 aa18.78■□□□□ 0.6
GTF3A-201ENST00000381140 TLCD2A6NGC4 264 aa18.78■□□□□ 0.6
GTF3A-201ENST00000381140 ARHGEF33A8MVX0 844 aa18.78■□□□□ 0.6
GTF3A-201ENST00000381140 C2orf74A8MZ97 194 aa18.78■□□□□ 0.6
GTF3A-201ENST00000381140 MATN4O95460 622 aa18.78■□□□□ 0.6
GTF3A-201ENST00000381140 ACSL3O95573 720 aa18.78■□□□□ 0.6
GTF3A-201ENST00000381140 SYF2O95926 243 aaKnown RBP18.78■□□□□ 0.6
GTF3A-201ENST00000381140 CATP04040 527 aaKnown RBP18.78■□□□□ 0.6
GTF3A-201ENST00000381140 ITGA2BP08514 1039 aa18.78■□□□□ 0.6
GTF3A-201ENST00000381140 CHRM5P08912 532 aaPredicted RBP18.78■□□□□ 0.6
GTF3A-201ENST00000381140 ANKRD34CP0C6C1 535 aa18.78■□□□□ 0.6
GTF3A-201ENST00000381140 MPC1LP0DKB6 136 aa18.78■□□□□ 0.6
GTF3A-201ENST00000381140 CBSLP0DN79 551 aa18.78■□□□□ 0.6
GTF3A-201ENST00000381140 FDXRP22570 491 aa18.78■□□□□ 0.6
GTF3A-201ENST00000381140 PKLRP30613 574 aa18.78■□□□□ 0.6
GTF3A-201ENST00000381140 CBSP35520 551 aa18.78■□□□□ 0.6
GTF3A-201ENST00000381140 CCNFP41002 786 aa18.78■□□□□ 0.6
GTF3A-201ENST00000381140 RAB28P51157 221 aa18.78■□□□□ 0.6
GTF3A-201ENST00000381140 GRB7Q14451 532 aa18.78■□□□□ 0.6
GTF3A-201ENST00000381140 TBC1D25Q3MII6 688 aa18.78■□□□□ 0.6
GTF3A-201ENST00000381140 NEK10Q6ZWH5 1172 aa18.78■□□□□ 0.6
GTF3A-201ENST00000381140 TRIM73Q86UV7 250 aa18.78■□□□□ 0.6
GTF3A-201ENST00000381140 MAGEC3Q8TD91 643 aa18.78■□□□□ 0.6
GTF3A-201ENST00000381140 EEF1AKMT1Q8WVE0 214 aa18.78■□□□□ 0.6
GTF3A-201ENST00000381140 CD180Q99467 661 aa18.78■□□□□ 0.6
GTF3A-201ENST00000381140 CPNE1Q99829 537 aa18.78■□□□□ 0.6
GTF3A-201ENST00000381140 KLHL25Q9H0H3 589 aa18.78■□□□□ 0.6
GTF3A-201ENST00000381140 ZNF768Q9H5H4 540 aaKnown RBP18.78■□□□□ 0.6
GTF3A-201ENST00000381140 THSD1Q9NS62 852 aa18.78■□□□□ 0.6
GTF3A-201ENST00000381140 SPHK1Q9NYA1 384 aa18.78■□□□□ 0.6
GTF3A-201ENST00000381140 ISM1B1AKI9 464 aa18.77■□□□□ 0.6
GTF3A-201ENST00000381140 MATN2O00339 956 aa18.77■□□□□ 0.6
GTF3A-201ENST00000381140 TOX3O15405 576 aaPredicted RBP18.77■□□□□ 0.6
GTF3A-201ENST00000381140 FAM155BO75949 473 aa18.77■□□□□ 0.6
GTF3A-201ENST00000381140 PHBP35232 272 aa18.77■□□□□ 0.6
GTF3A-201ENST00000381140 GP5P40197 560 aa18.77■□□□□ 0.6
GTF3A-201ENST00000381140 SLC12A2P55011 1212 aa18.77■□□□□ 0.6
GTF3A-201ENST00000381140 SH3BP2P78314 561 aa18.77■□□□□ 0.6
GTF3A-201ENST00000381140 FOXM1Q08050 763 aa18.77■□□□□ 0.6
GTF3A-201ENST00000381140 ZNF460Q14592 562 aa18.77■□□□□ 0.6
GTF3A-201ENST00000381140 KCNAB1Q14722 419 aa18.77■□□□□ 0.6
GTF3A-201ENST00000381140 EEF1AKMT2Q5JPI9 291 aaKnown RBP18.77■□□□□ 0.6
GTF3A-201ENST00000381140 MYO1HQ8N1T3 1032 aa18.77■□□□□ 0.6
GTF3A-201ENST00000381140 RAB42Q8N4Z0 105 aa18.77■□□□□ 0.6
GTF3A-201ENST00000381140 PMEPA1Q969W9 287 aa18.77■□□□□ 0.6
GTF3A-201ENST00000381140 ZNF578Q96N58 590 aaPredicted RBP18.77■□□□□ 0.6
GTF3A-201ENST00000381140 ZIM3Q96PE6 472 aa18.77■□□□□ 0.6
GTF3A-201ENST00000381140 CTRCQ99895 268 aa18.77■□□□□ 0.6
GTF3A-201ENST00000381140 WDR70Q9NW82 654 aa18.77■□□□□ 0.6
GTF3A-201ENST00000381140 SOHLH2Q9NX45 425 aa18.77■□□□□ 0.6
GTF3A-201ENST00000381140 OR6C2Q9NZP2 312 aa18.77■□□□□ 0.6
GTF3A-201ENST00000381140 PLAAQ9Y263 795 aa18.77■□□□□ 0.6
GTF3A-201ENST00000381140 MTO1Q9Y2Z2 717 aaKnown RBP18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms