RNA–Protein interactions for RNA: ENST00000377526.3

AUP1-201, Transcript of AUP1, lipid droplet regulating VLDL assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AUP1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AUP1-201ENST00000377526 SLC17A7Q9P2U7 560 aa18.96■□□□□ 0.63
AUP1-201ENST00000377526 LRIT1Q9P2V4 623 aa18.96■□□□□ 0.63
AUP1-201ENST00000377526 GRID1Q9ULK0 1009 aa18.96■□□□□ 0.63
AUP1-201ENST00000377526 ICKQ9UPZ9 632 aa18.96■□□□□ 0.63
AUP1-201ENST00000377526 NUDT21O43809 227 aaKnown RBP18.95■□□□□ 0.62
AUP1-201ENST00000377526 PLIN3O60664 434 aa18.95■□□□□ 0.62
AUP1-201ENST00000377526 PROCP04070 461 aa18.95■□□□□ 0.62
AUP1-201ENST00000377526 RBP1P09455 135 aa18.95■□□□□ 0.62
AUP1-201ENST00000377526 MTHFD2P13995 350 aa18.95■□□□□ 0.62
AUP1-201ENST00000377526 GLB1P16278 677 aa18.95■□□□□ 0.62
AUP1-201ENST00000377526 MPP2Q14168 576 aa18.95■□□□□ 0.62
AUP1-201ENST00000377526 TTC23LQ6PF05 361 aa18.95■□□□□ 0.62
AUP1-201ENST00000377526 ZNF438Q7Z4V0 828 aa18.95■□□□□ 0.62
AUP1-201ENST00000377526 RBM12BQ8IXT5 1001 aaKnown RBP18.95■□□□□ 0.62
AUP1-201ENST00000377526 KIAA2013Q8IYS2 634 aa18.95■□□□□ 0.62
AUP1-201ENST00000377526 AVL9Q8NBF6 648 aa18.95■□□□□ 0.62
AUP1-201ENST00000377526 BAHD1Q8TBE0 780 aaPredicted RBP18.95■□□□□ 0.62
AUP1-201ENST00000377526 MAGEC3Q8TD91 643 aa18.95■□□□□ 0.62
AUP1-201ENST00000377526 ZFPM2Q8WW38 1151 aa18.95■□□□□ 0.62
AUP1-201ENST00000377526 CNDP2Q96KP4 475 aaKnown RBP18.95■□□□□ 0.62
AUP1-201ENST00000377526 TBC1D10AQ9BXI6 508 aa18.95■□□□□ 0.62
AUP1-201ENST00000377526 PLLPQ9Y342 182 aa18.95■□□□□ 0.62
AUP1-201ENST00000377526 CCDC189A1A4V9 331 aa18.95■□□□□ 0.62
AUP1-201ENST00000377526 EME2A4GXA9 379 aaPredicted RBP18.95■□□□□ 0.62
AUP1-201ENST00000377526 NCF1BA6NI72 391 aaPredicted RBP18.95■□□□□ 0.62
AUP1-201ENST00000377526 NCF1CA8MVU1 366 aaPredicted RBP18.95■□□□□ 0.62
AUP1-201ENST00000377526 CBFA2T3O75081 653 aa18.95■□□□□ 0.62
AUP1-201ENST00000377526 SLC16A8O95907 504 aa18.95■□□□□ 0.62
AUP1-201ENST00000377526 CKMT1AP12532 417 aa18.95■□□□□ 0.62
AUP1-201ENST00000377526 NCF1P14598 390 aaPredicted RBP18.95■□□□□ 0.62
AUP1-201ENST00000377526 RPA3P35244 121 aaPredicted RBP18.95■□□□□ 0.62
AUP1-201ENST00000377526 BIRC2Q13490 618 aa18.95■□□□□ 0.62
AUP1-201ENST00000377526 ZXDCQ2QGD7 858 aaPredicted RBP18.95■□□□□ 0.62
AUP1-201ENST00000377526 PKNOX2Q96KN3 472 aa18.95■□□□□ 0.62
AUP1-201ENST00000377526 TRIM54Q9BYV2 358 aa18.95■□□□□ 0.62
AUP1-201ENST00000377526 UCK1Q9HA47 277 aa18.95■□□□□ 0.62
AUP1-201ENST00000377526 ARL15Q9NXU5 204 aa18.95■□□□□ 0.62
AUP1-201ENST00000377526 ASXL3Q9C0F0 2248 aa18.94■□□□□ 0.62
AUP1-201ENST00000377526 RHPN2P1A8MT19 583 aa18.94■□□□□ 0.62
AUP1-201ENST00000377526 HMGB1P1B2RPK0 211 aaPredicted RBP18.94■□□□□ 0.62
AUP1-201ENST00000377526 SUPT3HB4E1H0 165 aa18.94■□□□□ 0.62
AUP1-201ENST00000377526 PRPF4O43172 522 aaKnown RBP eCLIP18.94■□□□□ 0.621e-8■□□□□ 9.5
AUP1-201ENST00000377526 SUPT3HO75486 399 aa18.94■□□□□ 0.62
AUP1-201ENST00000377526 LDOC1O95751 146 aaPredicted RBP18.94■□□□□ 0.62
AUP1-201ENST00000377526 HIST1H2AGP0C0S8 130 aaPredicted RBP18.94■□□□□ 0.62
AUP1-201ENST00000377526 HIST1H2ADP20671 130 aa18.94■□□□□ 0.62
AUP1-201ENST00000377526 IMPA1P29218 277 aa18.94■□□□□ 0.62
AUP1-201ENST00000377526 PKLRP30613 574 aa18.94■□□□□ 0.62
AUP1-201ENST00000377526 LIMK1P53667 647 aa18.94■□□□□ 0.62
AUP1-201ENST00000377526 AP1S2P56377 157 aa18.94■□□□□ 0.62
AUP1-201ENST00000377526 CDKL1Q00532 357 aa18.94■□□□□ 0.62
AUP1-201ENST00000377526 PLCL1Q15111 1095 aa18.94■□□□□ 0.62
AUP1-201ENST00000377526 PERM1Q5SV97 790 aa18.94■□□□□ 0.62
AUP1-201ENST00000377526 LINC01555Q8NAE3 123 aa18.94■□□□□ 0.62
AUP1-201ENST00000377526 PDPRQ8NCN5 879 aa18.94■□□□□ 0.62
AUP1-201ENST00000377526 ZNF480Q8WV37 535 aa18.94■□□□□ 0.62
AUP1-201ENST00000377526 CCDC74AQ96AQ1 378 aa18.94■□□□□ 0.62
AUP1-201ENST00000377526 HIST1H2AHQ96KK5 128 aa18.94■□□□□ 0.62
AUP1-201ENST00000377526 CCDC138Q96M89 665 aa18.94■□□□□ 0.62
AUP1-201ENST00000377526 FAM111AQ96PZ2 611 aa18.94■□□□□ 0.62
AUP1-201ENST00000377526 SLC38A3Q99624 504 aa18.94■□□□□ 0.62
AUP1-201ENST00000377526 HIST1H2AJQ99878 128 aa18.94■□□□□ 0.62
AUP1-201ENST00000377526 H2AFJQ9BTM1 129 aa18.94■□□□□ 0.62
AUP1-201ENST00000377526 IQCGQ9H095 443 aaKnown RBP18.94■□□□□ 0.62
AUP1-201ENST00000377526 NUDT4Q9NZJ9 180 aa18.94■□□□□ 0.62
AUP1-201ENST00000377526 NCKIPSDQ9NZQ3 722 aa18.94■□□□□ 0.62
AUP1-201ENST00000377526 STOX2Q9P2F5 926 aaPredicted RBP18.94■□□□□ 0.62
AUP1-201ENST00000377526 FTSJ1Q9UET6 329 aa18.94■□□□□ 0.62
AUP1-201ENST00000377526 RP1P56715 2156 aa18.93■□□□□ 0.62
AUP1-201ENST00000377526 CPED1A4D0V7 1026 aa18.93■□□□□ 0.62
AUP1-201ENST00000377526 LILRA5A6NI73 299 aa18.93■□□□□ 0.62
AUP1-201ENST00000377526 SYCE1LA8MT33 242 aa18.93■□□□□ 0.62
AUP1-201ENST00000377526 CASC3O15234 703 aaKnown RBP18.93■□□□□ 0.62
AUP1-201ENST00000377526 ERGP11308 486 aa18.93■□□□□ 0.62
AUP1-201ENST00000377526 DAB2P98082 770 aa18.93■□□□□ 0.62
AUP1-201ENST00000377526 NR1D2Q14995 579 aa18.93■□□□□ 0.62
AUP1-201ENST00000377526 C18orf21Q32NC0 220 aaPredicted RBP18.93■□□□□ 0.62
AUP1-201ENST00000377526 CCDC153Q494R4 210 aa18.93■□□□□ 0.62
AUP1-201ENST00000377526 EFL1Q7Z2Z2 1120 aaKnown RBP18.93■□□□□ 0.62
AUP1-201ENST00000377526 PIP4P1Q86T03 277 aa18.93■□□□□ 0.62
AUP1-201ENST00000377526 OR4E2Q8NGC2 313 aa18.93■□□□□ 0.62
AUP1-201ENST00000377526 LCN9Q8WX39 176 aa18.93■□□□□ 0.62
AUP1-201ENST00000377526 SH3KBP1Q96B97 665 aa18.93■□□□□ 0.62
AUP1-201ENST00000377526 EGFL8Q99944 293 aa18.93■□□□□ 0.62
AUP1-201ENST00000377526 KCNK9Q9NPC2 374 aa18.93■□□□□ 0.62
AUP1-201ENST00000377526 CD274Q9NZQ7 290 aa18.93■□□□□ 0.62
AUP1-201ENST00000377526 SPATA7Q9P0W8 599 aa18.93■□□□□ 0.62
AUP1-201ENST00000377526 H3BQF6 201 aa18.92■□□□□ 0.62
AUP1-201ENST00000377526 RAB28P51157 221 aa18.92■□□□□ 0.62
AUP1-201ENST00000377526 FASTKQ14296 549 aaKnown RBP18.92■□□□□ 0.62
AUP1-201ENST00000377526 FBXO48Q5FWF7 155 aa18.92■□□□□ 0.62
AUP1-201ENST00000377526 C2orf73Q8N5S3 287 aaPredicted RBP18.92■□□□□ 0.62
AUP1-201ENST00000377526 PPFIBP2Q8ND30 876 aa18.92■□□□□ 0.62
AUP1-201ENST00000377526 ARMC2Q8NEN0 867 aa18.92■□□□□ 0.62
AUP1-201ENST00000377526 OR6C4Q8NGE1 309 aa18.92■□□□□ 0.62
AUP1-201ENST00000377526 RHBDF1Q96CC6 855 aa18.92■□□□□ 0.62
AUP1-201ENST00000377526 FBXL8Q96CD0 374 aa18.92■□□□□ 0.62
AUP1-201ENST00000377526 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.92■□□□□ 0.62
AUP1-201ENST00000377526 OGFRQ9NZT2 677 aa18.92■□□□□ 0.62
AUP1-201ENST00000377526 TMEM120BA0PK00 339 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms