RNA–Protein interactions for RNA: ENST00000374876.4

CCDC40-202, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best) BASIC

Gene CCDC40, Length 2,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-202ENST00000374876 GOLGA7Q7Z5G4 137 aa15.19■□□□□ 0.02
CCDC40-202ENST00000374876 NAT14Q8WUY8 206 aa15.19■□□□□ 0.02
CCDC40-202ENST00000374876 CANT1Q8WVQ1 401 aa15.19■□□□□ 0.02
CCDC40-202ENST00000374876 CCDC97Q96F63 343 aaPredicted RBP15.19■□□□□ 0.02
CCDC40-202ENST00000374876 IL26Q9NPH9 171 aa15.19■□□□□ 0.02
CCDC40-202ENST00000374876 ARMC1Q9NVT9 282 aa15.19■□□□□ 0.02
CCDC40-202ENST00000374876 EGFL7Q9UHF1 273 aa15.19■□□□□ 0.02
CCDC40-202ENST00000374876 INVSQ9Y283 1065 aa15.19■□□□□ 0.02
CCDC40-202ENST00000374876 GLYATL1P3A0A0U1RQE8 302 aa15.19■□□□□ 0.02
CCDC40-202ENST00000374876 AQP12BA6NM10 295 aa15.19■□□□□ 0.02
CCDC40-202ENST00000374876 GAPDHSO14556 408 aaPredicted RBP15.19■□□□□ 0.02
CCDC40-202ENST00000374876 AKAP10O43572 662 aa15.19■□□□□ 0.02
CCDC40-202ENST00000374876 EEDO75530 441 aaKnown RBP15.19■□□□□ 0.02
CCDC40-202ENST00000374876 ZNF821O75541 412 aaPredicted RBP15.19■□□□□ 0.02
CCDC40-202ENST00000374876 TIPRLO75663 272 aa15.19■□□□□ 0.02
CCDC40-202ENST00000374876 TRIM16O95361 564 aa15.19■□□□□ 0.02
CCDC40-202ENST00000374876 TNFAIP8O95379 198 aa15.19■□□□□ 0.02
CCDC40-202ENST00000374876 IGSF6O95976 241 aa15.19■□□□□ 0.02
CCDC40-202ENST00000374876 CAPN1P07384 714 aa15.19■□□□□ 0.02
CCDC40-202ENST00000374876 NDUFV2P19404 249 aa15.19■□□□□ 0.02
CCDC40-202ENST00000374876 CASP2P42575 452 aa15.19■□□□□ 0.02
CCDC40-202ENST00000374876 CSNK1DP48730 415 aa15.19■□□□□ 0.02
CCDC40-202ENST00000374876 CAMK2GQ13555 558 aaPredicted RBP15.19■□□□□ 0.02
CCDC40-202ENST00000374876 GTF2H2Q13888 395 aa15.19■□□□□ 0.02
CCDC40-202ENST00000374876 C18orf21Q32NC0 220 aaPredicted RBP15.19■□□□□ 0.02
CCDC40-202ENST00000374876 LYPLAL1Q5VWZ2 237 aa15.19■□□□□ 0.02
CCDC40-202ENST00000374876 GTF2H2CQ6P1K8 395 aa15.19■□□□□ 0.02
CCDC40-202ENST00000374876 IL27RAQ6UWB1 636 aa15.19■□□□□ 0.02
CCDC40-202ENST00000374876 AMIGO2Q86SJ2 522 aa15.19■□□□□ 0.02
CCDC40-202ENST00000374876 METTL3Q86U44 580 aaKnown RBP15.19■□□□□ 0.02
CCDC40-202ENST00000374876 SPPL2CQ8IUH8 684 aa15.19■□□□□ 0.02
CCDC40-202ENST00000374876 AQP12AQ8IXF9 295 aa15.19■□□□□ 0.02
CCDC40-202ENST00000374876 CLDN19Q8N6F1 224 aa15.19■□□□□ 0.02
CCDC40-202ENST00000374876 DNAJB14Q8TBM8 379 aa15.19■□□□□ 0.02
CCDC40-202ENST00000374876 MRGPRX1Q96LB2 322 aa15.19■□□□□ 0.02
CCDC40-202ENST00000374876 FAM126AQ9BYI3 521 aaPredicted RBP15.19■□□□□ 0.02
CCDC40-202ENST00000374876 ZIM2Q9NZV7 527 aa15.19■□□□□ 0.02
CCDC40-202ENST00000374876 ACTR3BQ9P1U1 418 aa15.19■□□□□ 0.02
CCDC40-202ENST00000374876 CRLS1Q9UJA2 301 aa15.19■□□□□ 0.02
CCDC40-202ENST00000374876 LEF1Q9UJU2 399 aaPredicted RBP15.19■□□□□ 0.02
CCDC40-202ENST00000374876 AK5Q9Y6K8 562 aa15.19■□□□□ 0.02
CCDC40-202ENST00000374876 EDDM13A0A1B0GTR0 161 aa15.18■□□□□ 0.02
CCDC40-202ENST00000374876 AHCYL1O43865 530 aa15.18■□□□□ 0.02
CCDC40-202ENST00000374876 SLC25A14O95258 325 aaPredicted RBP15.18■□□□□ 0.02
CCDC40-202ENST00000374876 GUCA1CO95843 209 aa15.18■□□□□ 0.02
CCDC40-202ENST00000374876 OTCP00480 354 aa15.18■□□□□ 0.02
CCDC40-202ENST00000374876 DGKAP23743 735 aa15.18■□□□□ 0.02
CCDC40-202ENST00000374876 ACRV1P26436 265 aa15.18■□□□□ 0.02
CCDC40-202ENST00000374876 SERPINA4P29622 427 aa15.18■□□□□ 0.02
CCDC40-202ENST00000374876 SRSF5Q13243 272 aaKnown RBP15.18■□□□□ 0.02
CCDC40-202ENST00000374876 FRMD1Q8N878 549 aa15.18■□□□□ 0.02
CCDC40-202ENST00000374876 RLN3Q8WXF3 142 aa15.18■□□□□ 0.02
CCDC40-202ENST00000374876 ZNF597Q96LX8 424 aa15.18■□□□□ 0.02
CCDC40-202ENST00000374876 PRRX2Q99811 253 aa15.18■□□□□ 0.02
CCDC40-202ENST00000374876 C19orf43Q9BQ61 176 aa15.18■□□□□ 0.02
CCDC40-202ENST00000374876 CD93Q9NPY3 652 aa15.18■□□□□ 0.02
CCDC40-202ENST00000374876 CCM2LQ9NUG4 571 aaPredicted RBP15.18■□□□□ 0.02
CCDC40-202ENST00000374876 AURKCQ9UQB9 309 aa15.18■□□□□ 0.02
CCDC40-202ENST00000374876 PCDHA9Q9Y5H5 950 aa15.18■□□□□ 0.02
CCDC40-202ENST00000374876 CKAP5Q14008 2032 aa15.18■□□□□ 0.02
CCDC40-202ENST00000374876 DHRS12A0PJE2 317 aa15.17■□□□□ 0.02
CCDC40-202ENST00000374876 FAM234BA2RU67 622 aa15.17■□□□□ 0.02
CCDC40-202ENST00000374876 ASPDHA6ND91 283 aa15.17■□□□□ 0.02
CCDC40-202ENST00000374876 A8MX80 341 aa15.17■□□□□ 0.02
CCDC40-202ENST00000374876 OR7A17O14581 309 aa15.17■□□□□ 0.02
CCDC40-202ENST00000374876 AXIN1O15169 862 aa15.17■□□□□ 0.02
CCDC40-202ENST00000374876 KATNA1O75449 491 aa15.17■□□□□ 0.02
CCDC40-202ENST00000374876 FAM58BPP0C7Q3 252 aa15.17■□□□□ 0.02
CCDC40-202ENST00000374876 BPIP17213 487 aa15.17■□□□□ 0.02
CCDC40-202ENST00000374876 UGT1A6P19224 532 aa15.17■□□□□ 0.02
CCDC40-202ENST00000374876 UGT1A1P22309 533 aa15.17■□□□□ 0.02
CCDC40-202ENST00000374876 UGT1A4P22310 534 aa15.17■□□□□ 0.02
CCDC40-202ENST00000374876 PSMA4P25789 261 aaKnown RBP15.17■□□□□ 0.02
CCDC40-202ENST00000374876 CA5AP35218 305 aa15.17■□□□□ 0.02
CCDC40-202ENST00000374876 UGT1A3P35503 534 aa15.17■□□□□ 0.02
CCDC40-202ENST00000374876 UGT1A5P35504 534 aa15.17■□□□□ 0.02
CCDC40-202ENST00000374876 VASPP50552 380 aaPredicted RBP15.17■□□□□ 0.02
CCDC40-202ENST00000374876 CLCN2P51788 898 aa15.17■□□□□ 0.02
CCDC40-202ENST00000374876 POLE2P56282 527 aa15.17■□□□□ 0.02
CCDC40-202ENST00000374876 TIGD2Q4W5G0 525 aa15.17■□□□□ 0.02
CCDC40-202ENST00000374876 TBCELQ5QJ74 424 aa15.17■□□□□ 0.02
CCDC40-202ENST00000374876 LCN8Q6JVE9 175 aa15.17■□□□□ 0.02
CCDC40-202ENST00000374876 HMBOX1Q6NT76 420 aa15.17■□□□□ 0.02
CCDC40-202ENST00000374876 KIAA1324Q6UXG2 1013 aaKnown RBP15.17■□□□□ 0.02
CCDC40-202ENST00000374876 Q6ZSR9 355 aa15.17■□□□□ 0.02
CCDC40-202ENST00000374876 PDPRQ8NCN5 879 aa15.17■□□□□ 0.02
CCDC40-202ENST00000374876 OR4F6Q8NGB9 312 aa15.17■□□□□ 0.02
CCDC40-202ENST00000374876 TMEM125Q96AQ2 219 aa15.17■□□□□ 0.02
CCDC40-202ENST00000374876 FAM129BQ96TA1 746 aa15.17■□□□□ 0.02
CCDC40-202ENST00000374876 CIB1Q99828 191 aa15.17■□□□□ 0.02
CCDC40-202ENST00000374876 SPATA16Q9BXB7 569 aa15.17■□□□□ 0.02
CCDC40-202ENST00000374876 ALG2Q9H553 416 aa15.17■□□□□ 0.02
CCDC40-202ENST00000374876 IPPKQ9H8X2 491 aa15.17■□□□□ 0.02
CCDC40-202ENST00000374876 FAM86C1Q9NVL1 165 aa15.17■□□□□ 0.02
CCDC40-202ENST00000374876 TMEM45AQ9NWC5 275 aa15.17■□□□□ 0.02
CCDC40-202ENST00000374876 EBF1Q9UH73 591 aa15.17■□□□□ 0.02
CCDC40-202ENST00000374876 PCDHGB4Q9UN71 923 aa15.17■□□□□ 0.02
CCDC40-202ENST00000374876 HCN4Q9Y3Q4 1203 aa15.17■□□□□ 0.02
CCDC40-202ENST00000374876 OARD1Q9Y530 152 aa15.17■□□□□ 0.02
CCDC40-202ENST00000374876 PCDHGB5Q9Y5G0 923 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms