RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 SPANXN4Q5MJ08 99 aa12.21□□□□□ -0.46
PRPF40B-202ENST00000380281 LCN8Q6JVE9 175 aa12.21□□□□□ -0.46
PRPF40B-202ENST00000380281 CYP20A1Q6UW02 462 aa12.21□□□□□ -0.46
PRPF40B-202ENST00000380281 TMEM199Q8N511 208 aa12.21□□□□□ -0.46
PRPF40B-202ENST00000380281 OR56A4Q8NGH8 313 aa12.21□□□□□ -0.46
PRPF40B-202ENST00000380281 KIAA1191Q96A73 305 aa12.21□□□□□ -0.46
PRPF40B-202ENST00000380281 CCDC177Q9NQR7 707 aaPredicted RBP12.21□□□□□ -0.46
PRPF40B-202ENST00000380281 PAQR5Q9NXK6 330 aaPredicted RBP12.21□□□□□ -0.46
PRPF40B-202ENST00000380281 A0A0C4DFX4 3053 aa12.21□□□□□ -0.46
PRPF40B-202ENST00000380281 OTOFQ9HC10 1997 aa12.21□□□□□ -0.46
PRPF40B-202ENST00000380281 NDUFS2O75306 463 aa12.2□□□□□ -0.46
PRPF40B-202ENST00000380281 HSD17B1P14061 328 aa12.2□□□□□ -0.46
PRPF40B-202ENST00000380281 DDX39BQ13838 428 aaKnown RBP12.2□□□□□ -0.46
PRPF40B-202ENST00000380281 NKG7Q16617 165 aa12.2□□□□□ -0.46
PRPF40B-202ENST00000380281 CDONQ4KMG0 1287 aa12.2□□□□□ -0.46
PRPF40B-202ENST00000380281 CCBE1Q6UXH8 406 aaPredicted RBP12.2□□□□□ -0.46
PRPF40B-202ENST00000380281 RASAL3Q86YV0 1011 aa12.2□□□□□ -0.46
PRPF40B-202ENST00000380281 SYTL1Q8IYJ3 562 aa12.2□□□□□ -0.46
PRPF40B-202ENST00000380281 TRPV1Q8NER1 839 aa12.2□□□□□ -0.46
PRPF40B-202ENST00000380281 RPL3LQ92901 407 aaKnown RBP12.2□□□□□ -0.46
PRPF40B-202ENST00000380281 BTN2A3PQ96KV6 586 aa12.2□□□□□ -0.46
PRPF40B-202ENST00000380281 GPR62Q9BZJ7 368 aa12.2□□□□□ -0.46
PRPF40B-202ENST00000380281 ARNT2Q9HBZ2 717 aa12.2□□□□□ -0.46
PRPF40B-202ENST00000380281 MRM3Q9HC36 420 aaKnown RBP12.2□□□□□ -0.46
PRPF40B-202ENST00000380281 AIG1Q9NVV5 245 aa12.2□□□□□ -0.46
PRPF40B-202ENST00000380281 COQ3Q9NZJ6 369 aa12.2□□□□□ -0.46
PRPF40B-202ENST00000380281 PCTPQ9UKL6 214 aa12.2□□□□□ -0.46
PRPF40B-202ENST00000380281 FCF1Q9Y324 198 aaKnown RBP12.2□□□□□ -0.46
PRPF40B-202ENST00000380281 NYNRINQ9P2P1 1898 aaKnown RBP12.2□□□□□ -0.46
PRPF40B-202ENST00000380281 BBIP1A8MTZ0 92 aa12.2□□□□□ -0.46
PRPF40B-202ENST00000380281 G3V2T6 193 aa12.2□□□□□ -0.46
PRPF40B-202ENST00000380281 K7ERQ8 282 aa12.2□□□□□ -0.46
PRPF40B-202ENST00000380281 NDST3O95803 873 aa12.2□□□□□ -0.46
PRPF40B-202ENST00000380281 FGF1P05230 155 aa12.2□□□□□ -0.46
PRPF40B-202ENST00000380281 TACR2P21452 398 aa12.2□□□□□ -0.46
PRPF40B-202ENST00000380281 EIF2DP41214 584 aaKnown RBP12.2□□□□□ -0.46
PRPF40B-202ENST00000380281 TUBA1BP68363 451 aa12.2□□□□□ -0.46
PRPF40B-202ENST00000380281 PCBP1Q15365 356 aaKnown RBP eCLIP12.2□□□□□ -0.46
PRPF40B-202ENST00000380281 TUBA1AQ71U36 451 aa12.2□□□□□ -0.46
PRPF40B-202ENST00000380281 DET1Q7L5Y6 550 aa12.2□□□□□ -0.46
PRPF40B-202ENST00000380281 GALNT12Q8IXK2 581 aa12.2□□□□□ -0.46
PRPF40B-202ENST00000380281 OR2T12Q8NG77 320 aa12.2□□□□□ -0.46
PRPF40B-202ENST00000380281 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.2□□□□□ -0.46
PRPF40B-202ENST00000380281 ZNF599Q96NL3 588 aa12.2□□□□□ -0.46
PRPF40B-202ENST00000380281 FEM1AQ9BSK4 669 aa12.2□□□□□ -0.46
PRPF40B-202ENST00000380281 ZNF717Q9BY31 904 aaPredicted RBP12.2□□□□□ -0.46
PRPF40B-202ENST00000380281 CIPCQ9C0C6 399 aa12.2□□□□□ -0.46
PRPF40B-202ENST00000380281 DSN1Q9H410 356 aa12.2□□□□□ -0.46
PRPF40B-202ENST00000380281 TMEM248Q9NWD8 314 aa12.2□□□□□ -0.46
PRPF40B-202ENST00000380281 UBA2Q9UBT2 640 aaPredicted RBP12.2□□□□□ -0.46
PRPF40B-202ENST00000380281 RAI2Q9Y5P3 530 aa12.2□□□□□ -0.46
PRPF40B-202ENST00000380281 MAU2Q9Y6X3 613 aa12.2□□□□□ -0.46
PRPF40B-202ENST00000380281 A0A0G2JMZ2 1700 aa12.2□□□□□ -0.46
PRPF40B-202ENST00000380281 LRRC37A2A6NM11 1700 aa12.2□□□□□ -0.46
PRPF40B-202ENST00000380281 A0A0U1RQF3 1178 aa12.2□□□□□ -0.46
PRPF40B-202ENST00000380281 LOC285095A0A1B0GVY8 99 aa12.2□□□□□ -0.46
PRPF40B-202ENST00000380281 SYCE1LA8MT33 242 aa12.2□□□□□ -0.46
PRPF40B-202ENST00000380281 UPK1BO75841 260 aa12.2□□□□□ -0.46
PRPF40B-202ENST00000380281 THRBP10828 461 aa12.2□□□□□ -0.46
PRPF40B-202ENST00000380281 ELNP15502 786 aa12.2□□□□□ -0.46
PRPF40B-202ENST00000380281 MAP2K4P45985 399 aa12.2□□□□□ -0.46
PRPF40B-202ENST00000380281 PPP5CP53041 499 aa12.2□□□□□ -0.46
PRPF40B-202ENST00000380281 GPLD1P80108 840 aa12.2□□□□□ -0.46
PRPF40B-202ENST00000380281 TSTA3Q13630 321 aaPredicted RBP12.2□□□□□ -0.46
PRPF40B-202ENST00000380281 SF1Q15637 639 aaKnown RBP12.2□□□□□ -0.46
PRPF40B-202ENST00000380281 SPRYD7Q5W111 196 aa12.2□□□□□ -0.46
PRPF40B-202ENST00000380281 TBC1D21Q8IYX1 336 aa12.2□□□□□ -0.46
PRPF40B-202ENST00000380281 UBE2FQ969M7 185 aa12.2□□□□□ -0.46
PRPF40B-202ENST00000380281 ULK4Q96C45 1275 aa12.2□□□□□ -0.46
PRPF40B-202ENST00000380281 VPS35Q96QK1 796 aa12.2□□□□□ -0.46
PRPF40B-202ENST00000380281 SGIP1Q9BQI5 828 aa12.2□□□□□ -0.46
PRPF40B-202ENST00000380281 RIBC2Q9H4K1 309 aa12.2□□□□□ -0.46
PRPF40B-202ENST00000380281 TFB2MQ9H5Q4 396 aaKnown RBP12.2□□□□□ -0.46
PRPF40B-202ENST00000380281 ABCD2Q9UBJ2 740 aa12.2□□□□□ -0.46
PRPF40B-202ENST00000380281 SNX5Q9Y5X3 404 aa12.2□□□□□ -0.46
PRPF40B-202ENST00000380281 PDZK1P1A8MUH7 402 aa12.19□□□□□ -0.46
PRPF40B-202ENST00000380281 AQP1P29972 269 aa12.19□□□□□ -0.46
PRPF40B-202ENST00000380281 DGKEP52429 567 aa12.19□□□□□ -0.46
PRPF40B-202ENST00000380281 CDC20Q12834 499 aa12.19□□□□□ -0.46
PRPF40B-202ENST00000380281 KCNAB2Q13303 367 aa12.19□□□□□ -0.46
PRPF40B-202ENST00000380281 RCAN2Q14206 197 aa12.19□□□□□ -0.46
PRPF40B-202ENST00000380281 TAF12Q16514 161 aa12.19□□□□□ -0.46
PRPF40B-202ENST00000380281 FAM98BQ52LJ0 330 aaKnown RBP12.19□□□□□ -0.46
PRPF40B-202ENST00000380281 C8orf82Q6P1X6 216 aaPredicted RBP12.19□□□□□ -0.46
PRPF40B-202ENST00000380281 PRMT9Q6P2P2 845 aa12.19□□□□□ -0.46
PRPF40B-202ENST00000380281 TRAF7Q6Q0C0 670 aa12.19□□□□□ -0.46
PRPF40B-202ENST00000380281 RSPO2Q6UXX9 243 aaPredicted RBP12.19□□□□□ -0.46
PRPF40B-202ENST00000380281 USP50Q70EL3 339 aaPredicted RBP12.19□□□□□ -0.46
PRPF40B-202ENST00000380281 CARNMT1Q8N4J0 409 aa12.19□□□□□ -0.46
PRPF40B-202ENST00000380281 ESX1Q8N693 406 aa12.19□□□□□ -0.46
PRPF40B-202ENST00000380281 RHOXF1Q8NHV9 184 aa12.19□□□□□ -0.46
PRPF40B-202ENST00000380281 YTHDF1Q9BYJ9 559 aaKnown RBP12.19□□□□□ -0.46
PRPF40B-202ENST00000380281 SP140LQ9H930 580 aa12.19□□□□□ -0.46
PRPF40B-202ENST00000380281 NTN4Q9HB63 628 aa12.19□□□□□ -0.46
PRPF40B-202ENST00000380281 FBXO8Q9NRD0 319 aa12.19□□□□□ -0.46
PRPF40B-202ENST00000380281 SLC6A13Q9NSD5 602 aa12.19□□□□□ -0.46
PRPF40B-202ENST00000380281 PCDHB5Q9Y5E4 795 aa12.19□□□□□ -0.46
PRPF40B-202ENST00000380281 TBKBP1A7MCY6 615 aa12.19□□□□□ -0.46
PRPF40B-202ENST00000380281 ARHGAP33O14559 1287 aa12.19□□□□□ -0.46
PRPF40B-202ENST00000380281 GPIP06744 558 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms