RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 ZBTB2Q8N680 514 aa20.3■□□□□ 0.84
VSX1-201ENST00000376707 TMEM102Q8N9M5 508 aaPredicted RBP20.3■□□□□ 0.84
VSX1-201ENST00000376707 PPHLN1Q8NEY8 458 aaKnown RBP20.3■□□□□ 0.84
VSX1-201ENST00000376707 FLVCR1-AS1Q8TAF5 88 aa20.3■□□□□ 0.84
VSX1-201ENST00000376707 ASZ1Q8WWH4 475 aa20.3■□□□□ 0.84
VSX1-201ENST00000376707 SGSM3Q96HU1 749 aa20.3■□□□□ 0.84
VSX1-201ENST00000376707 SPRTNQ9H040 489 aaPredicted RBP20.3■□□□□ 0.84
VSX1-201ENST00000376707 GPN3Q9UHW5 284 aaPredicted RBP20.3■□□□□ 0.84
VSX1-201ENST00000376707 PCDHGB7Q9Y5F8 929 aa20.3■□□□□ 0.84
VSX1-201ENST00000376707 ZNF185O15231 689 aa20.29■□□□□ 0.84
VSX1-201ENST00000376707 HCRTR1O43613 425 aa20.29■□□□□ 0.84
VSX1-201ENST00000376707 VPS4BO75351 444 aa20.29■□□□□ 0.84
VSX1-201ENST00000376707 CEACAM4O75871 244 aa20.29■□□□□ 0.84
VSX1-201ENST00000376707 RPN2P04844 631 aa20.29■□□□□ 0.84
VSX1-201ENST00000376707 ATXN8OSP0DMR3 200 aa20.29■□□□□ 0.84
VSX1-201ENST00000376707 CBSLP0DN79 551 aa20.29■□□□□ 0.84
VSX1-201ENST00000376707 CBSP35520 551 aa20.29■□□□□ 0.84
VSX1-201ENST00000376707 GABRA4P48169 554 aa20.29■□□□□ 0.84
VSX1-201ENST00000376707 CCZ1BP86790 482 aa20.29■□□□□ 0.84
VSX1-201ENST00000376707 CCZ1P86791 482 aaPredicted RBP20.29■□□□□ 0.84
VSX1-201ENST00000376707 ATP1A4Q13733 1029 aa20.29■□□□□ 0.84
VSX1-201ENST00000376707 SEMA3AQ14563 771 aa20.29■□□□□ 0.84
VSX1-201ENST00000376707 NADK2Q4G0N4 442 aa20.29■□□□□ 0.84
VSX1-201ENST00000376707 C1orf189Q5VU69 101 aa20.29■□□□□ 0.84
VSX1-201ENST00000376707 RHBDD2Q6NTF9 364 aa20.29■□□□□ 0.84
VSX1-201ENST00000376707 FAM26EQ8N5C1 309 aa20.29■□□□□ 0.84
VSX1-201ENST00000376707 TRIM58Q8NG06 486 aa20.29■□□□□ 0.84
VSX1-201ENST00000376707 AP1M1Q9BXS5 423 aa20.29■□□□□ 0.84
VSX1-201ENST00000376707 TXLNGQ9NUQ3 528 aa20.29■□□□□ 0.84
VSX1-201ENST00000376707 VPS4AQ9UN37 437 aa20.29■□□□□ 0.84
VSX1-201ENST00000376707 NBASA2RRP1 2371 aa20.28■□□□□ 0.84
VSX1-201ENST00000376707 CLEC18AA5D8T8 446 aa20.28■□□□□ 0.84
VSX1-201ENST00000376707 A6NL46 340 aa20.28■□□□□ 0.84
VSX1-201ENST00000376707 ZSCAN9O15535 394 aaPredicted RBP20.28■□□□□ 0.84
VSX1-201ENST00000376707 APOA4P06727 396 aa20.28■□□□□ 0.84
VSX1-201ENST00000376707 PKLRP30613 574 aa20.28■□□□□ 0.84
VSX1-201ENST00000376707 OTX2P32243 289 aa20.28■□□□□ 0.84
VSX1-201ENST00000376707 RPL22P35268 128 aaKnown RBP20.28■□□□□ 0.84
VSX1-201ENST00000376707 RAB28P51157 221 aa20.28■□□□□ 0.84
VSX1-201ENST00000376707 DCDP81605 110 aaKnown RBP20.28■□□□□ 0.84
VSX1-201ENST00000376707 SRSF1Q07955 248 aaKnown RBP eCLIP20.28■□□□□ 0.84
VSX1-201ENST00000376707 CLEC18BQ6UXF7 455 aa20.28■□□□□ 0.84
VSX1-201ENST00000376707 C4orf22Q6V702 233 aa20.28■□□□□ 0.84
VSX1-201ENST00000376707 ZNF655Q8N720 491 aaPredicted RBP20.28■□□□□ 0.84
VSX1-201ENST00000376707 CLEC18CQ8NCF0 446 aa20.28■□□□□ 0.84
VSX1-201ENST00000376707 FDCSPQ8NFU4 85 aa20.28■□□□□ 0.84
VSX1-201ENST00000376707 CFAP61Q8NHU2 1237 aa20.28■□□□□ 0.84
VSX1-201ENST00000376707 CPT1CQ8TCG5 803 aa20.28■□□□□ 0.84
VSX1-201ENST00000376707 PROKR1Q8TCW9 393 aa20.28■□□□□ 0.84
VSX1-201ENST00000376707 MAIP1Q8WWC4 291 aa20.28■□□□□ 0.84
VSX1-201ENST00000376707 CARD6Q9BX69 1037 aa20.28■□□□□ 0.84
VSX1-201ENST00000376707 EIF2B3Q9NR50 452 aaKnown RBP20.28■□□□□ 0.84
VSX1-201ENST00000376707 CATSPERZQ9NTU4 200 aa20.28■□□□□ 0.84
VSX1-201ENST00000376707 GPR83Q9NYM4 423 aa20.28■□□□□ 0.84
VSX1-201ENST00000376707 IFT80Q9P2H3 777 aaPredicted RBP20.28■□□□□ 0.84
VSX1-201ENST00000376707 SRPK3Q9UPE1 567 aa20.28■□□□□ 0.84
VSX1-201ENST00000376707 PLCL2Q9UPR0 1127 aa20.28■□□□□ 0.84
VSX1-201ENST00000376707 PTPN13Q12923 2485 aa20.28■□□□□ 0.84
VSX1-201ENST00000376707 FLNCQ14315 2725 aa20.27■□□□□ 0.84
VSX1-201ENST00000376707 IQCF5A8MTL0 148 aa20.27■□□□□ 0.84
VSX1-201ENST00000376707 H3BMH7 237 aa20.27■□□□□ 0.84
VSX1-201ENST00000376707 DPM1O60762 260 aa20.27■□□□□ 0.84
VSX1-201ENST00000376707 FGGP02679 453 aa20.27■□□□□ 0.84
VSX1-201ENST00000376707 CD63P08962 238 aa20.27■□□□□ 0.84
VSX1-201ENST00000376707 ZSCAN5DPP0CG00 497 aa20.27■□□□□ 0.84
VSX1-201ENST00000376707 PEBP1P30086 187 aaKnown RBP20.27■□□□□ 0.84
VSX1-201ENST00000376707 FOLR3P41439 243 aa20.27■□□□□ 0.84
VSX1-201ENST00000376707 TMED2Q15363 201 aa20.27■□□□□ 0.84
VSX1-201ENST00000376707 PCID2Q5JVF3 399 aa20.27■□□□□ 0.84
VSX1-201ENST00000376707 TLDC1Q6P9B6 456 aa20.27■□□□□ 0.84
VSX1-201ENST00000376707 LDB1Q86U70 411 aaPredicted RBP20.27■□□□□ 0.84
VSX1-201ENST00000376707 VRK3Q8IV63 474 aa20.27■□□□□ 0.84
VSX1-201ENST00000376707 DNAJC22Q8N4W6 341 aa20.27■□□□□ 0.84
VSX1-201ENST00000376707 LKAAEAR1Q8TD35 194 aa20.27■□□□□ 0.84
VSX1-201ENST00000376707 IP6K3Q96PC2 410 aa20.27■□□□□ 0.84
VSX1-201ENST00000376707 GBP5Q96PP8 586 aa20.27■□□□□ 0.84
VSX1-201ENST00000376707 NDC1Q9BTX1 674 aa20.27■□□□□ 0.84
VSX1-201ENST00000376707 NUDT9Q9BW91 350 aa20.27■□□□□ 0.84
VSX1-201ENST00000376707 CHRAC1Q9NRG0 131 aa20.27■□□□□ 0.84
VSX1-201ENST00000376707 DHCR7Q9UBM7 475 aaKnown RBP20.27■□□□□ 0.84
VSX1-201ENST00000376707 NDOR1Q9UHB4 597 aa20.27■□□□□ 0.84
VSX1-201ENST00000376707 CDYLQ9Y232 598 aa20.27■□□□□ 0.84
VSX1-201ENST00000376707 PTRH2Q9Y3E5 179 aaKnown RBP20.27■□□□□ 0.84
VSX1-201ENST00000376707 RELNP78509 3460 aa20.26■□□□□ 0.83
VSX1-201ENST00000376707 SPTBP11277 2137 aa20.26■□□□□ 0.83
VSX1-201ENST00000376707 PRMT5O14744 637 aaPredicted RBP20.26■□□□□ 0.83
VSX1-201ENST00000376707 GPC4O75487 556 aa20.26■□□□□ 0.83
VSX1-201ENST00000376707 KLF7O75840 302 aaPredicted RBP20.26■□□□□ 0.83
VSX1-201ENST00000376707 CTSBP07858 339 aa20.26■□□□□ 0.83
VSX1-201ENST00000376707 TTPAP49638 278 aa20.26■□□□□ 0.83
VSX1-201ENST00000376707 SESN2P58004 480 aaPredicted RBP20.26■□□□□ 0.83
VSX1-201ENST00000376707 SSPNQ14714 243 aa20.26■□□□□ 0.83
VSX1-201ENST00000376707 KYNUQ16719 465 aa20.26■□□□□ 0.83
VSX1-201ENST00000376707 PTRHD1Q6GMV3 140 aaKnown RBP20.26■□□□□ 0.83
VSX1-201ENST00000376707 UNC5DQ6UXZ4 953 aa20.26■□□□□ 0.83
VSX1-201ENST00000376707 MRGPREQ86SM8 312 aa20.26■□□□□ 0.83
VSX1-201ENST00000376707 HPS6Q86YV9 775 aa20.26■□□□□ 0.83
VSX1-201ENST00000376707 DCUN1D3Q8IWE4 304 aa20.26■□□□□ 0.83
VSX1-201ENST00000376707 FAM20CQ8IXL6 584 aa20.26■□□□□ 0.83
VSX1-201ENST00000376707 KRT222Q8N1A0 295 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms