RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 SNX6Q9UNH7 406 aa11.91□□□□□ -0.5
C9orf3-203ENST00000375315 ORC6Q9Y5N6 252 aa11.91□□□□□ -0.5
C9orf3-203ENST00000375315 PLK4O00444 970 aa11.91□□□□□ -0.5
C9orf3-203ENST00000375315 FADS2O95864 444 aaKnown RBP11.91□□□□□ -0.5
C9orf3-203ENST00000375315 PRLP01236 227 aa11.91□□□□□ -0.5
C9orf3-203ENST00000375315 CYP11A1P05108 521 aa11.91□□□□□ -0.5
C9orf3-203ENST00000375315 ALDOCP09972 364 aaKnown RBP11.91□□□□□ -0.5
C9orf3-203ENST00000375315 IRF1P10914 325 aa11.91□□□□□ -0.5
C9orf3-203ENST00000375315 CHRM3P20309 590 aa11.91□□□□□ -0.5
C9orf3-203ENST00000375315 FSHRP23945 695 aa11.91□□□□□ -0.5
C9orf3-203ENST00000375315 HTR1EP28566 365 aa11.91□□□□□ -0.5
C9orf3-203ENST00000375315 TGFBR1P36897 503 aa11.91□□□□□ -0.5
C9orf3-203ENST00000375315 TPI1P60174 286 aa11.91□□□□□ -0.5
C9orf3-203ENST00000375315 RAB10P61026 200 aa11.91□□□□□ -0.5
C9orf3-203ENST00000375315 FUT11Q495W5 492 aa11.91□□□□□ -0.5
C9orf3-203ENST00000375315 C10orf120Q5SQS8 335 aa11.91□□□□□ -0.5
C9orf3-203ENST00000375315 GLYATQ6IB77 296 aa11.91□□□□□ -0.5
C9orf3-203ENST00000375315 CES5AQ6NT32 575 aa11.91□□□□□ -0.5
C9orf3-203ENST00000375315 XKRXQ6PP77 449 aa11.91□□□□□ -0.5
C9orf3-203ENST00000375315 DPY19L3Q6ZPD9 716 aa11.91□□□□□ -0.5
C9orf3-203ENST00000375315 C7orf61Q8IZ16 206 aa11.91□□□□□ -0.5
C9orf3-203ENST00000375315 SETD9Q8NE22 299 aa11.91□□□□□ -0.5
C9orf3-203ENST00000375315 ST13P5Q8NFI4 369 aaPredicted RBP11.91□□□□□ -0.5
C9orf3-203ENST00000375315 SETD6Q8TBK2 473 aa11.91□□□□□ -0.5
C9orf3-203ENST00000375315 ZFAND1Q8TCF1 268 aa11.91□□□□□ -0.5
C9orf3-203ENST00000375315 BADQ92934 168 aa11.91□□□□□ -0.5
C9orf3-203ENST00000375315 C19orf60Q96EN9 201 aa11.91□□□□□ -0.5
C9orf3-203ENST00000375315 NPY6RQ99463 290 aa11.91□□□□□ -0.5
C9orf3-203ENST00000375315 CCDC32Q9BV29 185 aa11.91□□□□□ -0.5
C9orf3-203ENST00000375315 CYP4F12Q9HCS2 524 aa11.91□□□□□ -0.5
C9orf3-203ENST00000375315 HCN4Q9Y3Q4 1203 aa11.91□□□□□ -0.5
C9orf3-203ENST00000375315 ZFC3H1O60293 1989 aaKnown RBP11.91□□□□□ -0.5
C9orf3-203ENST00000375315 EYSQ5T1H1 3165 aa11.9□□□□□ -0.5
C9orf3-203ENST00000375315 H3BMM5 538 aa11.9□□□□□ -0.5
C9orf3-203ENST00000375315 PRMT5O14744 637 aaPredicted RBP11.9□□□□□ -0.5
C9orf3-203ENST00000375315 AIREO43918 545 aa11.9□□□□□ -0.5
C9orf3-203ENST00000375315 MFSD11O43934 449 aa11.9□□□□□ -0.5
C9orf3-203ENST00000375315 NOBOXO60393 691 aa11.9□□□□□ -0.5
C9orf3-203ENST00000375315 SLITRK5O94991 958 aa11.9□□□□□ -0.5
C9orf3-203ENST00000375315 SLC26A3P40879 764 aa11.9□□□□□ -0.5
C9orf3-203ENST00000375315 PGGT1BP53609 377 aa11.9□□□□□ -0.5
C9orf3-203ENST00000375315 OLIG2Q13516 323 aa11.9□□□□□ -0.5
C9orf3-203ENST00000375315 PARP15Q460N3 678 aa11.9□□□□□ -0.5
C9orf3-203ENST00000375315 GPAT3Q53EU6 434 aa11.9□□□□□ -0.5
C9orf3-203ENST00000375315 PLCZ1Q86YW0 608 aa11.9□□□□□ -0.5
C9orf3-203ENST00000375315 SVOPLQ8N434 492 aa11.9□□□□□ -0.5
C9orf3-203ENST00000375315 CNIH3Q8TBE1 160 aa11.9□□□□□ -0.5
C9orf3-203ENST00000375315 GIMAP1Q8WWP7 306 aa11.9□□□□□ -0.5
C9orf3-203ENST00000375315 METTL2AQ96IZ6 378 aaKnown RBP11.9□□□□□ -0.5
C9orf3-203ENST00000375315 MCMBPQ9BTE3 642 aa11.9□□□□□ -0.5
C9orf3-203ENST00000375315 C1QTNF7Q9BXJ2 289 aa11.9□□□□□ -0.5
C9orf3-203ENST00000375315 ROGDIQ9GZN7 287 aa11.9□□□□□ -0.5
C9orf3-203ENST00000375315 CERS4Q9HA82 394 aa11.9□□□□□ -0.5
C9orf3-203ENST00000375315 ZBTB20Q9HC78 741 aaPredicted RBP11.9□□□□□ -0.5
C9orf3-203ENST00000375315 CCNB1IP1Q9NPC3 277 aa11.9□□□□□ -0.5
C9orf3-203ENST00000375315 EXD2Q9NVH0 621 aa11.9□□□□□ -0.5
C9orf3-203ENST00000375315 SMPD4Q9NXE4 827 aa11.9□□□□□ -0.5
C9orf3-203ENST00000375315 UBP1Q9NZI7 540 aa11.9□□□□□ -0.5
C9orf3-203ENST00000375315 OR12D3Q9UGF7 316 aa11.9□□□□□ -0.5
C9orf3-203ENST00000375315 ATPIF1Q9UII2 106 aa11.9□□□□□ -0.5
C9orf3-203ENST00000375315 MAGEL2Q9UJ55 1249 aa11.9□□□□□ -0.5
C9orf3-203ENST00000375315 NEMP2A6NFY4 417 aa11.9□□□□□ -0.5
C9orf3-203ENST00000375315 GNGT2O14610 69 aa11.9□□□□□ -0.5
C9orf3-203ENST00000375315 SUPT7LO94864 414 aa11.9□□□□□ -0.5
C9orf3-203ENST00000375315 PSKH1P11801 424 aa11.9□□□□□ -0.5
C9orf3-203ENST00000375315 ERCC2P18074 760 aa11.9□□□□□ -0.5
C9orf3-203ENST00000375315 ADRA1BP35368 520 aa11.9□□□□□ -0.5
C9orf3-203ENST00000375315 RPS5P46782 204 aaKnown RBP11.9□□□□□ -0.5
C9orf3-203ENST00000375315 UGP2Q16851 508 aa11.9□□□□□ -0.5
C9orf3-203ENST00000375315 UGT3A2Q3SY77 523 aa11.9□□□□□ -0.5
C9orf3-203ENST00000375315 TOR2AQ5JU69 321 aa11.9□□□□□ -0.5
C9orf3-203ENST00000375315 SULT1C3Q6IMI6 304 aa11.9□□□□□ -0.5
C9orf3-203ENST00000375315 EFL1Q7Z2Z2 1120 aaKnown RBP11.9□□□□□ -0.5
C9orf3-203ENST00000375315 NRARPQ7Z6K4 114 aa11.9□□□□□ -0.5
C9orf3-203ENST00000375315 SCD5Q86SK9 330 aa11.9□□□□□ -0.5
C9orf3-203ENST00000375315 LILRB1Q8NHL6 650 aaPredicted RBP11.9□□□□□ -0.5
C9orf3-203ENST00000375315 ITFG1Q8TB96 612 aa11.9□□□□□ -0.5
C9orf3-203ENST00000375315 SLC7A6Q92536 515 aa11.9□□□□□ -0.5
C9orf3-203ENST00000375315 VWCEQ96DN2 955 aa11.9□□□□□ -0.5
C9orf3-203ENST00000375315 CCDC120Q96HB5 630 aa11.9□□□□□ -0.5
C9orf3-203ENST00000375315 GPR78Q96P69 363 aa11.9□□□□□ -0.5
C9orf3-203ENST00000375315 RANGRFQ9HD47 186 aaPredicted RBP11.9□□□□□ -0.5
C9orf3-203ENST00000375315 TNFRSF12AQ9NP84 129 aa11.9□□□□□ -0.5
C9orf3-203ENST00000375315 TIGARQ9NQ88 270 aa11.9□□□□□ -0.5
C9orf3-203ENST00000375315 UCKL1Q9NWZ5 548 aa11.9□□□□□ -0.5
C9orf3-203ENST00000375315 MEIOCA2RUB1 952 aa11.89□□□□□ -0.51
C9orf3-203ENST00000375315 MTMR11A4FU01 709 aa11.89□□□□□ -0.51
C9orf3-203ENST00000375315 DFFAO00273 331 aa11.89□□□□□ -0.51
C9orf3-203ENST00000375315 DPYSL4O14531 572 aa11.89□□□□□ -0.51
C9orf3-203ENST00000375315 BCKDKO14874 412 aa11.89□□□□□ -0.51
C9orf3-203ENST00000375315 RGS10O43665 173 aa11.89□□□□□ -0.51
C9orf3-203ENST00000375315 HS6ST1O60243 411 aa11.89□□□□□ -0.51
C9orf3-203ENST00000375315 PGLSO95336 258 aa11.89□□□□□ -0.51
C9orf3-203ENST00000375315 MT-ND2P03891 347 aa11.89□□□□□ -0.51
C9orf3-203ENST00000375315 TYMPP19971 482 aa11.89□□□□□ -0.51
C9orf3-203ENST00000375315 HNF4AP41235 474 aa11.89□□□□□ -0.51
C9orf3-203ENST00000375315 NDUFAF5Q5TEU4 345 aa11.89□□□□□ -0.51
C9orf3-203ENST00000375315 CIR1Q86X95 450 aaPredicted RBP11.89□□□□□ -0.51
C9orf3-203ENST00000375315 SPATA6LQ8N4H0 392 aa11.89□□□□□ -0.51
C9orf3-203ENST00000375315 DTX3Q8N9I9 347 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms