RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 CAB39LQ9H9S4 337 aa8.83□□□□□ -1
UBR4-201ENST00000375218 MCCC2Q9HCC0 563 aa8.83□□□□□ -1
UBR4-201ENST00000375218 MAN2C1Q9NTJ4 1040 aa8.83□□□□□ -1
UBR4-201ENST00000375218 BARHL2Q9NY43 387 aa8.83□□□□□ -1
UBR4-201ENST00000375218 MLXQ9UH92 298 aa8.83□□□□□ -1
UBR4-201ENST00000375218 L3MBTL1Q9Y468 752 aa8.83□□□□□ -1
UBR4-201ENST00000375218 KCNE2Q9Y6J6 123 aa8.83□□□□□ -1
UBR4-201ENST00000375218 PRAMEF27A3QJZ7 478 aa8.83□□□□□ -1
UBR4-201ENST00000375218 PRAMEF25A6NGN4 478 aa8.83□□□□□ -1
UBR4-201ENST00000375218 PRAMEF26H0Y7S4 382 aa8.83□□□□□ -1
UBR4-201ENST00000375218 SLC33A1O00400 549 aaPredicted RBP8.83□□□□□ -1
UBR4-201ENST00000375218 PEX12O00623 359 aa8.83□□□□□ -1
UBR4-201ENST00000375218 HS3ST1O14792 307 aa8.83□□□□□ -1
UBR4-201ENST00000375218 HBP1O60381 514 aa8.83□□□□□ -1
UBR4-201ENST00000375218 PRAMEF4O60810 478 aa8.83□□□□□ -1
UBR4-201ENST00000375218 PRAMEF11O60813 436 aa8.83□□□□□ -1
UBR4-201ENST00000375218 F9P00740 461 aa8.83□□□□□ -1
UBR4-201ENST00000375218 TMEM253P0C7T8 217 aa8.83□□□□□ -1
UBR4-201ENST00000375218 MARCKSP29966 332 aaPredicted RBP8.83□□□□□ -1
UBR4-201ENST00000375218 OMPP47874 163 aa8.83□□□□□ -1
UBR4-201ENST00000375218 UCP2P55851 309 aa8.83□□□□□ -1
UBR4-201ENST00000375218 ACTR2P61160 394 aa8.83□□□□□ -1
UBR4-201ENST00000375218 SPP2Q13103 211 aa8.83□□□□□ -1
UBR4-201ENST00000375218 SLC18A3Q16572 532 aa8.83□□□□□ -1
UBR4-201ENST00000375218 PRAMEF5Q5TYX0 476 aa8.83□□□□□ -1
UBR4-201ENST00000375218 PRAMEF9Q5VWM5 478 aa8.83□□□□□ -1
UBR4-201ENST00000375218 PRAMEF6Q5VXH4 476 aa8.83□□□□□ -1
UBR4-201ENST00000375218 CDCP2Q5VXM1 449 aa8.83□□□□□ -1
UBR4-201ENST00000375218 C3orf62Q6ZUJ4 267 aa8.83□□□□□ -1
UBR4-201ENST00000375218 UTS2BQ765I0 119 aa8.83□□□□□ -1
UBR4-201ENST00000375218 METTL25Q8N6Q8 603 aa8.83□□□□□ -1
UBR4-201ENST00000375218 STKLD1Q8NE28 680 aa8.83□□□□□ -1
UBR4-201ENST00000375218 OR52J3Q8NH60 311 aa8.83□□□□□ -1
UBR4-201ENST00000375218 RASSF5Q8WWW0 418 aa8.83□□□□□ -1
UBR4-201ENST00000375218 TMCO6Q96DC7 493 aa8.83□□□□□ -1
UBR4-201ENST00000375218 OXNAD1Q96HP4 312 aaPredicted RBP8.83□□□□□ -1
UBR4-201ENST00000375218 HHIPQ96QV1 700 aa8.83□□□□□ -1
UBR4-201ENST00000375218 LRRC3Q9BY71 257 aa8.83□□□□□ -1
UBR4-201ENST00000375218 POLR1EQ9GZS1 481 aaKnown RBP8.83□□□□□ -1
UBR4-201ENST00000375218 KCNN2Q9H2S1 579 aa8.83□□□□□ -1
UBR4-201ENST00000375218 POFUT1Q9H488 388 aa8.83□□□□□ -1
UBR4-201ENST00000375218 TMEM8AQ9HCN3 771 aa8.83□□□□□ -1
UBR4-201ENST00000375218 BCAP29Q9UHQ4 241 aa8.83□□□□□ -1
UBR4-201ENST00000375218 RAPGEFL1Q9UHV5 662 aa8.83□□□□□ -1
UBR4-201ENST00000375218 DAPP1Q9UN19 280 aa8.83□□□□□ -1
UBR4-201ENST00000375218 MIF4GDA9UHW6 222 aaKnown RBP8.83□□□□□ -1
UBR4-201ENST00000375218 FBP2O00757 339 aa8.83□□□□□ -1
UBR4-201ENST00000375218 RHOBTB1O94844 696 aa8.83□□□□□ -1
UBR4-201ENST00000375218 ZBTB11O95625 1053 aaPredicted RBP8.83□□□□□ -1
UBR4-201ENST00000375218 LCATP04180 440 aa8.83□□□□□ -1
UBR4-201ENST00000375218 CRYGCP07315 174 aa8.83□□□□□ -1
UBR4-201ENST00000375218 SNRPB2P08579 225 aaKnown RBP8.83□□□□□ -1
UBR4-201ENST00000375218 H2AFB2P0C5Z0 115 aa8.83□□□□□ -1
UBR4-201ENST00000375218 CST5P28325 142 aaPredicted RBP8.83□□□□□ -1
UBR4-201ENST00000375218 VIPR1P32241 457 aa8.83□□□□□ -1
UBR4-201ENST00000375218 MSX2P35548 267 aaPredicted RBP8.83□□□□□ -1
UBR4-201ENST00000375218 FKBP1AP62942 108 aaKnown RBP8.83□□□□□ -1
UBR4-201ENST00000375218 PPIGQ13427 754 aaKnown RBP eCLIP8.83□□□□□ -14e-9■■■□□ 17.6
UBR4-201ENST00000375218 PRAMEF18Q5VWM3 479 aa8.83□□□□□ -1
UBR4-201ENST00000375218 DPP8Q6V1X1 898 aaPredicted RBP8.83□□□□□ -1
UBR4-201ENST00000375218 IDO2Q6ZQW0 420 aa8.83□□□□□ -1
UBR4-201ENST00000375218 IL17RCQ8NAC3 791 aa8.83□□□□□ -1
UBR4-201ENST00000375218 EPN3Q9H201 632 aa8.83□□□□□ -1
UBR4-201ENST00000375218 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.83□□□□□ -1
UBR4-201ENST00000375218 COL20A1Q9P218 1284 aa8.83□□□□□ -1
UBR4-201ENST00000375218 TMEM59LQ9UK28 342 aa8.83□□□□□ -1
UBR4-201ENST00000375218 KLK4Q9Y5K2 254 aa8.83□□□□□ -1
UBR4-201ENST00000375218 GABRR3A8MPY1 467 aa8.82□□□□□ -1
UBR4-201ENST00000375218 KLRC4O43908 158 aa8.82□□□□□ -1
UBR4-201ENST00000375218 GRK5P34947 590 aa8.82□□□□□ -1
UBR4-201ENST00000375218 VIPR2P41587 438 aa8.82□□□□□ -1
UBR4-201ENST00000375218 TCP10Q12799 353 aa8.82□□□□□ -1
UBR4-201ENST00000375218 INPP5AQ14642 412 aa8.82□□□□□ -1
UBR4-201ENST00000375218 MPPE1Q53F39 396 aa8.82□□□□□ -1
UBR4-201ENST00000375218 LUZP2Q86TE4 346 aa8.82□□□□□ -1
UBR4-201ENST00000375218 CPNE8Q86YQ8 564 aa8.82□□□□□ -1
UBR4-201ENST00000375218 IRF2BP1Q8IU81 584 aa8.82□□□□□ -1
UBR4-201ENST00000375218 CFAP206Q8IYR0 622 aa8.82□□□□□ -1
UBR4-201ENST00000375218 CAMKVQ8NCB2 501 aa8.82□□□□□ -1
UBR4-201ENST00000375218 CYP2W1Q8TAV3 490 aa8.82□□□□□ -1
UBR4-201ENST00000375218 FBXO17Q96EF6 278 aa8.82□□□□□ -1
UBR4-201ENST00000375218 DGAT2Q96PD7 388 aa8.82□□□□□ -1
UBR4-201ENST00000375218 DHX33Q9H6R0 707 aaKnown RBP8.82□□□□□ -1
UBR4-201ENST00000375218 ARPP21Q9UBL0 812 aaPredicted RBP8.82□□□□□ -1
UBR4-201ENST00000375218 EIF3KQ9UBQ5 218 aaKnown RBP8.82□□□□□ -1
UBR4-201ENST00000375218 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.82□□□□□ -1
UBR4-201ENST00000375218 PUS1Q9Y606 427 aaKnown RBP eCLIP8.82□□□□□ -1
UBR4-201ENST00000375218 SCN4AP35499 1836 aa8.82□□□□□ -1
UBR4-201ENST00000375218 A0A0J9YVX5 310 aa8.82□□□□□ -1
UBR4-201ENST00000375218 TRBC2A0A5B9 178 aa8.82□□□□□ -1
UBR4-201ENST00000375218 CLDN4O14493 209 aa8.82□□□□□ -1
UBR4-201ENST00000375218 AIM2O14862 343 aa8.82□□□□□ -1
UBR4-201ENST00000375218 BNIP3LO60238 219 aa8.82□□□□□ -1
UBR4-201ENST00000375218 ATG13O75143 517 aa8.82□□□□□ -1
UBR4-201ENST00000375218 FAM155BO75949 473 aa8.82□□□□□ -1
UBR4-201ENST00000375218 IPO13O94829 963 aaKnown RBP8.82□□□□□ -1
UBR4-201ENST00000375218 ACPPP15309 386 aa8.82□□□□□ -1
UBR4-201ENST00000375218 RCAN2Q14206 197 aa8.82□□□□□ -1
UBR4-201ENST00000375218 PTPRRQ15256 657 aa8.82□□□□□ -1
UBR4-201ENST00000375218 CERKLQ49MI3 558 aaPredicted RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms