RNA–Protein interactions for RNA: ENST00000376237.8

HLA-C-202, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,538 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-202ENST00000376237 PCDHGA12O60330 932 aa22.28■■□□□ 1.16
HLA-C-202ENST00000376237 LRP3O75074 770 aa22.28■■□□□ 1.16
HLA-C-202ENST00000376237 LMNAP02545 664 aaKnown RBP22.28■■□□□ 1.16
HLA-C-202ENST00000376237 ZNF883P0CG24 379 aa22.28■■□□□ 1.16
HLA-C-202ENST00000376237 NEFHP12036 1026 aa22.28■■□□□ 1.16
HLA-C-202ENST00000376237 GGT5P36269 586 aa22.28■■□□□ 1.16
HLA-C-202ENST00000376237 NAA20P61599 178 aa22.28■■□□□ 1.16
HLA-C-202ENST00000376237 UBE2IP63279 158 aaKnown RBP22.28■■□□□ 1.16
HLA-C-202ENST00000376237 PRKG2Q13237 762 aa22.28■■□□□ 1.16
HLA-C-202ENST00000376237 SETDB1Q15047 1291 aa22.28■■□□□ 1.16
HLA-C-202ENST00000376237 C17orf82Q86X59 251 aaPredicted RBP22.28■■□□□ 1.16
HLA-C-202ENST00000376237 RAB3IL1Q8TBN0 382 aa22.28■■□□□ 1.16
HLA-C-202ENST00000376237 PHF21BQ96EK2 531 aa22.28■■□□□ 1.16
HLA-C-202ENST00000376237 HGH1Q9BTY7 390 aa22.28■■□□□ 1.16
HLA-C-202ENST00000376237 MECRQ9BV79 373 aa22.28■■□□□ 1.16
HLA-C-202ENST00000376237 GTPBP2Q9BX10 602 aaKnown RBP22.28■■□□□ 1.16
HLA-C-202ENST00000376237 RAB11FIP5Q9BXF6 653 aa22.28■■□□□ 1.16
HLA-C-202ENST00000376237 SMOC1Q9H4F8 434 aa22.28■■□□□ 1.16
HLA-C-202ENST00000376237 IL21RQ9HBE5 538 aa22.28■■□□□ 1.16
HLA-C-202ENST00000376237 SLC40A1Q9NP59 571 aa22.28■■□□□ 1.16
HLA-C-202ENST00000376237 NCKIPSDQ9NZQ3 722 aa22.28■■□□□ 1.16
HLA-C-202ENST00000376237 SPATA7Q9P0W8 599 aa22.28■■□□□ 1.16
HLA-C-202ENST00000376237 TRBV23OR9-2A0A075B6M9 112 aa22.27■■□□□ 1.16
HLA-C-202ENST00000376237 WDR91A4D1P6 747 aa22.27■■□□□ 1.16
HLA-C-202ENST00000376237 H2AFYO75367 372 aaKnown RBP22.27■■□□□ 1.16
HLA-C-202ENST00000376237 IMPDH1P20839 514 aa22.27■■□□□ 1.16
HLA-C-202ENST00000376237 FASLGP48023 281 aa22.27■■□□□ 1.16
HLA-C-202ENST00000376237 GRB7Q14451 532 aa22.27■■□□□ 1.16
HLA-C-202ENST00000376237 CCSMST1Q4G0I0 132 aa22.27■■□□□ 1.16
HLA-C-202ENST00000376237 MINDY1Q8N5J2 469 aa22.27■■□□□ 1.16
HLA-C-202ENST00000376237 GPR156Q8NFN8 814 aa22.27■■□□□ 1.16
HLA-C-202ENST00000376237 PATE1Q8WXA2 126 aa22.27■■□□□ 1.16
HLA-C-202ENST00000376237 WWOXQ9NZC7 414 aa22.27■■□□□ 1.16
HLA-C-202ENST00000376237 NOBOXO60393 691 aa22.26■■□□□ 1.15
HLA-C-202ENST00000376237 SLC16A8O95907 504 aa22.26■■□□□ 1.15
HLA-C-202ENST00000376237 GIMD1P0DJR0 217 aa22.26■■□□□ 1.15
HLA-C-202ENST00000376237 MDH1P40925 334 aaKnown RBP22.26■■□□□ 1.15
HLA-C-202ENST00000376237 HERVK_113P63132 956 aa22.26■■□□□ 1.15
HLA-C-202ENST00000376237 HHEXQ03014 270 aa22.26■■□□□ 1.15
HLA-C-202ENST00000376237 PCBP2Q15366 365 aaKnown RBP eCLIP22.26■■□□□ 1.151e-323■■■■■ 76.1
HLA-C-202ENST00000376237 PPP1R14CQ8TAE6 165 aa22.26■■□□□ 1.15
HLA-C-202ENST00000376237 SH3KBP1Q96B97 665 aa22.26■■□□□ 1.15
HLA-C-202ENST00000376237 L3HYPDHQ96EM0 354 aa22.26■■□□□ 1.15
HLA-C-202ENST00000376237 C1QTNF3Q9BXJ4 246 aa22.26■■□□□ 1.15
HLA-C-202ENST00000376237 ERVK-6Q9BXR3 956 aa22.26■■□□□ 1.15
HLA-C-202ENST00000376237 STOX2Q9P2F5 926 aaPredicted RBP22.26■■□□□ 1.15
HLA-C-202ENST00000376237 ZFC3H1O60293 1989 aaKnown RBP22.26■■□□□ 1.15
HLA-C-202ENST00000376237 PCDH15Q96QU1 1955 aa22.26■■□□□ 1.15
HLA-C-202ENST00000376237 ERGP11308 486 aa22.26■■□□□ 1.15
HLA-C-202ENST00000376237 IMPA1P29218 277 aa22.26■■□□□ 1.15
HLA-C-202ENST00000376237 SUZ12Q15022 739 aaKnown RBP22.26■■□□□ 1.15
HLA-C-202ENST00000376237 PDK4Q16654 411 aa22.26■■□□□ 1.15
HLA-C-202ENST00000376237 C14orf28Q4W4Y0 310 aa22.26■■□□□ 1.15
HLA-C-202ENST00000376237 TCEAL6Q6IPX3 200 aa22.26■■□□□ 1.15
HLA-C-202ENST00000376237 ZCCHC8Q6NZY4 707 aaKnown RBP22.26■■□□□ 1.15
HLA-C-202ENST00000376237 AGTRAPQ6RW13 159 aa22.26■■□□□ 1.15
HLA-C-202ENST00000376237 MBOAT1Q6ZNC8 495 aa22.26■■□□□ 1.15
HLA-C-202ENST00000376237 ARL14Q8N4G2 192 aa22.26■■□□□ 1.15
HLA-C-202ENST00000376237 ARL10Q8N8L6 244 aa22.26■■□□□ 1.15
HLA-C-202ENST00000376237 OR52E1Q8NGJ3 308 aa22.26■■□□□ 1.15
HLA-C-202ENST00000376237 OR4C6Q8NH72 309 aa22.26■■□□□ 1.15
HLA-C-202ENST00000376237 UBTD2Q8WUN7 234 aa22.26■■□□□ 1.15
HLA-C-202ENST00000376237 TCEAL3Q969E4 200 aa22.26■■□□□ 1.15
HLA-C-202ENST00000376237 CD244Q9BZW8 370 aa22.26■■□□□ 1.15
HLA-C-202ENST00000376237 PCDHGB2Q9Y5G2 931 aa22.26■■□□□ 1.15
HLA-C-202ENST00000376237 TP53BP1Q12888 1972 aaPredicted RBP22.25■■□□□ 1.15
HLA-C-202ENST00000376237 LNP1A1A4G5 178 aa22.25■■□□□ 1.15
HLA-C-202ENST00000376237 POLR3GO15318 223 aaPredicted RBP22.25■■□□□ 1.15
HLA-C-202ENST00000376237 TAPBPO15533 448 aa22.25■■□□□ 1.15
HLA-C-202ENST00000376237 GRK2P25098 689 aa22.25■■□□□ 1.15
HLA-C-202ENST00000376237 RAB28P51157 221 aa22.25■■□□□ 1.15
HLA-C-202ENST00000376237 PNLIPRP1P54315 467 aa22.25■■□□□ 1.15
HLA-C-202ENST00000376237 NAGLUP54802 743 aa22.25■■□□□ 1.15
HLA-C-202ENST00000376237 BIRC2Q13490 618 aa22.25■■□□□ 1.15
HLA-C-202ENST00000376237 CYP2A13Q16696 494 aa22.25■■□□□ 1.15
HLA-C-202ENST00000376237 ZNF678Q5SXM1 525 aa22.25■■□□□ 1.15
HLA-C-202ENST00000376237 ANKS6Q68DC2 871 aa22.25■■□□□ 1.15
HLA-C-202ENST00000376237 GATAD2AQ86YP4 633 aa22.25■■□□□ 1.15
HLA-C-202ENST00000376237 HMGCLL1Q8TB92 370 aa22.25■■□□□ 1.15
HLA-C-202ENST00000376237 ZNF480Q8WV37 535 aa22.25■■□□□ 1.15
HLA-C-202ENST00000376237 CKAP2Q8WWK9 683 aa22.25■■□□□ 1.15
HLA-C-202ENST00000376237 MENTQ9BUN1 341 aa22.25■■□□□ 1.15
HLA-C-202ENST00000376237 LDHAL6BQ9BYZ2 381 aaPredicted RBP22.25■■□□□ 1.15
HLA-C-202ENST00000376237 UCK1Q9HA47 277 aa22.25■■□□□ 1.15
HLA-C-202ENST00000376237 DNAAF2Q9NVR5 837 aaKnown RBP22.25■■□□□ 1.15
HLA-C-202ENST00000376237 NCDNQ9UBB6 729 aa22.25■■□□□ 1.15
HLA-C-202ENST00000376237 STK16O75716 305 aa22.24■■□□□ 1.15
HLA-C-202ENST00000376237 FGF3P11487 239 aaPredicted RBP22.24■■□□□ 1.15
HLA-C-202ENST00000376237 CCND1P24385 295 aa22.24■■□□□ 1.15
HLA-C-202ENST00000376237 SHMT2P34897 504 aa22.24■■□□□ 1.15
HLA-C-202ENST00000376237 TUBB8Q3ZCM7 444 aa22.24■■□□□ 1.15
HLA-C-202ENST00000376237 CFAP157Q5JU67 520 aa22.24■■□□□ 1.15
HLA-C-202ENST00000376237 CHCHD2P9Q5T1J5 151 aaPredicted RBP22.24■■□□□ 1.15
HLA-C-202ENST00000376237 ATG16L1Q676U5 607 aa22.24■■□□□ 1.15
HLA-C-202ENST00000376237 SYTL1Q8IYJ3 562 aa22.24■■□□□ 1.15
HLA-C-202ENST00000376237 MAGEB18Q96M61 343 aa22.24■■□□□ 1.15
HLA-C-202ENST00000376237 TMEM237Q96Q45 408 aa22.24■■□□□ 1.15
HLA-C-202ENST00000376237 MANSC1Q9H8J5 431 aa22.24■■□□□ 1.15
HLA-C-202ENST00000376237 TDRD6O60522 2096 aaKnown RBP22.24■■□□□ 1.15
HLA-C-202ENST00000376237 FAM221BA6H8Z2 402 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms