RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 POP4O95707 220 aaKnown RBP7.33□□□□□ -1.24
CDKL5-201ENST00000379989 ALDH1A1P00352 501 aa7.33□□□□□ -1.24
CDKL5-201ENST00000379989 CYBBP04839 570 aa7.33□□□□□ -1.24
CDKL5-201ENST00000379989 GPIP06744 558 aa7.33□□□□□ -1.24
CDKL5-201ENST00000379989 MMP3P08254 477 aa7.33□□□□□ -1.24
CDKL5-201ENST00000379989 INSRRP14616 1297 aa7.33□□□□□ -1.24
CDKL5-201ENST00000379989 ARSAP15289 507 aa7.33□□□□□ -1.24
CDKL5-201ENST00000379989 CNTFP26441 200 aa7.33□□□□□ -1.24
CDKL5-201ENST00000379989 HOXC8P31273 242 aa7.33□□□□□ -1.24
CDKL5-201ENST00000379989 KPNA2P52292 529 aaKnown RBP7.33□□□□□ -1.24
CDKL5-201ENST00000379989 SREBF2Q12772 1141 aa7.33□□□□□ -1.24
CDKL5-201ENST00000379989 FLYWCH1Q4VC44 716 aa7.33□□□□□ -1.24
CDKL5-201ENST00000379989 XKR4Q5GH76 650 aa7.33□□□□□ -1.24
CDKL5-201ENST00000379989 GPR139Q6DWJ6 353 aa7.33□□□□□ -1.24
CDKL5-201ENST00000379989 NOTUMQ6P988 496 aa7.33□□□□□ -1.24
CDKL5-201ENST00000379989 SLC27A1Q6PCB7 646 aa7.33□□□□□ -1.24
CDKL5-201ENST00000379989 C5orf46Q6UWT4 87 aa7.33□□□□□ -1.24
CDKL5-201ENST00000379989 STK32CQ86UX6 486 aa7.33□□□□□ -1.24
CDKL5-201ENST00000379989 RASAL3Q86YV0 1011 aa7.33□□□□□ -1.24
CDKL5-201ENST00000379989 UNC5BQ8IZJ1 945 aa7.33□□□□□ -1.24
CDKL5-201ENST00000379989 RDH10Q8IZV5 341 aa7.33□□□□□ -1.24
CDKL5-201ENST00000379989 AMER2Q8N7J2 671 aa7.33□□□□□ -1.24
CDKL5-201ENST00000379989 GANCQ8TET4 914 aa7.33□□□□□ -1.24
CDKL5-201ENST00000379989 HEXDCQ8WVB3 486 aa7.33□□□□□ -1.24
CDKL5-201ENST00000379989 PYCR2Q96C36 320 aa7.33□□□□□ -1.24
CDKL5-201ENST00000379989 MFSD3Q96ES6 412 aa7.33□□□□□ -1.24
CDKL5-201ENST00000379989 LRCH3Q96II8 777 aa7.33□□□□□ -1.24
CDKL5-201ENST00000379989 MBOAT4Q96T53 435 aa7.33□□□□□ -1.24
CDKL5-201ENST00000379989 MNTQ99583 582 aa7.33□□□□□ -1.24
CDKL5-201ENST00000379989 XYLT2Q9H1B5 865 aa7.33□□□□□ -1.24
CDKL5-201ENST00000379989 TRIM45Q9H8W5 580 aaPredicted RBP7.33□□□□□ -1.24
CDKL5-201ENST00000379989 XPNPEP3Q9NQH7 507 aa7.33□□□□□ -1.24
CDKL5-201ENST00000379989 CISHQ9NSE2 258 aa7.33□□□□□ -1.24
CDKL5-201ENST00000379989 CCDC167Q9P0B6 97 aa7.33□□□□□ -1.24
CDKL5-201ENST00000379989 PEX16Q9Y5Y5 336 aa7.33□□□□□ -1.24
CDKL5-201ENST00000379989 TMEM150BA6NC51 233 aa7.33□□□□□ -1.24
CDKL5-201ENST00000379989 ARPC2O15144 300 aa7.33□□□□□ -1.24
CDKL5-201ENST00000379989 KCNC1P48547 511 aa7.33□□□□□ -1.24
CDKL5-201ENST00000379989 EPHA5P54756 1037 aa7.33□□□□□ -1.24
CDKL5-201ENST00000379989 ISL1P61371 349 aa7.33□□□□□ -1.24
CDKL5-201ENST00000379989 RPL7AP62424 266 aaKnown RBP7.33□□□□□ -1.24
CDKL5-201ENST00000379989 PTPN11Q06124 597 aaPredicted RBP7.33□□□□□ -1.24
CDKL5-201ENST00000379989 ZNF252P-AS1Q0IIN9 211 aa7.33□□□□□ -1.24
CDKL5-201ENST00000379989 TMEM132DQ14C87 1099 aa7.33□□□□□ -1.24
CDKL5-201ENST00000379989 SMAD2Q15796 467 aaKnown RBP7.33□□□□□ -1.24
CDKL5-201ENST00000379989 TAZQ16635 292 aa7.33□□□□□ -1.24
CDKL5-201ENST00000379989 TTC23Q5W5X9 447 aa7.33□□□□□ -1.24
CDKL5-201ENST00000379989 ARHGAP17Q68EM7 881 aa7.33□□□□□ -1.24
CDKL5-201ENST00000379989 KDM4DQ6B0I6 523 aa7.33□□□□□ -1.24
CDKL5-201ENST00000379989 DNAJC24Q6P3W2 148 aa7.33□□□□□ -1.24
CDKL5-201ENST00000379989 TMEM270Q6UE05 265 aa7.33□□□□□ -1.24
CDKL5-201ENST00000379989 PLD6Q8N2A8 252 aaKnown RBP7.33□□□□□ -1.24
CDKL5-201ENST00000379989 PELI3Q8N2H9 469 aa7.33□□□□□ -1.24
CDKL5-201ENST00000379989 ATG16L2Q8NAA4 619 aa7.33□□□□□ -1.24
CDKL5-201ENST00000379989 RDH11Q8TC12 318 aa7.33□□□□□ -1.24
CDKL5-201ENST00000379989 FRMD6Q96NE9 622 aa7.33□□□□□ -1.24
CDKL5-201ENST00000379989 TTLL2Q9BWV7 592 aa7.33□□□□□ -1.24
CDKL5-201ENST00000379989 SORBS1Q9BX66 1292 aaKnown RBP7.33□□□□□ -1.24
CDKL5-201ENST00000379989 HEXA-AS1Q9H8Q6 139 aa7.33□□□□□ -1.24
CDKL5-201ENST00000379989 UCK1Q9HA47 277 aa7.33□□□□□ -1.24
CDKL5-201ENST00000379989 PRDM9Q9NQV7 894 aa7.33□□□□□ -1.24
CDKL5-201ENST00000379989 CASP8AP2Q9UKL3 1982 aa7.32□□□□□ -1.24
CDKL5-201ENST00000379989 TCRBV5S2A0A599 114 aa7.32□□□□□ -1.24
CDKL5-201ENST00000379989 C3orf70A6NLC5 250 aaPredicted RBP7.32□□□□□ -1.24
CDKL5-201ENST00000379989 UPK1AO00322 258 aa7.32□□□□□ -1.24
CDKL5-201ENST00000379989 INPP4BO15327 924 aa7.32□□□□□ -1.24
CDKL5-201ENST00000379989 CHADO15335 359 aa7.32□□□□□ -1.24
CDKL5-201ENST00000379989 CST8O60676 142 aa7.32□□□□□ -1.24
CDKL5-201ENST00000379989 NUP62P37198 522 aaPredicted RBP7.32□□□□□ -1.24
CDKL5-201ENST00000379989 FCGRTP55899 365 aa7.32□□□□□ -1.24
CDKL5-201ENST00000379989 YBX1P67809 324 aaKnown RBP7.32□□□□□ -1.24
CDKL5-201ENST00000379989 TAB1Q15750 504 aa7.32□□□□□ -1.24
CDKL5-201ENST00000379989 BAK1Q16611 211 aa7.32□□□□□ -1.24
CDKL5-201ENST00000379989 AGKQ53H12 422 aa7.32□□□□□ -1.24
CDKL5-201ENST00000379989 BEND4Q6ZU67 534 aa7.32□□□□□ -1.24
CDKL5-201ENST00000379989 VWA5B2Q8N398 1253 aa7.32□□□□□ -1.24
CDKL5-201ENST00000379989 PAPD5Q8NDF8 572 aaKnown RBP7.32□□□□□ -1.24
CDKL5-201ENST00000379989 NLGN4YQ8NFZ3 816 aaPredicted RBP7.32□□□□□ -1.24
CDKL5-201ENST00000379989 OR6J1Q8NGC5 347 aa7.32□□□□□ -1.24
CDKL5-201ENST00000379989 CNIH3Q8TBE1 160 aa7.32□□□□□ -1.24
CDKL5-201ENST00000379989 STON2Q8WXE9 905 aa7.32□□□□□ -1.24
CDKL5-201ENST00000379989 FAF2Q96CS3 445 aa7.32□□□□□ -1.24
CDKL5-201ENST00000379989 AURKBQ96GD4 344 aaPredicted RBP7.32□□□□□ -1.24
CDKL5-201ENST00000379989 CPB2Q96IY4 423 aa7.32□□□□□ -1.24
CDKL5-201ENST00000379989 HAPLN2Q9GZV7 340 aa7.32□□□□□ -1.24
CDKL5-201ENST00000379989 SETD4Q9NVD3 440 aa7.32□□□□□ -1.24
CDKL5-201ENST00000379989 MUTYHQ9UIF7 546 aa7.32□□□□□ -1.24
CDKL5-201ENST00000379989 UBQLN1Q9UMX0 589 aaKnown RBP7.32□□□□□ -1.24
CDKL5-201ENST00000379989 EDARQ9UNE0 448 aa7.32□□□□□ -1.24
CDKL5-201ENST00000379989 ZFR2Q9UPR6 939 aaKnown RBP7.32□□□□□ -1.24
CDKL5-201ENST00000379989 HES2Q9Y543 173 aa7.32□□□□□ -1.24
CDKL5-201ENST00000379989 TRBV23-1A0A0A0MS06 115 aa7.32□□□□□ -1.24
CDKL5-201ENST00000379989 A0A1B0GVM2 712 aa7.32□□□□□ -1.24
CDKL5-201ENST00000379989 SLC22A23A1A5C7 686 aa7.32□□□□□ -1.24
CDKL5-201ENST00000379989 AGRPO00253 132 aa7.32□□□□□ -1.24
CDKL5-201ENST00000379989 ABCD4O14678 606 aa7.32□□□□□ -1.24
CDKL5-201ENST00000379989 EIF1BO60739 113 aaKnown RBP7.32□□□□□ -1.24
CDKL5-201ENST00000379989 TRIM13O60858 407 aa7.32□□□□□ -1.24
CDKL5-201ENST00000379989 CILPO75339 1184 aa7.32□□□□□ -1.24
CDKL5-201ENST00000379989 FADS2O95864 444 aaKnown RBP7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms