RNA–Protein interactions for RNA: ENST00000375597.8

MCF2L-202, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,413 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-202ENST00000375597 PADI4Q9UM07 663 aa11.54□□□□□ -0.56
MCF2L-202ENST00000375597 LCHNA4D1U4 455 aa11.54□□□□□ -0.56
MCF2L-202ENST00000375597 MROH6A6NGR9 719 aa11.54□□□□□ -0.56
MCF2L-202ENST00000375597 IFRD1O00458 451 aaPredicted RBP11.54□□□□□ -0.56
MCF2L-202ENST00000375597 KPNA4O00629 521 aaPredicted RBP11.54□□□□□ -0.56
MCF2L-202ENST00000375597 TBL1XO60907 577 aa11.54□□□□□ -0.56
MCF2L-202ENST00000375597 SOAT1P35610 550 aa11.54□□□□□ -0.56
MCF2L-202ENST00000375597 DCTP40126 519 aa11.54□□□□□ -0.56
MCF2L-202ENST00000375597 MRPS15P82914 257 aaKnown RBP11.54□□□□□ -0.56
MCF2L-202ENST00000375597 SETMARQ53H47 684 aaPredicted RBP11.54□□□□□ -0.56
MCF2L-202ENST00000375597 IER5LQ5T953 404 aa11.54□□□□□ -0.56
MCF2L-202ENST00000375597 MFSD14CQ5VZR4 134 aa11.54□□□□□ -0.56
MCF2L-202ENST00000375597 ZFAND4Q86XD8 727 aa11.54□□□□□ -0.56
MCF2L-202ENST00000375597 HIPK1Q86Z02 1210 aa11.54□□□□□ -0.56
MCF2L-202ENST00000375597 RBM12BQ8IXT5 1001 aaKnown RBP11.54□□□□□ -0.56
MCF2L-202ENST00000375597 FAM83FQ8NEG4 500 aaPredicted RBP11.54□□□□□ -0.56
MCF2L-202ENST00000375597 PGAP3Q96FM1 320 aaPredicted RBP11.54□□□□□ -0.56
MCF2L-202ENST00000375597 SH3YL1Q96HL8 342 aaPredicted RBP11.54□□□□□ -0.56
MCF2L-202ENST00000375597 Q96MT0 163 aa11.54□□□□□ -0.56
MCF2L-202ENST00000375597 TSEN34Q9BSV6 310 aaKnown RBP11.54□□□□□ -0.56
MCF2L-202ENST00000375597 SMG9Q9H0W8 520 aaKnown RBP11.54□□□□□ -0.56
MCF2L-202ENST00000375597 KRT84Q9NSB2 600 aa11.54□□□□□ -0.56
MCF2L-202ENST00000375597 SCN3BQ9NY72 215 aa11.54□□□□□ -0.56
MCF2L-202ENST00000375597 SLCO3A1Q9UIG8 710 aa11.54□□□□□ -0.56
MCF2L-202ENST00000375597 ZNF99A8MXY4 864 aaPredicted RBP11.53□□□□□ -0.56
MCF2L-202ENST00000375597 EEDO75530 441 aaKnown RBP11.53□□□□□ -0.56
MCF2L-202ENST00000375597 SERPINB7O75635 380 aa11.53□□□□□ -0.56
MCF2L-202ENST00000375597 STATHP02808 62 aa11.53□□□□□ -0.56
MCF2L-202ENST00000375597 SLC10A3P09131 477 aa11.53□□□□□ -0.56
MCF2L-202ENST00000375597 ZNF865P0CJ78 1059 aaPredicted RBP11.53□□□□□ -0.56
MCF2L-202ENST00000375597 BMP4P12644 408 aa11.53□□□□□ -0.56
MCF2L-202ENST00000375597 DCKP27707 260 aa11.53□□□□□ -0.56
MCF2L-202ENST00000375597 DBPQ10586 325 aaPredicted RBP11.53□□□□□ -0.56
MCF2L-202ENST00000375597 ABRQ12979 859 aa11.53□□□□□ -0.56
MCF2L-202ENST00000375597 MED22Q15528 200 aa11.53□□□□□ -0.56
MCF2L-202ENST00000375597 CARD16Q5EG05 197 aa11.53□□□□□ -0.56
MCF2L-202ENST00000375597 RSBN1Q5VWQ0 802 aaPredicted RBP11.53□□□□□ -0.56
MCF2L-202ENST00000375597 DLEU7Q6UYE1 221 aa11.53□□□□□ -0.56
MCF2L-202ENST00000375597 TAS1R1Q7RTX1 841 aa11.53□□□□□ -0.56
MCF2L-202ENST00000375597 MEX3DQ86XN8 651 aaKnown RBP11.53□□□□□ -0.56
MCF2L-202ENST00000375597 NKAPQ8N5F7 415 aaKnown RBP11.53□□□□□ -0.56
MCF2L-202ENST00000375597 ZFYVE19Q96K21 471 aa11.53□□□□□ -0.56
MCF2L-202ENST00000375597 ACAT2Q9BWD1 397 aa11.53□□□□□ -0.56
MCF2L-202ENST00000375597 ACTL8Q9H568 366 aa11.53□□□□□ -0.56
MCF2L-202ENST00000375597 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.53□□□□□ -0.56
MCF2L-202ENST00000375597 SLC25A37Q9NYZ2 338 aa11.53□□□□□ -0.56
MCF2L-202ENST00000375597 ABCD2Q9UBJ2 740 aa11.53□□□□□ -0.56
MCF2L-202ENST00000375597 GNG14A0A1W2PPG7 69 aa11.53□□□□□ -0.56
MCF2L-202ENST00000375597 PFDN6O15212 129 aa11.53□□□□□ -0.56
MCF2L-202ENST00000375597 RAD51BO15315 384 aa11.53□□□□□ -0.56
MCF2L-202ENST00000375597 ENO2P09104 434 aaPredicted RBP11.53□□□□□ -0.56
MCF2L-202ENST00000375597 ACPPP15309 386 aa11.53□□□□□ -0.56
MCF2L-202ENST00000375597 OR1D2P34982 312 aa11.53□□□□□ -0.56
MCF2L-202ENST00000375597 GP2P55259 537 aaKnown RBP11.53□□□□□ -0.56
MCF2L-202ENST00000375597 NKX3-2P78367 333 aa11.53□□□□□ -0.56
MCF2L-202ENST00000375597 EMX2Q04743 252 aa11.53□□□□□ -0.56
MCF2L-202ENST00000375597 RSPO2Q6UXX9 243 aaPredicted RBP11.53□□□□□ -0.56
MCF2L-202ENST00000375597 SPATA19Q7Z5L4 167 aa11.53□□□□□ -0.56
MCF2L-202ENST00000375597 SPRED1Q7Z699 444 aa11.53□□□□□ -0.56
MCF2L-202ENST00000375597 ADHFE1Q8IWW8 467 aa11.53□□□□□ -0.56
MCF2L-202ENST00000375597 DTX3Q8N9I9 347 aa11.53□□□□□ -0.56
MCF2L-202ENST00000375597 TTC29Q8NA56 475 aaPredicted RBP11.53□□□□□ -0.56
MCF2L-202ENST00000375597 CEP19Q96LK0 163 aa11.53□□□□□ -0.56
MCF2L-202ENST00000375597 ELOVL2Q9NXB9 296 aa11.53□□□□□ -0.56
MCF2L-202ENST00000375597 C2orf78A6NCI8 922 aa11.53□□□□□ -0.56
MCF2L-202ENST00000375597 ANKRD66B4E2M5 251 aa11.53□□□□□ -0.56
MCF2L-202ENST00000375597 SMAD6O43541 496 aaKnown RBP11.53□□□□□ -0.56
MCF2L-202ENST00000375597 CRATP43155 626 aa11.53□□□□□ -0.56
MCF2L-202ENST00000375597 GNPDA1P46926 289 aa11.53□□□□□ -0.56
MCF2L-202ENST00000375597 CD97P48960 835 aa11.53□□□□□ -0.56
MCF2L-202ENST00000375597 ST13P50502 369 aaKnown RBP11.53□□□□□ -0.56
MCF2L-202ENST00000375597 ADAM17P78536 824 aa11.53□□□□□ -0.56
MCF2L-202ENST00000375597 SMARCB1Q12824 385 aa11.53□□□□□ -0.56
MCF2L-202ENST00000375597 KCNA10Q16322 511 aa11.53□□□□□ -0.56
MCF2L-202ENST00000375597 INAVAQ3KP66 663 aa11.53□□□□□ -0.56
MCF2L-202ENST00000375597 FAM171BQ6P995 826 aa11.53□□□□□ -0.56
MCF2L-202ENST00000375597 DEFB128Q7Z7B8 93 aa11.53□□□□□ -0.56
MCF2L-202ENST00000375597 C11orf96Q7Z7L8 435 aa11.53□□□□□ -0.56
MCF2L-202ENST00000375597 UMODL1-AS1Q8N2C9 162 aa11.53□□□□□ -0.56
MCF2L-202ENST00000375597 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.53□□□□□ -0.56
MCF2L-202ENST00000375597 NELL1Q92832 810 aa11.53□□□□□ -0.56
MCF2L-202ENST00000375597 MS4A4AQ96JQ5 239 aa11.53□□□□□ -0.56
MCF2L-202ENST00000375597 CD320Q9NPF0 282 aa11.53□□□□□ -0.56
MCF2L-202ENST00000375597 ATAD3AQ9NVI7 634 aa11.53□□□□□ -0.56
MCF2L-202ENST00000375597 ACSL6Q9UKU0 697 aa11.53□□□□□ -0.56
MCF2L-202ENST00000375597 SARDHQ9UL12 918 aa11.53□□□□□ -0.56
MCF2L-202ENST00000375597 SLC22A14Q9Y267 594 aa11.53□□□□□ -0.56
MCF2L-202ENST00000375597 ERGIC3Q9Y282 383 aa11.53□□□□□ -0.56
MCF2L-202ENST00000375597 GIT1Q9Y2X7 761 aa11.53□□□□□ -0.56
MCF2L-202ENST00000375597 CPQQ9Y646 472 aa11.53□□□□□ -0.56
MCF2L-202ENST00000375597 GMEB1Q9Y692 573 aa11.53□□□□□ -0.56
MCF2L-202ENST00000375597 SZT2Q5T011 3432 aa11.52□□□□□ -0.56
MCF2L-202ENST00000375597 EVPLLA8MZ36 301 aa11.52□□□□□ -0.57
MCF2L-202ENST00000375597 FAM227AF5H4B4 570 aa11.52□□□□□ -0.57
MCF2L-202ENST00000375597 COX7A2P14406 83 aa11.52□□□□□ -0.57
MCF2L-202ENST00000375597 EPB42P16452 691 aa11.52□□□□□ -0.57
MCF2L-202ENST00000375597 CYP2C18P33260 490 aa11.52□□□□□ -0.57
MCF2L-202ENST00000375597 HNF4AP41235 474 aa11.52□□□□□ -0.57
MCF2L-202ENST00000375597 ADARB1P78563 741 aaKnown RBP11.52□□□□□ -0.57
MCF2L-202ENST00000375597 NFKB2Q00653 900 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms