RNA–Protein interactions for RNA: ENST00000376570.8

DDR1-227, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-227ENST00000376570 H3BM21 787 aa11.41□□□□□ -0.58
DDR1-227ENST00000376570 CLDN9O95484 217 aa11.41□□□□□ -0.58
DDR1-227ENST00000376570 PEX11BO96011 259 aa11.41□□□□□ -0.58
DDR1-227ENST00000376570 TRBC1P01850 177 aa11.41□□□□□ -0.58
DDR1-227ENST00000376570 MTHFD2P13995 350 aa11.41□□□□□ -0.58
DDR1-227ENST00000376570 NUDT6P53370 316 aa11.41□□□□□ -0.58
DDR1-227ENST00000376570 GANABQ14697 944 aaKnown RBP11.41□□□□□ -0.58
DDR1-227ENST00000376570 TRIM71Q2Q1W2 868 aaKnown RBP11.41□□□□□ -0.58
DDR1-227ENST00000376570 C11orf91Q3C1V1 193 aa11.41□□□□□ -0.58
DDR1-227ENST00000376570 CXorf57Q6NSI4 855 aaKnown RBP11.41□□□□□ -0.58
DDR1-227ENST00000376570 TNFAIP8L2Q6P589 184 aaPredicted RBP11.41□□□□□ -0.58
DDR1-227ENST00000376570 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.41□□□□□ -0.58
DDR1-227ENST00000376570 KBTBD6Q86V97 674 aa11.41□□□□□ -0.58
DDR1-227ENST00000376570 ARL10Q8N8L6 244 aa11.41□□□□□ -0.58
DDR1-227ENST00000376570 ASB9Q96DX5 294 aa11.41□□□□□ -0.58
DDR1-227ENST00000376570 SORBS1Q9BX66 1292 aaKnown RBP11.41□□□□□ -0.58
DDR1-227ENST00000376570 FZD3Q9NPG1 666 aa11.41□□□□□ -0.58
DDR1-227ENST00000376570 TRNAU1APQ9NX07 287 aaKnown RBP11.41□□□□□ -0.58
DDR1-227ENST00000376570 DUS2Q9NX74 493 aaKnown RBP11.41□□□□□ -0.58
DDR1-227ENST00000376570 DMTF1Q9Y222 760 aa11.41□□□□□ -0.58
DDR1-227ENST00000376570 GPSM3Q9Y4H4 160 aa11.41□□□□□ -0.58
DDR1-227ENST00000376570 LOC285095A0A1B0GVY8 99 aa11.41□□□□□ -0.58
DDR1-227ENST00000376570 C7orf72A4D263 438 aa11.41□□□□□ -0.58
DDR1-227ENST00000376570 TMEM202A6NGA9 273 aa11.41□□□□□ -0.58
DDR1-227ENST00000376570 M0R129 80 aa11.41□□□□□ -0.58
DDR1-227ENST00000376570 GSTM1P09488 218 aa11.41□□□□□ -0.58
DDR1-227ENST00000376570 HPCAP84074 193 aa11.41□□□□□ -0.58
DDR1-227ENST00000376570 MANEALQ5VSG8 457 aa11.41□□□□□ -0.58
DDR1-227ENST00000376570 CRTC1Q6UUV9 634 aa11.41□□□□□ -0.58
DDR1-227ENST00000376570 LIMS2Q7Z4I7 341 aa11.41□□□□□ -0.58
DDR1-227ENST00000376570 SNX20Q7Z614 316 aa11.41□□□□□ -0.58
DDR1-227ENST00000376570 CMTR2Q8IYT2 770 aaKnown RBP11.41□□□□□ -0.58
DDR1-227ENST00000376570 TMEM199Q8N511 208 aa11.41□□□□□ -0.58
DDR1-227ENST00000376570 C1orf52Q8N6N3 182 aaKnown RBP11.41□□□□□ -0.58
DDR1-227ENST00000376570 ATOH8Q96SQ7 321 aa11.41□□□□□ -0.58
DDR1-227ENST00000376570 IL17CQ9P0M4 197 aa11.41□□□□□ -0.58
DDR1-227ENST00000376570 PCTPQ9UKL6 214 aa11.41□□□□□ -0.58
DDR1-227ENST00000376570 SAMHD1Q9Y3Z3 626 aaKnown RBP11.41□□□□□ -0.58
DDR1-227ENST00000376570 TNPO3Q9Y5L0 923 aaKnown RBP11.41□□□□□ -0.58
DDR1-227ENST00000376570 PTPRFP10586 1907 aa11.41□□□□□ -0.58
DDR1-227ENST00000376570 CDH23Q9H251 3354 aa11.4□□□□□ -0.58
DDR1-227ENST00000376570 ANK1P16157 1881 aa11.4□□□□□ -0.58
DDR1-227ENST00000376570 A0A1W2PPW3 197 aa11.4□□□□□ -0.58
DDR1-227ENST00000376570 CYP7B1O75881 506 aa11.4□□□□□ -0.58
DDR1-227ENST00000376570 ANXA6P08133 673 aa11.4□□□□□ -0.58
DDR1-227ENST00000376570 ANXA4P09525 319 aaPredicted RBP11.4□□□□□ -0.58
DDR1-227ENST00000376570 PABPC4LP0CB38 370 aaKnown RBP11.4□□□□□ -0.58
DDR1-227ENST00000376570 PDHA2P29803 388 aa11.4□□□□□ -0.58
DDR1-227ENST00000376570 CCDC85BQ15834 202 aaPredicted RBP11.4□□□□□ -0.58
DDR1-227ENST00000376570 ERAP2Q6P179 960 aa11.4□□□□□ -0.58
DDR1-227ENST00000376570 CYS1Q717R9 158 aa11.4□□□□□ -0.58
DDR1-227ENST00000376570 EXOSC8Q96B26 276 aaKnown RBP11.4□□□□□ -0.58
DDR1-227ENST00000376570 REXO5Q96IC2 774 aaKnown RBP11.4□□□□□ -0.58
DDR1-227ENST00000376570 MGME1Q9BQP7 344 aa11.4□□□□□ -0.58
DDR1-227ENST00000376570 PTTG2Q9NZH5 202 aa11.4□□□□□ -0.58
DDR1-227ENST00000376570 MBD1Q9UIS9 605 aaPredicted RBP11.4□□□□□ -0.58
DDR1-227ENST00000376570 TMCO1Q9UM00 188 aa11.4□□□□□ -0.58
DDR1-227ENST00000376570 CDC14AQ9UNH5 594 aa11.4□□□□□ -0.58
DDR1-227ENST00000376570 FAM32AQ9Y421 112 aaKnown RBP11.4□□□□□ -0.58
DDR1-227ENST00000376570 XIRP2A4UGR9 3374 aa11.4□□□□□ -0.58
DDR1-227ENST00000376570 XPNPEP2O43895 674 aa11.4□□□□□ -0.58
DDR1-227ENST00000376570 PAK4O96013 591 aaPredicted RBP11.4□□□□□ -0.58
DDR1-227ENST00000376570 PDYNP01213 254 aa11.4□□□□□ -0.58
DDR1-227ENST00000376570 CATP04040 527 aaKnown RBP11.4□□□□□ -0.58
DDR1-227ENST00000376570 TFAP2AP05549 437 aa11.4□□□□□ -0.58
DDR1-227ENST00000376570 ATP5BP06576 529 aaKnown RBP11.4□□□□□ -0.58
DDR1-227ENST00000376570 LAG3P18627 525 aa11.4□□□□□ -0.58
DDR1-227ENST00000376570 SLC6A2P23975 617 aa11.4□□□□□ -0.58
DDR1-227ENST00000376570 MAPK9P45984 424 aa11.4□□□□□ -0.58
DDR1-227ENST00000376570 ERVK-8P63133 956 aa11.4□□□□□ -0.58
DDR1-227ENST00000376570 GPR153Q6NV75 609 aa11.4□□□□□ -0.58
DDR1-227ENST00000376570 DUS1LQ6P1R4 473 aaKnown RBP11.4□□□□□ -0.58
DDR1-227ENST00000376570 VTCN1Q7Z7D3 282 aa11.4□□□□□ -0.58
DDR1-227ENST00000376570 MEX3DQ86XN8 651 aaKnown RBP11.4□□□□□ -0.58
DDR1-227ENST00000376570 P3H2Q8IVL5 708 aa11.4□□□□□ -0.58
DDR1-227ENST00000376570 SLC47A1Q96FL8 570 aa11.4□□□□□ -0.58
DDR1-227ENST00000376570 CGREF1Q99674 301 aa11.4□□□□□ -0.58
DDR1-227ENST00000376570 YIPF2Q9BWQ6 316 aa11.4□□□□□ -0.58
DDR1-227ENST00000376570 MARCH7Q9H992 704 aa11.4□□□□□ -0.58
DDR1-227ENST00000376570 VAPAQ9P0L0 249 aa11.4□□□□□ -0.58
DDR1-227ENST00000376570 SMIM30A4D0T7 59 aa11.4□□□□□ -0.59
DDR1-227ENST00000376570 K7EPI3 171 aa11.4□□□□□ -0.59
DDR1-227ENST00000376570 FPGTO14772 594 aa11.4□□□□□ -0.59
DDR1-227ENST00000376570 MITFO75030 526 aaPredicted RBP11.4□□□□□ -0.59
DDR1-227ENST00000376570 SRCP12931 536 aa11.4□□□□□ -0.59
DDR1-227ENST00000376570 IGFBP4P22692 258 aa11.4□□□□□ -0.59
DDR1-227ENST00000376570 RPL34P49207 117 aaKnown RBP11.4□□□□□ -0.59
DDR1-227ENST00000376570 DGKGP49619 791 aa11.4□□□□□ -0.59
DDR1-227ENST00000376570 RHDQ02161 417 aa11.4□□□□□ -0.59
DDR1-227ENST00000376570 HSPB3Q12988 150 aa11.4□□□□□ -0.59
DDR1-227ENST00000376570 TMEM26Q6ZUK4 368 aa11.4□□□□□ -0.59
DDR1-227ENST00000376570 EFL1Q7Z2Z2 1120 aaKnown RBP11.4□□□□□ -0.59
DDR1-227ENST00000376570 NXPE1Q8N323 547 aa11.4□□□□□ -0.59
DDR1-227ENST00000376570 FAM86B1Q8N7N1 296 aa11.4□□□□□ -0.59
DDR1-227ENST00000376570 TMBIM1Q969X1 311 aa11.4□□□□□ -0.59
DDR1-227ENST00000376570 NRBF2Q96F24 287 aa11.4□□□□□ -0.59
DDR1-227ENST00000376570 PPP3R2Q96LZ3 170 aa11.4□□□□□ -0.59
DDR1-227ENST00000376570 DERL2Q9GZP9 239 aa11.4□□□□□ -0.59
DDR1-227ENST00000376570 C1orf21Q9H246 121 aa11.4□□□□□ -0.59
DDR1-227ENST00000376570 OGDHLQ9ULD0 1010 aa11.4□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms