RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.5□□□□□ -1.371e-6■□□□□ 10.9
UBR4-204ENST00000375254 SLC17A7Q9P2U7 560 aa6.5□□□□□ -1.37
UBR4-204ENST00000375254 ADAM18Q9Y3Q7 739 aa6.5□□□□□ -1.37
UBR4-204ENST00000375254 CYBBP04839 570 aa6.5□□□□□ -1.37
UBR4-204ENST00000375254 KIR3DL1P43629 444 aa6.5□□□□□ -1.37
UBR4-204ENST00000375254 HSPA7P48741 367 aa6.5□□□□□ -1.37
UBR4-204ENST00000375254 RPS27AP62979 156 aaKnown RBP6.5□□□□□ -1.37
UBR4-204ENST00000375254 UBA52P62987 128 aaKnown RBP6.5□□□□□ -1.37
UBR4-204ENST00000375254 KCNN1Q92952 543 aa6.5□□□□□ -1.37
UBR4-204ENST00000375254 SLC25A36Q96CQ1 311 aa6.5□□□□□ -1.37
UBR4-204ENST00000375254 LIN28AQ9H9Z2 209 aaKnown RBP6.5□□□□□ -1.37
UBR4-204ENST00000375254 RPS10P5Q9NQ39 176 aa6.5□□□□□ -1.37
UBR4-204ENST00000375254 EIF2B3Q9NR50 452 aaKnown RBP6.5□□□□□ -1.37
UBR4-204ENST00000375254 A0A1W2PP18 115 aa6.5□□□□□ -1.37
UBR4-204ENST00000375254 PRKAB2O43741 272 aa6.5□□□□□ -1.37
UBR4-204ENST00000375254 MT-ND5P03915 603 aa6.5□□□□□ -1.37
UBR4-204ENST00000375254 TTPAP49638 278 aa6.5□□□□□ -1.37
UBR4-204ENST00000375254 UQCC3Q6UW78 93 aa6.5□□□□□ -1.37
UBR4-204ENST00000375254 LRRC57Q8N9N7 239 aa6.5□□□□□ -1.37
UBR4-204ENST00000375254 CANT1Q8WVQ1 401 aa6.5□□□□□ -1.37
UBR4-204ENST00000375254 MYRFLQ96LU7 910 aa6.5□□□□□ -1.37
UBR4-204ENST00000375254 TNKS2Q9H2K2 1166 aa6.5□□□□□ -1.37
UBR4-204ENST00000375254 FAM212BQ9NTI7 297 aaPredicted RBP6.5□□□□□ -1.37
UBR4-204ENST00000375254 TMEM181Q9P2C4 612 aa6.5□□□□□ -1.37
UBR4-204ENST00000375254 A0A1W2PPL8 197 aa6.5□□□□□ -1.37
UBR4-204ENST00000375254 QSOX1O00391 747 aa6.5□□□□□ -1.37
UBR4-204ENST00000375254 BET1O15155 118 aa6.5□□□□□ -1.37
UBR4-204ENST00000375254 SDC3O75056 442 aa6.5□□□□□ -1.37
UBR4-204ENST00000375254 SERPIND1P05546 499 aa6.5□□□□□ -1.37
UBR4-204ENST00000375254 ADRB1P08588 477 aa6.5□□□□□ -1.37
UBR4-204ENST00000375254 CKMT2P17540 419 aa6.5□□□□□ -1.37
UBR4-204ENST00000375254 PTBP1P26599 531 aaKnown RBP eCLIP6.5□□□□□ -1.378e-8■■■■■ 40.1
UBR4-204ENST00000375254 MLLT3P42568 568 aaPredicted RBP6.5□□□□□ -1.37
UBR4-204ENST00000375254 RAB1AP62820 205 aa6.5□□□□□ -1.37
UBR4-204ENST00000375254 STK35Q8TDR2 534 aa6.5□□□□□ -1.37
UBR4-204ENST00000375254 ELP4Q96EB1 424 aa6.5□□□□□ -1.37
UBR4-204ENST00000375254 POLR2J3Q9H1A7 115 aaKnown RBP6.5□□□□□ -1.37
UBR4-204ENST00000375254 RNF215Q9Y6U7 377 aa6.5□□□□□ -1.37
UBR4-204ENST00000375254 IGSF9BQ9UPX0 1349 aa6.5□□□□□ -1.37
UBR4-204ENST00000375254 ARHGAP1Q07960 439 aa6.5□□□□□ -1.37
UBR4-204ENST00000375254 CD47Q08722 323 aa6.5□□□□□ -1.37
UBR4-204ENST00000375254 CHRNA6Q15825 494 aa6.5□□□□□ -1.37
UBR4-204ENST00000375254 COQ5Q5HYK3 327 aa6.5□□□□□ -1.37
UBR4-204ENST00000375254 IER5Q5VY09 327 aa6.5□□□□□ -1.37
UBR4-204ENST00000375254 TIPARPQ7Z3E1 657 aaKnown RBP6.5□□□□□ -1.37
UBR4-204ENST00000375254 DNAJC10Q8IXB1 793 aa6.5□□□□□ -1.37
UBR4-204ENST00000375254 TOLLIPQ9H0E2 274 aa6.5□□□□□ -1.37
UBR4-204ENST00000375254 ERVMER34-1Q9H9K5 563 aa6.5□□□□□ -1.37
UBR4-204ENST00000375254 SLC27A6Q9Y2P4 619 aa6.5□□□□□ -1.37
UBR4-204ENST00000375254 KDM5CP41229 1560 aa6.5□□□□□ -1.37
UBR4-204ENST00000375254 ARGFXA6NJG6 315 aa6.5□□□□□ -1.37
UBR4-204ENST00000375254 NEDD8-MDP1E9PL57 170 aa6.5□□□□□ -1.37
UBR4-204ENST00000375254 CRTC1Q6UUV9 634 aa6.5□□□□□ -1.37
UBR4-204ENST00000375254 SLC47A2Q86VL8 602 aa6.5□□□□□ -1.37
UBR4-204ENST00000375254 TNS4Q8IZW8 715 aa6.5□□□□□ -1.37
UBR4-204ENST00000375254 OR56B4Q8NH76 319 aa6.5□□□□□ -1.37
UBR4-204ENST00000375254 MYLIPQ8WY64 445 aa6.5□□□□□ -1.37
UBR4-204ENST00000375254 SMARCD1Q96GM5 515 aa6.5□□□□□ -1.37
UBR4-204ENST00000375254 GOLGA4Q13439 2230 aaKnown RBP6.5□□□□□ -1.37
UBR4-204ENST00000375254 KCNU1A8MYU2 1149 aa6.5□□□□□ -1.37
UBR4-204ENST00000375254 SC5DO75845 299 aa6.5□□□□□ -1.37
UBR4-204ENST00000375254 C2P06681 752 aa6.5□□□□□ -1.37
UBR4-204ENST00000375254 MMP7P09237 267 aaPredicted RBP6.5□□□□□ -1.37
UBR4-204ENST00000375254 TPSB2P20231 275 aa6.5□□□□□ -1.37
UBR4-204ENST00000375254 DNAJB13P59910 316 aa6.5□□□□□ -1.37
UBR4-204ENST00000375254 ERVK-21P61565 698 aa6.5□□□□□ -1.37
UBR4-204ENST00000375254 DBPQ10586 325 aaPredicted RBP6.5□□□□□ -1.37
UBR4-204ENST00000375254 BMPR2Q13873 1038 aa6.5□□□□□ -1.37
UBR4-204ENST00000375254 MAD2L1BPQ15013 274 aaPredicted RBP6.5□□□□□ -1.37
UBR4-204ENST00000375254 TPSAB1Q15661 275 aa6.5□□□□□ -1.37
UBR4-204ENST00000375254 DESI1Q6ICB0 168 aa6.5□□□□□ -1.37
UBR4-204ENST00000375254 ATG9AQ7Z3C6 839 aa6.5□□□□□ -1.37
UBR4-204ENST00000375254 TMPRSS11BQ86T26 416 aa6.5□□□□□ -1.37
UBR4-204ENST00000375254 SELENOMQ8WWX9 145 aa6.5□□□□□ -1.37
UBR4-204ENST00000375254 THG1LQ9NWX6 298 aaKnown RBP6.5□□□□□ -1.37
UBR4-204ENST00000375254 ZNF214Q9UL59 606 aaPredicted RBP6.5□□□□□ -1.37
UBR4-204ENST00000375254 FABP1P07148 127 aa6.5□□□□□ -1.37
UBR4-204ENST00000375254 HOXC6P09630 235 aa6.5□□□□□ -1.37
UBR4-204ENST00000375254 ARMC10Q8N2F6 343 aa6.5□□□□□ -1.37
UBR4-204ENST00000375254 OR51D1Q8NGF3 324 aa6.5□□□□□ -1.37
UBR4-204ENST00000375254 OR8J3Q8NGG0 315 aa6.5□□□□□ -1.37
UBR4-204ENST00000375254 ZBTB8AQ96BR9 441 aa6.5□□□□□ -1.37
UBR4-204ENST00000375254 TBL1YQ9BQ87 522 aa6.5□□□□□ -1.37
UBR4-204ENST00000375254 ZBTB26Q9HCK0 441 aa6.5□□□□□ -1.37
UBR4-204ENST00000375254 HOXA2O43364 376 aa6.5□□□□□ -1.37
UBR4-204ENST00000375254 TSPAN8P19075 237 aa6.5□□□□□ -1.37
UBR4-204ENST00000375254 CAPN3P20807 821 aa6.5□□□□□ -1.37
UBR4-204ENST00000375254 ZDHHC20Q5W0Z9 365 aa6.5□□□□□ -1.37
UBR4-204ENST00000375254 CXorf57Q6NSI4 855 aaKnown RBP6.5□□□□□ -1.37
UBR4-204ENST00000375254 LINGO4Q6UY18 593 aa6.5□□□□□ -1.37
UBR4-204ENST00000375254 FOXRED2Q8IWF2 684 aa6.5□□□□□ -1.37
UBR4-204ENST00000375254 KLHDC1Q8N7A1 406 aa6.5□□□□□ -1.37
UBR4-204ENST00000375254 PAPD5Q8NDF8 572 aaKnown RBP6.5□□□□□ -1.37
UBR4-204ENST00000375254 NDC1Q9BTX1 674 aa6.5□□□□□ -1.37
UBR4-204ENST00000375254 CHST7Q9NS84 486 aa6.5□□□□□ -1.37
UBR4-204ENST00000375254 MC3RP41968 323 aa6.5□□□□□ -1.37
UBR4-204ENST00000375254 PMPCAQ10713 525 aa6.5□□□□□ -1.37
UBR4-204ENST00000375254 SPCS2Q15005 226 aa6.5□□□□□ -1.37
UBR4-204ENST00000375254 ADGRF4Q8IZF3 695 aa6.5□□□□□ -1.37
UBR4-204ENST00000375254 MRPS31Q92665 395 aaKnown RBP6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms