RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 CYP2A7P20853 494 aa16.26■□□□□ 0.19
HMGN4-201ENST00000377575 ATP5DP30049 168 aa16.26■□□□□ 0.19
HMGN4-201ENST00000377575 DNASE1L3Q13609 305 aa16.26■□□□□ 0.19
HMGN4-201ENST00000377575 LONRF1Q17RB8 773 aa16.26■□□□□ 0.19
HMGN4-201ENST00000377575 SLC5A12Q1EHB4 618 aa16.26■□□□□ 0.19
HMGN4-201ENST00000377575 PAPD7Q5XG87 772 aaKnown RBP16.26■□□□□ 0.19
HMGN4-201ENST00000377575 LMNTD2Q8IXW0 634 aa16.26■□□□□ 0.19
HMGN4-201ENST00000377575 CALML6Q8TD86 181 aa16.26■□□□□ 0.19
HMGN4-201ENST00000377575 CT55Q8WUE5 264 aa16.26■□□□□ 0.19
HMGN4-201ENST00000377575 TCTN2Q96GX1 697 aa16.26■□□□□ 0.19
HMGN4-201ENST00000377575 CAPZA3Q96KX2 299 aa16.26■□□□□ 0.19
HMGN4-201ENST00000377575 TRIM56Q9BRZ2 755 aaKnown RBP16.26■□□□□ 0.19
HMGN4-201ENST00000377575 SEMA4CQ9C0C4 833 aa16.26■□□□□ 0.19
HMGN4-201ENST00000377575 KLHL25Q9H0H3 589 aa16.26■□□□□ 0.19
HMGN4-201ENST00000377575 SPHK1Q9NYA1 384 aa16.26■□□□□ 0.19
HMGN4-201ENST00000377575 IL1RAPL1Q9NZN1 696 aa16.26■□□□□ 0.19
HMGN4-201ENST00000377575 SERTAD3Q9UJW9 196 aa16.26■□□□□ 0.19
HMGN4-201ENST00000377575 CRYL1Q9Y2S2 319 aa16.26■□□□□ 0.19
HMGN4-201ENST00000377575 MRPS18BQ9Y676 258 aaKnown RBP16.26■□□□□ 0.19
HMGN4-201ENST00000377575 SAR1BQ9Y6B6 198 aa16.26■□□□□ 0.19
HMGN4-201ENST00000377575 CFAP46Q8IYW2 2715 aa16.25■□□□□ 0.19
HMGN4-201ENST00000377575 SPTBP11277 2137 aa16.25■□□□□ 0.19
HMGN4-201ENST00000377575 ZCWPW2A0A1B0GU75 182 aa16.25■□□□□ 0.19
HMGN4-201ENST00000377575 DNALI1O14645 258 aaPredicted RBP16.25■□□□□ 0.19
HMGN4-201ENST00000377575 TERTO14746 1132 aaKnown RBP16.25■□□□□ 0.19
HMGN4-201ENST00000377575 NKX2-8O15522 239 aa16.25■□□□□ 0.19
HMGN4-201ENST00000377575 NIPSNAP2O75323 286 aa16.25■□□□□ 0.19
HMGN4-201ENST00000377575 KATNA1O75449 491 aa16.25■□□□□ 0.19
HMGN4-201ENST00000377575 KLK3P07288 261 aaPredicted RBP16.25■□□□□ 0.19
HMGN4-201ENST00000377575 FAM87AP0C7U9 286 aa16.25■□□□□ 0.19
HMGN4-201ENST00000377575 TPBGLP0DKB5 382 aa16.25■□□□□ 0.19
HMGN4-201ENST00000377575 CHRM3P20309 590 aa16.25■□□□□ 0.19
HMGN4-201ENST00000377575 F8A1P23610 371 aa16.25■□□□□ 0.19
HMGN4-201ENST00000377575 CCNFP41002 786 aa16.25■□□□□ 0.19
HMGN4-201ENST00000377575 CCR10P46092 362 aa16.25■□□□□ 0.19
HMGN4-201ENST00000377575 ITGA1P56199 1179 aa16.25■□□□□ 0.19
HMGN4-201ENST00000377575 C16orf46Q6P387 395 aa16.25■□□□□ 0.19
HMGN4-201ENST00000377575 CDHR3Q6ZTQ4 885 aa16.25■□□□□ 0.19
HMGN4-201ENST00000377575 SYDE1Q6ZW31 735 aaPredicted RBP16.25■□□□□ 0.19
HMGN4-201ENST00000377575 CENPUQ71F23 418 aa16.25■□□□□ 0.19
HMGN4-201ENST00000377575 TRIM73Q86UV7 250 aa16.25■□□□□ 0.19
HMGN4-201ENST00000377575 GPR135Q8IZ08 494 aa16.25■□□□□ 0.19
HMGN4-201ENST00000377575 EXD3Q8N9H8 876 aa16.25■□□□□ 0.19
HMGN4-201ENST00000377575 MAGEC3Q8TD91 643 aa16.25■□□□□ 0.19
HMGN4-201ENST00000377575 SEC14L1Q92503 715 aa16.25■□□□□ 0.19
HMGN4-201ENST00000377575 RAD51AP1Q96B01 352 aa16.25■□□□□ 0.19
HMGN4-201ENST00000377575 SLC22A18Q96BI1 424 aa16.25■□□□□ 0.19
HMGN4-201ENST00000377575 LRFN5Q96NI6 719 aa16.25■□□□□ 0.19
HMGN4-201ENST00000377575 GPR87Q9BY21 358 aa16.25■□□□□ 0.19
HMGN4-201ENST00000377575 SLC7A5P2Q9GIP4 190 aa16.25■□□□□ 0.19
HMGN4-201ENST00000377575 TWSG1Q9GZX9 223 aa16.25■□□□□ 0.19
HMGN4-201ENST00000377575 CHRNA10Q9GZZ6 450 aa16.25■□□□□ 0.19
HMGN4-201ENST00000377575 CCDC68Q9H2F9 335 aa16.25■□□□□ 0.19
HMGN4-201ENST00000377575 ADNPQ9H2P0 1102 aa16.25■□□□□ 0.19
HMGN4-201ENST00000377575 SLC39A10Q9ULF5 831 aa16.25■□□□□ 0.19
HMGN4-201ENST00000377575 PYCARDQ9ULZ3 195 aa16.25■□□□□ 0.19
HMGN4-201ENST00000377575 BOD1L1Q8NFC6 3051 aa16.24■□□□□ 0.19
HMGN4-201ENST00000377575 E7EQ34 232 aa16.24■□□□□ 0.19
HMGN4-201ENST00000377575 RASGRF2O14827 1237 aa16.24■□□□□ 0.19
HMGN4-201ENST00000377575 S1PR4O95977 384 aa16.24■□□□□ 0.19
HMGN4-201ENST00000377575 PKMP14618 531 aaKnown RBP16.24■□□□□ 0.19
HMGN4-201ENST00000377575 PGAM1P18669 254 aa16.24■□□□□ 0.19
HMGN4-201ENST00000377575 CD9P21926 228 aa16.24■□□□□ 0.19
HMGN4-201ENST00000377575 OAS2P29728 719 aaKnown RBP16.24■□□□□ 0.19
HMGN4-201ENST00000377575 PEBP1P30086 187 aaKnown RBP16.24■□□□□ 0.19
HMGN4-201ENST00000377575 ZBTB2Q8N680 514 aa16.24■□□□□ 0.19
HMGN4-201ENST00000377575 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.24■□□□□ 0.19
HMGN4-201ENST00000377575 OR2L8Q8NGY9 312 aa16.24■□□□□ 0.19
HMGN4-201ENST00000377575 OR1L3Q8NH93 324 aa16.24■□□□□ 0.19
HMGN4-201ENST00000377575 FLVCR1-AS1Q8TAF5 88 aa16.24■□□□□ 0.19
HMGN4-201ENST00000377575 GABPB2Q8TAK5 448 aaPredicted RBP16.24■□□□□ 0.19
HMGN4-201ENST00000377575 MR1Q95460 341 aa16.24■□□□□ 0.19
HMGN4-201ENST00000377575 CLIP3Q96DZ5 547 aa16.24■□□□□ 0.19
HMGN4-201ENST00000377575 SIGLEC10Q96LC7 697 aa16.24■□□□□ 0.19
HMGN4-201ENST00000377575 FAM167BQ9BTA0 163 aa16.24■□□□□ 0.19
HMGN4-201ENST00000377575 MENTQ9BUN1 341 aa16.24■□□□□ 0.19
HMGN4-201ENST00000377575 FAM117AQ9C073 453 aa16.24■□□□□ 0.19
HMGN4-201ENST00000377575 ACTR5Q9H9F9 607 aaPredicted RBP16.24■□□□□ 0.19
HMGN4-201ENST00000377575 C20orf96Q9NUD7 363 aaPredicted RBP16.24■□□□□ 0.19
HMGN4-201ENST00000377575 FASNP49327 2511 aaKnown RBP16.24■□□□□ 0.19
HMGN4-201ENST00000377575 CCDC188H7C350 402 aa16.23■□□□□ 0.19
HMGN4-201ENST00000377575 CREG1O75629 220 aa16.23■□□□□ 0.19
HMGN4-201ENST00000377575 C1orf105O95561 183 aa16.23■□□□□ 0.19
HMGN4-201ENST00000377575 TTC4O95801 387 aa16.23■□□□□ 0.19
HMGN4-201ENST00000377575 HBQ1P09105 142 aa16.23■□□□□ 0.19
HMGN4-201ENST00000377575 SLC1A2P43004 574 aa16.23■□□□□ 0.19
HMGN4-201ENST00000377575 PAFAH1B1P43034 410 aa16.23■□□□□ 0.19
HMGN4-201ENST00000377575 BDKRB1P46663 353 aa16.23■□□□□ 0.19
HMGN4-201ENST00000377575 POLE2P56282 527 aa16.23■□□□□ 0.19
HMGN4-201ENST00000377575 RPS15P62841 145 aaKnown RBP16.23■□□□□ 0.19
HMGN4-201ENST00000377575 DR1Q01658 176 aa16.23■□□□□ 0.19
HMGN4-201ENST00000377575 GPS2Q13227 327 aa16.23■□□□□ 0.19
HMGN4-201ENST00000377575 GBX1Q14549 363 aa16.23■□□□□ 0.19
HMGN4-201ENST00000377575 TTLL9Q3SXZ7 439 aa16.23■□□□□ 0.19
HMGN4-201ENST00000377575 ZNF789Q5FWF6 425 aa16.23■□□□□ 0.19
HMGN4-201ENST00000377575 IZUMO3Q5VZ72 239 aa16.23■□□□□ 0.19
HMGN4-201ENST00000377575 CNSTQ6PJW8 725 aa16.23■□□□□ 0.19
HMGN4-201ENST00000377575 CREG2Q8IUH2 290 aa16.23■□□□□ 0.19
HMGN4-201ENST00000377575 DENND6AQ8IWF6 608 aa16.23■□□□□ 0.19
HMGN4-201ENST00000377575 KLHL7Q8IXQ5 586 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms