RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 MFSD4AQ8N468 514 aa11.56□□□□□ -0.56
NPHP4-202ENST00000378161 PPHLN1Q8NEY8 458 aaKnown RBP11.56□□□□□ -0.56
NPHP4-202ENST00000378161 MUL1Q969V5 352 aa11.56□□□□□ -0.56
NPHP4-202ENST00000378161 DNTTIP1Q9H147 329 aa11.56□□□□□ -0.56
NPHP4-202ENST00000378161 REEP4Q9H6H4 257 aa11.56□□□□□ -0.56
NPHP4-202ENST00000378161 GPATCH2LQ9NWQ4 482 aa11.56□□□□□ -0.56
NPHP4-202ENST00000378161 SDHAF2Q9NX18 166 aa11.56□□□□□ -0.56
NPHP4-202ENST00000378161 ATXN7L1Q9ULK2 861 aaPredicted RBP11.56□□□□□ -0.56
NPHP4-202ENST00000378161 TLR6Q9Y2C9 796 aa11.56□□□□□ -0.56
NPHP4-202ENST00000378161 TEX13CA0A0J9YWL9 993 aa11.55□□□□□ -0.56
NPHP4-202ENST00000378161 FAM155AB1AL88 458 aaPredicted RBP11.55□□□□□ -0.56
NPHP4-202ENST00000378161 SULT1C2O00338 296 aa11.55□□□□□ -0.56
NPHP4-202ENST00000378161 TLL1O43897 1013 aa11.55□□□□□ -0.56
NPHP4-202ENST00000378161 GUCA1CO95843 209 aa11.55□□□□□ -0.56
NPHP4-202ENST00000378161 ZP3P21754 424 aa11.55□□□□□ -0.56
NPHP4-202ENST00000378161 TM4SF1P30408 202 aa11.55□□□□□ -0.56
NPHP4-202ENST00000378161 VEGFCP49767 419 aa11.55□□□□□ -0.56
NPHP4-202ENST00000378161 ARSFP54793 590 aa11.55□□□□□ -0.56
NPHP4-202ENST00000378161 GMFBP60983 142 aa11.55□□□□□ -0.56
NPHP4-202ENST00000378161 ORC1Q13415 861 aa11.55□□□□□ -0.56
NPHP4-202ENST00000378161 MED22Q15528 200 aa11.55□□□□□ -0.56
NPHP4-202ENST00000378161 NAPEPLDQ6IQ20 393 aa11.55□□□□□ -0.56
NPHP4-202ENST00000378161 TMEM65Q6PI78 240 aa11.55□□□□□ -0.56
NPHP4-202ENST00000378161 DNAJB14Q8TBM8 379 aa11.55□□□□□ -0.56
NPHP4-202ENST00000378161 SLC22A17Q8WUG5 538 aa11.55□□□□□ -0.56
NPHP4-202ENST00000378161 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.55□□□□□ -0.56
NPHP4-202ENST00000378161 SCUBE2Q9NQ36 999 aa11.55□□□□□ -0.56
NPHP4-202ENST00000378161 XPNPEP3Q9NQH7 507 aa11.55□□□□□ -0.56
NPHP4-202ENST00000378161 AASSQ9UDR5 926 aa11.55□□□□□ -0.56
NPHP4-202ENST00000378161 FKBP7Q9Y680 259 aa11.55□□□□□ -0.56
NPHP4-202ENST00000378161 SNCAIPQ9Y6H5 919 aa11.55□□□□□ -0.56
NPHP4-202ENST00000378161 A0A096LPK6 155 aa11.55□□□□□ -0.56
NPHP4-202ENST00000378161 RAB3DO95716 219 aa11.55□□□□□ -0.56
NPHP4-202ENST00000378161 SMIM6P0DI80 62 aa11.55□□□□□ -0.56
NPHP4-202ENST00000378161 PCSK2P16519 638 aa11.55□□□□□ -0.56
NPHP4-202ENST00000378161 TFEBP19484 476 aa11.55□□□□□ -0.56
NPHP4-202ENST00000378161 PROZP22891 400 aa11.55□□□□□ -0.56
NPHP4-202ENST00000378161 GLRBP48167 497 aa11.55□□□□□ -0.56
NPHP4-202ENST00000378161 RORCP51449 518 aa11.55□□□□□ -0.56
NPHP4-202ENST00000378161 IL18Q14116 193 aa11.55□□□□□ -0.56
NPHP4-202ENST00000378161 TATDN3Q17R31 274 aa11.55□□□□□ -0.56
NPHP4-202ENST00000378161 TNS4Q8IZW8 715 aa11.55□□□□□ -0.56
NPHP4-202ENST00000378161 CENPIQ92674 756 aaPredicted RBP11.55□□□□□ -0.56
NPHP4-202ENST00000378161 TSPAN17Q96FV3 270 aa11.55□□□□□ -0.56
NPHP4-202ENST00000378161 BTBD1Q9H0C5 482 aa11.55□□□□□ -0.56
NPHP4-202ENST00000378161 AP5M1Q9H0R1 490 aa11.55□□□□□ -0.56
NPHP4-202ENST00000378161 CRISPLD1Q9H336 500 aa11.55□□□□□ -0.56
NPHP4-202ENST00000378161 ST6GALNAC4Q9H4F1 302 aa11.55□□□□□ -0.56
NPHP4-202ENST00000378161 CATSPERBQ9H7T0 1116 aa11.55□□□□□ -0.56
NPHP4-202ENST00000378161 ZFP14Q9HCL3 533 aa11.55□□□□□ -0.56
NPHP4-202ENST00000378161 PGAP2Q9UHJ9 254 aa11.55□□□□□ -0.56
NPHP4-202ENST00000378161 LINC00862A6NCI5 91 aa11.55□□□□□ -0.56
NPHP4-202ENST00000378161 CHADO15335 359 aa11.55□□□□□ -0.56
NPHP4-202ENST00000378161 SBK2P0C263 348 aa11.55□□□□□ -0.56
NPHP4-202ENST00000378161 CYP4B1P13584 511 aa11.55□□□□□ -0.56
NPHP4-202ENST00000378161 TSPAN5P62079 268 aa11.55□□□□□ -0.56
NPHP4-202ENST00000378161 RPL7AP62424 266 aaKnown RBP11.55□□□□□ -0.56
NPHP4-202ENST00000378161 RELQ04864 619 aaPredicted RBP11.55□□□□□ -0.56
NPHP4-202ENST00000378161 SLAMF1Q13291 335 aa11.55□□□□□ -0.56
NPHP4-202ENST00000378161 ATP6AP1Q15904 470 aa11.55□□□□□ -0.56
NPHP4-202ENST00000378161 AVPI1Q5T686 147 aa11.55□□□□□ -0.56
NPHP4-202ENST00000378161 TMEM198Q66K66 360 aa11.55□□□□□ -0.56
NPHP4-202ENST00000378161 DEF8Q6ZN54 512 aa11.55□□□□□ -0.56
NPHP4-202ENST00000378161 SLC16A13Q7RTY0 426 aa11.55□□□□□ -0.56
NPHP4-202ENST00000378161 KRT77Q7Z794 578 aa11.55□□□□□ -0.56
NPHP4-202ENST00000378161 TCEAL4Q96EI5 215 aa11.55□□□□□ -0.56
NPHP4-202ENST00000378161 ZBTB45Q96K62 511 aaPredicted RBP11.55□□□□□ -0.56
NPHP4-202ENST00000378161 DCLRE1CQ96SD1 692 aaKnown RBP11.55□□□□□ -0.56
NPHP4-202ENST00000378161 THUMPD3Q9BV44 507 aaKnown RBP11.55□□□□□ -0.56
NPHP4-202ENST00000378161 SIK2Q9H0K1 926 aa11.55□□□□□ -0.56
NPHP4-202ENST00000378161 RASSF1Q9NS23 344 aa11.55□□□□□ -0.56
NPHP4-202ENST00000378161 AJAP1Q9UKB5 411 aaPredicted RBP11.55□□□□□ -0.56
NPHP4-202ENST00000378161 CRYL1Q9Y2S2 319 aa11.55□□□□□ -0.56
NPHP4-202ENST00000378161 RTCAO00442 366 aaKnown RBP11.54□□□□□ -0.56
NPHP4-202ENST00000378161 SETD1AO15047 1707 aaKnown RBP11.54□□□□□ -0.56
NPHP4-202ENST00000378161 ZBTB14O43829 449 aa11.54□□□□□ -0.56
NPHP4-202ENST00000378161 UGT2B17O75795 530 aa11.54□□□□□ -0.56
NPHP4-202ENST00000378161 ALDH1A2O94788 518 aa11.54□□□□□ -0.56
NPHP4-202ENST00000378161 C2P06681 752 aa11.54□□□□□ -0.56
NPHP4-202ENST00000378161 SLURP2P0DP57 97 aa11.54□□□□□ -0.56
NPHP4-202ENST00000378161 TSPAN8P19075 237 aa11.54□□□□□ -0.56
NPHP4-202ENST00000378161 SDC2P34741 201 aa11.54□□□□□ -0.56
NPHP4-202ENST00000378161 CA5AP35218 305 aa11.54□□□□□ -0.56
NPHP4-202ENST00000378161 ASMTP46597 345 aa11.54□□□□□ -0.56
NPHP4-202ENST00000378161 AFF1P51825 1210 aaKnown RBP11.54□□□□□ -0.56
NPHP4-202ENST00000378161 ZNF273Q14593 569 aa11.54□□□□□ -0.56
NPHP4-202ENST00000378161 TUSC1Q2TAM9 212 aa11.54□□□□□ -0.56
NPHP4-202ENST00000378161 TIGD3Q6B0B8 471 aa11.54□□□□□ -0.56
NPHP4-202ENST00000378161 USP45Q70EL2 814 aa11.54□□□□□ -0.56
NPHP4-202ENST00000378161 PROSER1Q86XN7 944 aa11.54□□□□□ -0.56
NPHP4-202ENST00000378161 SIAH1Q8IUQ4 282 aa11.54□□□□□ -0.56
NPHP4-202ENST00000378161 C11orf65Q8NCR3 313 aa11.54□□□□□ -0.56
NPHP4-202ENST00000378161 TNKS2Q9H2K2 1166 aa11.54□□□□□ -0.56
NPHP4-202ENST00000378161 MAP10Q9P2G4 905 aa11.54□□□□□ -0.56
NPHP4-202ENST00000378161 SAE1Q9UBE0 346 aaPredicted RBP11.54□□□□□ -0.56
NPHP4-202ENST00000378161 MIOXQ9UGB7 285 aa11.54□□□□□ -0.56
NPHP4-202ENST00000378161 EIF2B4Q9UI10 523 aaKnown RBP11.54□□□□□ -0.56
NPHP4-202ENST00000378161 ZNF225Q9UK10 706 aa11.54□□□□□ -0.56
NPHP4-202ENST00000378161 NOCTQ9UK39 431 aaKnown RBP11.54□□□□□ -0.56
NPHP4-202ENST00000378161 BBIP1A8MTZ0 92 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms